RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 TNRQ92752 1358 aa28.15■■■□□ 2.1
RXRB-203ENST00000481441 FBXO31Q5XUX0 539 aaPredicted RBP28.15■■■□□ 2.1
RXRB-203ENST00000481441 EHBP1L1Q8N3D4 1523 aa28.14■■■□□ 2.1
RXRB-203ENST00000481441 SHANK2Q9UPX8 1470 aa28.14■■■□□ 2.1
RXRB-203ENST00000481441 HSPA1LP34931 641 aa28.14■■■□□ 2.09
RXRB-203ENST00000481441 PZPP20742 1482 aa28.13■■■□□ 2.09
RXRB-203ENST00000481441 MED1Q15648 1581 aaPredicted RBP28.13■■■□□ 2.09
RXRB-203ENST00000481441 FAM135AQ9P2D6 1515 aa28.13■■■□□ 2.09
RXRB-203ENST00000481441 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
RXRB-203ENST00000481441 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
RXRB-203ENST00000481441 KIF3BO15066 747 aa28.1■■■□□ 2.09
RXRB-203ENST00000481441 TOM1O60784 492 aa28.1■■■□□ 2.09
RXRB-203ENST00000481441 PIP4K2BP78356 416 aa28.1■■■□□ 2.09
RXRB-203ENST00000481441 SCAF1Q9H7N4 1312 aaKnown RBP28.09■■■□□ 2.09
RXRB-203ENST00000481441 VWDEQ8N2E2 1590 aa28.07■■■□□ 2.08
RXRB-203ENST00000481441 CCDC141Q6ZP82 1450 aa28.06■■■□□ 2.08
RXRB-203ENST00000481441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.05■■■□□ 2.08
RXRB-203ENST00000481441 ANKLE2Q86XL3 938 aa28.04■■■□□ 2.08
RXRB-203ENST00000481441 MIA2Q96PC5 1412 aa28.03■■■□□ 2.08
RXRB-203ENST00000481441 NLRP1Q9C000 1473 aa28.03■■■□□ 2.08
RXRB-203ENST00000481441 WASHC2CQ9Y4E1 1318 aa28.03■■■□□ 2.08
RXRB-203ENST00000481441 DEPDC5O75140 1603 aa28.03■■■□□ 2.08
RXRB-203ENST00000481441 ALKQ9UM73 1620 aa28.03■■■□□ 2.08
RXRB-203ENST00000481441 MED14O60244 1454 aa28.02■■■□□ 2.08
RXRB-203ENST00000481441 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
RXRB-203ENST00000481441 THEMISQ8N1K5 641 aaPredicted RBP28.02■■■□□ 2.08
RXRB-203ENST00000481441 UGGT1Q9NYU2 1555 aa28■■■□□ 2.07
RXRB-203ENST00000481441 NPHP4O75161 1426 aaPredicted RBP28■■■□□ 2.07
RXRB-203ENST00000481441 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
RXRB-203ENST00000481441 NCOA2Q15596 1464 aa27.98■■■□□ 2.07
RXRB-203ENST00000481441 IQGAP1P46940 1657 aa27.96■■■□□ 2.07
RXRB-203ENST00000481441 ARHGEF5Q12774 1597 aa27.95■■■□□ 2.06
RXRB-203ENST00000481441 STRCP1A6NGW2 1772 aa27.93■■■□□ 2.06
RXRB-203ENST00000481441 RNF17Q9BXT8 1623 aaKnown RBP27.91■■■□□ 2.06
RXRB-203ENST00000481441 ABCC3O15438 1527 aa27.88■■■□□ 2.05
RXRB-203ENST00000481441 LRRC7Q96NW7 1537 aa27.88■■■□□ 2.05
RXRB-203ENST00000481441 ZC3H13Q5T200 1668 aaKnown RBP27.88■■■□□ 2.05
RXRB-203ENST00000481441 TSPY4P0CV99 314 aa27.87■■■□□ 2.05
RXRB-203ENST00000481441 TSPY10P0CW01 314 aa27.87■■■□□ 2.05
RXRB-203ENST00000481441 SYNMO15061 1565 aa27.86■■■□□ 2.05
RXRB-203ENST00000481441 PHF23Q9BUL5 403 aaPredicted RBP27.85■■■□□ 2.05
RXRB-203ENST00000481441 MAST1Q9Y2H9 1570 aa27.83■■■□□ 2.05
RXRB-203ENST00000481441 ERVK-7P63135 1459 aa27.83■■■□□ 2.05
RXRB-203ENST00000481441 EIF2AK4Q9P2K8 1649 aaKnown RBP27.81■■■□□ 2.04
RXRB-203ENST00000481441 MROH1Q8NDA8 1641 aa27.81■■■□□ 2.04
RXRB-203ENST00000481441 UBR1Q8IWV7 1749 aa27.8■■■□□ 2.04
RXRB-203ENST00000481441 CFAP65Q6ZU64 1925 aaKnown RBP27.78■■■□□ 2.04
RXRB-203ENST00000481441 CEP152O94986 1710 aa27.77■■■□□ 2.04
RXRB-203ENST00000481441 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
RXRB-203ENST00000481441 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
RXRB-203ENST00000481441 XIRP1Q702N8 1843 aaKnown RBP27.72■■■□□ 2.03
RXRB-203ENST00000481441 LRRC9Q6ZRR7 1453 aa27.72■■■□□ 2.03
RXRB-203ENST00000481441 ARHGAP23Q9P227 1491 aa27.72■■■□□ 2.03
RXRB-203ENST00000481441 SLIT1O75093 1534 aa27.7■■■□□ 2.02
RXRB-203ENST00000481441 LTKP29376 864 aa27.68■■■□□ 2.02
RXRB-203ENST00000481441 DUOX2Q9NRD8 1548 aa27.66■■■□□ 2.02
RXRB-203ENST00000481441 RGS17Q9UGC6 210 aaPredicted RBP27.66■■■□□ 2.02
RXRB-203ENST00000481441 TXNDC2Q86VQ3 553 aa27.65■■■□□ 2.02
RXRB-203ENST00000481441 ARHGAP31Q2M1Z3 1444 aa27.64■■■□□ 2.01
RXRB-203ENST00000481441 PRDM15P57071 1507 aaPredicted RBP27.63■■■□□ 2.01
RXRB-203ENST00000481441 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
RXRB-203ENST00000481441 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
RXRB-203ENST00000481441 PIK3C2BO00750 1634 aa27.59■■■□□ 2.01
RXRB-203ENST00000481441 KANK4Q5T7N3 995 aaPredicted RBP27.58■■■□□ 2.01
RXRB-203ENST00000481441 EID1Q9Y6B2 187 aa27.57■■■□□ 2
RXRB-203ENST00000481441 FAM135BQ49AJ0 1406 aa27.57■■■□□ 2
RXRB-203ENST00000481441 MAP3K1Q13233 1512 aa27.55■■■□□ 2
RXRB-203ENST00000481441 TMEM2Q9UHN6 1383 aa27.55■■■□□ 2
RXRB-203ENST00000481441 KIF15Q9NS87 1388 aa27.54■■■□□ 2
RXRB-203ENST00000481441 ERBINQ96RT1 1412 aa27.54■■■□□ 2
RXRB-203ENST00000481441 CROCC2H7BZ55 1655 aa27.53■■■□□ 2
RXRB-203ENST00000481441 KDM5AP29375 1690 aaKnown RBP27.53■■■□□ 2
RXRB-203ENST00000481441 TMEM94Q12767 1356 aa27.5■■□□□ 1.99
RXRB-203ENST00000481441 ABCC5O15440 1437 aa27.49■■□□□ 1.99
RXRB-203ENST00000481441 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
RXRB-203ENST00000481441 RRP7BPQ9NSQ0 103 aa27.48■■□□□ 1.99
RXRB-203ENST00000481441 TET3O43151 1660 aa27.47■■□□□ 1.99
RXRB-203ENST00000481441 ROBO1Q9Y6N7 1651 aa27.47■■□□□ 1.99
RXRB-203ENST00000481441 KCNA6P17658 529 aa27.46■■□□□ 1.99
RXRB-203ENST00000481441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.992e-8■□□□□ 10.9
RXRB-203ENST00000481441 POTEAQ6S8J7 498 aa27.45■■□□□ 1.99
RXRB-203ENST00000481441 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.99
RXRB-203ENST00000481441 IDI1Q13907 227 aa27.44■■□□□ 1.98
RXRB-203ENST00000481441 LMTK2Q8IWU2 1503 aa27.44■■□□□ 1.98
RXRB-203ENST00000481441 KANK1Q14678 1352 aa27.43■■□□□ 1.98
RXRB-203ENST00000481441 PTPN23Q9H3S7 1636 aa27.42■■□□□ 1.98
RXRB-203ENST00000481441 PROSER2Q86WR7 435 aaPredicted RBP27.41■■□□□ 1.98
RXRB-203ENST00000481441 SLC26A8Q96RN1 970 aa27.41■■□□□ 1.98
RXRB-203ENST00000481441 NWD1Q149M9 1564 aa27.4■■□□□ 1.98
RXRB-203ENST00000481441 DAPK1P53355 1430 aa27.4■■□□□ 1.98
RXRB-203ENST00000481441 RBM33Q96EV2 1170 aaKnown RBP27.39■■□□□ 1.97
RXRB-203ENST00000481441 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
RXRB-203ENST00000481441 NOS1P29475 1434 aa27.37■■□□□ 1.97
RXRB-203ENST00000481441 ADGRB3O60242 1522 aa27.36■■□□□ 1.97
RXRB-203ENST00000481441 LOC105371045A0A1W2PR82 267 aa27.34■■□□□ 1.97
RXRB-203ENST00000481441 ANKRD30AQ9BXX3 1397 aa27.31■■□□□ 1.96
RXRB-203ENST00000481441 PHLPP1O60346 1717 aa27.31■■□□□ 1.96
RXRB-203ENST00000481441 MSH6P52701 1360 aa27.3■■□□□ 1.96
RXRB-203ENST00000481441 FGD6Q6ZV73 1430 aa27.3■■□□□ 1.96
RXRB-203ENST00000481441 SETD1AO15047 1707 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms