RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 CEP170BQ9Y4F5 1589 aaPredicted RBP26.1■■□□□ 1.77
RAB11FIP3-209ENST00000483002 APLP2Q06481 763 aa26.08■■□□□ 1.77
RAB11FIP3-209ENST00000483002 ZNF142P52746 1687 aaPredicted RBP26.08■■□□□ 1.77
RAB11FIP3-209ENST00000483002 LTBP4Q8N2S1 1624 aa26.06■■□□□ 1.76
RAB11FIP3-209ENST00000483002 MYOM3Q5VTT5 1437 aa26.06■■□□□ 1.76
RAB11FIP3-209ENST00000483002 PLA2R1Q13018 1463 aa26.05■■□□□ 1.76
RAB11FIP3-209ENST00000483002 KDM5DQ9BY66 1539 aa26.05■■□□□ 1.76
RAB11FIP3-209ENST00000483002 TNRQ92752 1358 aa26.05■■□□□ 1.76
RAB11FIP3-209ENST00000483002 MIA2Q96PC5 1412 aa26.05■■□□□ 1.76
RAB11FIP3-209ENST00000483002 A2ML1A8K2U0 1454 aa26.04■■□□□ 1.76
RAB11FIP3-209ENST00000483002 ZNF335Q9H4Z2 1342 aaPredicted RBP26.03■■□□□ 1.76
RAB11FIP3-209ENST00000483002 PZPP20742 1482 aa26.02■■□□□ 1.76
RAB11FIP3-209ENST00000483002 TCOF1Q13428 1488 aaKnown RBP26.01■■□□□ 1.75
RAB11FIP3-209ENST00000483002 FAM135AQ9P2D6 1515 aa26■■□□□ 1.75
RAB11FIP3-209ENST00000483002 DNMT1P26358 1616 aaKnown RBP25.99■■□□□ 1.75
RAB11FIP3-209ENST00000483002 MAST1Q9Y2H9 1570 aa25.99■■□□□ 1.75
RAB11FIP3-209ENST00000483002 THEMISQ8N1K5 641 aaPredicted RBP25.94■■□□□ 1.74
RAB11FIP3-209ENST00000483002 IQSEC2Q5JU85 1478 aa25.93■■□□□ 1.74
RAB11FIP3-209ENST00000483002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.92■■□□□ 1.74
RAB11FIP3-209ENST00000483002 ANKLE2Q86XL3 938 aa25.91■■□□□ 1.74
RAB11FIP3-209ENST00000483002 RRP7BPQ9NSQ0 103 aa25.91■■□□□ 1.74
RAB11FIP3-209ENST00000483002 RNF17Q9BXT8 1623 aaKnown RBP25.91■■□□□ 1.74
RAB11FIP3-209ENST00000483002 ABCC3O15438 1527 aa25.89■■□□□ 1.74
RAB11FIP3-209ENST00000483002 NLRP1Q9C000 1473 aa25.89■■□□□ 1.73
RAB11FIP3-209ENST00000483002 ABCC5O15440 1437 aa25.88■■□□□ 1.73
RAB11FIP3-209ENST00000483002 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
RAB11FIP3-209ENST00000483002 DUOX2Q9NRD8 1548 aa25.88■■□□□ 1.73
RAB11FIP3-209ENST00000483002 KIF15Q9NS87 1388 aa25.87■■□□□ 1.73
RAB11FIP3-209ENST00000483002 UBAP1LF5GYI3 381 aa25.87■■□□□ 1.73
RAB11FIP3-209ENST00000483002 PTPN23Q9H3S7 1636 aa25.87■■□□□ 1.73
RAB11FIP3-209ENST00000483002 UGGT1Q9NYU2 1555 aa25.86■■□□□ 1.73
RAB11FIP3-209ENST00000483002 CFAP65Q6ZU64 1925 aaKnown RBP25.85■■□□□ 1.73
RAB11FIP3-209ENST00000483002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.84■■□□□ 1.739e-8■■□□□ 11.7
RAB11FIP3-209ENST00000483002 CHIC2Q9UKJ5 165 aa25.84■■□□□ 1.73
RAB11FIP3-209ENST00000483002 ZC3H13Q5T200 1668 aaKnown RBP25.83■■□□□ 1.73
RAB11FIP3-209ENST00000483002 POLR1AO95602 1720 aaPredicted RBP25.83■■□□□ 1.73
RAB11FIP3-209ENST00000483002 FGD6Q6ZV73 1430 aa25.83■■□□□ 1.73
RAB11FIP3-209ENST00000483002 MROH1Q8NDA8 1641 aa25.83■■□□□ 1.73
RAB11FIP3-209ENST00000483002 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
RAB11FIP3-209ENST00000483002 DAPK1P53355 1430 aa25.82■■□□□ 1.72
RAB11FIP3-209ENST00000483002 SHANK2Q9UPX8 1470 aa25.82■■□□□ 1.72
RAB11FIP3-209ENST00000483002 CEP152O94986 1710 aa25.8■■□□□ 1.72
RAB11FIP3-209ENST00000483002 ERVK-7P63135 1459 aa25.8■■□□□ 1.72
RAB11FIP3-209ENST00000483002 SPATA31D1Q6ZQQ2 1576 aa25.8■■□□□ 1.72
RAB11FIP3-209ENST00000483002 DISP3Q9P2K9 1392 aa25.8■■□□□ 1.72
RAB11FIP3-209ENST00000483002 CROCC2H7BZ55 1655 aa25.79■■□□□ 1.72
RAB11FIP3-209ENST00000483002 ERBINQ96RT1 1412 aa25.79■■□□□ 1.72
RAB11FIP3-209ENST00000483002 NPHP4O75161 1426 aaPredicted RBP25.77■■□□□ 1.72
RAB11FIP3-209ENST00000483002 ANKRD30AQ9BXX3 1397 aa25.75■■□□□ 1.71
RAB11FIP3-209ENST00000483002 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
RAB11FIP3-209ENST00000483002 MED14O60244 1454 aa25.73■■□□□ 1.71
RAB11FIP3-209ENST00000483002 KANK1Q14678 1352 aa25.73■■□□□ 1.71
RAB11FIP3-209ENST00000483002 DEPDC5O75140 1603 aa25.72■■□□□ 1.71
RAB11FIP3-209ENST00000483002 PRDM15P57071 1507 aaPredicted RBP25.72■■□□□ 1.71
RAB11FIP3-209ENST00000483002 ARHGAP31Q2M1Z3 1444 aa25.71■■□□□ 1.71
RAB11FIP3-209ENST00000483002 CPS1P31327 1500 aa25.71■■□□□ 1.71
RAB11FIP3-209ENST00000483002 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
RAB11FIP3-209ENST00000483002 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
RAB11FIP3-209ENST00000483002 TOM1O60784 492 aa25.68■■□□□ 1.7
RAB11FIP3-209ENST00000483002 VWDEQ8N2E2 1590 aa25.68■■□□□ 1.7
RAB11FIP3-209ENST00000483002 TXNDC2Q86VQ3 553 aa25.67■■□□□ 1.7
RAB11FIP3-209ENST00000483002 IQGAP1P46940 1657 aa25.67■■□□□ 1.7
RAB11FIP3-209ENST00000483002 ILDR2Q71H61 639 aa25.66■■□□□ 1.7
RAB11FIP3-209ENST00000483002 UBR1Q8IWV7 1749 aa25.66■■□□□ 1.7
RAB11FIP3-209ENST00000483002 LTKP29376 864 aa25.65■■□□□ 1.7
RAB11FIP3-209ENST00000483002 STAG3Q9UJ98 1225 aa25.65■■□□□ 1.7
RAB11FIP3-209ENST00000483002 EID1Q9Y6B2 187 aa25.62■■□□□ 1.69
RAB11FIP3-209ENST00000483002 SCAF11Q99590 1463 aaKnown RBP25.61■■□□□ 1.69
RAB11FIP3-209ENST00000483002 IDI1Q13907 227 aa25.6■■□□□ 1.69
RAB11FIP3-209ENST00000483002 HSPA1LP34931 641 aa25.59■■□□□ 1.69
RAB11FIP3-209ENST00000483002 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
RAB11FIP3-209ENST00000483002 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.69
RAB11FIP3-209ENST00000483002 LMTK2Q8IWU2 1503 aa25.58■■□□□ 1.68
RAB11FIP3-209ENST00000483002 SLIT1O75093 1534 aa25.57■■□□□ 1.68
RAB11FIP3-209ENST00000483002 PIK3C2BO00750 1634 aa25.56■■□□□ 1.68
RAB11FIP3-209ENST00000483002 ANKRD50Q9ULJ7 1429 aa25.55■■□□□ 1.68
RAB11FIP3-209ENST00000483002 STRCP1A6NGW2 1772 aa25.55■■□□□ 1.68
RAB11FIP3-209ENST00000483002 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
RAB11FIP3-209ENST00000483002 LRRC7Q96NW7 1537 aa25.53■■□□□ 1.68
RAB11FIP3-209ENST00000483002 NOS1P29475 1434 aa25.5■■□□□ 1.67
RAB11FIP3-209ENST00000483002 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
RAB11FIP3-209ENST00000483002 SLC52A1Q9NWF4 448 aa25.5■■□□□ 1.67
RAB11FIP3-209ENST00000483002 SYNMO15061 1565 aa25.49■■□□□ 1.67
RAB11FIP3-209ENST00000483002 EFCAB6Q5THR3 1501 aa25.49■■□□□ 1.67
RAB11FIP3-209ENST00000483002 SOCS7O14512 581 aa25.47■■□□□ 1.67
RAB11FIP3-209ENST00000483002 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
RAB11FIP3-209ENST00000483002 ALKQ9UM73 1620 aa25.46■■□□□ 1.67
RAB11FIP3-209ENST00000483002 ITGAEP38570 1179 aa25.46■■□□□ 1.67
RAB11FIP3-209ENST00000483002 SLC26A8Q96RN1 970 aa25.45■■□□□ 1.66
RAB11FIP3-209ENST00000483002 BCANQ96GW7 911 aa25.44■■□□□ 1.66
RAB11FIP3-209ENST00000483002 KDM5AP29375 1690 aaKnown RBP25.43■■□□□ 1.66
RAB11FIP3-209ENST00000483002 RPRD2Q5VT52 1461 aaKnown RBP25.41■■□□□ 1.66
RAB11FIP3-209ENST00000483002 ADGRB3O60242 1522 aa25.39■■□□□ 1.66
RAB11FIP3-209ENST00000483002 KCNA6P17658 529 aa25.39■■□□□ 1.66
RAB11FIP3-209ENST00000483002 ROCK1Q13464 1354 aa25.39■■□□□ 1.65
RAB11FIP3-209ENST00000483002 TET3O43151 1660 aa25.38■■□□□ 1.65
RAB11FIP3-209ENST00000483002 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
RAB11FIP3-209ENST00000483002 PROSER2Q86WR7 435 aaPredicted RBP25.36■■□□□ 1.65
RAB11FIP3-209ENST00000483002 HDGFP51858 240 aaKnown RBP25.35■■□□□ 1.65
RAB11FIP3-209ENST00000483002 RBM33Q96EV2 1170 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms