RNA–Protein interactions for RNA: ENST00000481368.5

SNHG12-209, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-209ENST00000481368 RNF17Q9BXT8 1623 aaKnown RBP22.51■■□□□ 1.19
SNHG12-209ENST00000481368 MROH1Q8NDA8 1641 aa22.5■■□□□ 1.19
SNHG12-209ENST00000481368 KDM5DQ9BY66 1539 aa22.5■■□□□ 1.19
SNHG12-209ENST00000481368 MYO3AQ8NEV4 1616 aa22.48■■□□□ 1.19
SNHG12-209ENST00000481368 EIF2AK4Q9P2K8 1649 aaKnown RBP22.48■■□□□ 1.19
SNHG12-209ENST00000481368 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
SNHG12-209ENST00000481368 FAM135AQ9P2D6 1515 aa22.46■■□□□ 1.19
SNHG12-209ENST00000481368 KIF15Q9NS87 1388 aa22.45■■□□□ 1.18
SNHG12-209ENST00000481368 ZNF142P52746 1687 aaPredicted RBP22.45■■□□□ 1.18
SNHG12-209ENST00000481368 ILDR1Q86SU0 546 aaPredicted RBP22.45■■□□□ 1.18
SNHG12-209ENST00000481368 WASHC2CQ9Y4E1 1318 aa22.44■■□□□ 1.18
SNHG12-209ENST00000481368 FBXO31Q5XUX0 539 aaPredicted RBP22.44■■□□□ 1.18
SNHG12-209ENST00000481368 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
SNHG12-209ENST00000481368 PZPP20742 1482 aa22.43■■□□□ 1.18
SNHG12-209ENST00000481368 ABCC3O15438 1527 aa22.42■■□□□ 1.18
SNHG12-209ENST00000481368 CEP170BQ9Y4F5 1589 aaPredicted RBP22.42■■□□□ 1.18
SNHG12-209ENST00000481368 CHIC2Q9UKJ5 165 aa22.42■■□□□ 1.18
SNHG12-209ENST00000481368 CAMSAP1Q5T5Y3 1602 aa22.41■■□□□ 1.18
SNHG12-209ENST00000481368 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
SNHG12-209ENST00000481368 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
SNHG12-209ENST00000481368 CEP152O94986 1710 aa22.4■■□□□ 1.18
SNHG12-209ENST00000481368 ZC3H13Q5T200 1668 aaKnown RBP22.39■■□□□ 1.18
SNHG12-209ENST00000481368 ERBINQ96RT1 1412 aa22.39■■□□□ 1.17
SNHG12-209ENST00000481368 FAM50AQ14320 339 aaKnown RBP22.38■■□□□ 1.17
SNHG12-209ENST00000481368 PRDM15P57071 1507 aaPredicted RBP22.37■■□□□ 1.17
SNHG12-209ENST00000481368 ADGRL2O95490 1459 aa22.36■■□□□ 1.17
SNHG12-209ENST00000481368 DEPDC5O75140 1603 aa22.36■■□□□ 1.17
SNHG12-209ENST00000481368 TNRQ92752 1358 aa22.35■■□□□ 1.17
SNHG12-209ENST00000481368 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
SNHG12-209ENST00000481368 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
SNHG12-209ENST00000481368 CFAP65Q6ZU64 1925 aaKnown RBP22.34■■□□□ 1.17
SNHG12-209ENST00000481368 PTPRTO14522 1441 aa22.32■■□□□ 1.16
SNHG12-209ENST00000481368 PLA2R1Q13018 1463 aa22.31■■□□□ 1.16
SNHG12-209ENST00000481368 SPATA31D1Q6ZQQ2 1576 aa22.31■■□□□ 1.16
SNHG12-209ENST00000481368 NCKAP5LQ9HCH0 1330 aa22.3■■□□□ 1.16
SNHG12-209ENST00000481368 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
SNHG12-209ENST00000481368 ERVK-7P63135 1459 aa22.29■■□□□ 1.16
SNHG12-209ENST00000481368 VWDEQ8N2E2 1590 aa22.28■■□□□ 1.16
SNHG12-209ENST00000481368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.155e-7■■■□□ 16.9
SNHG12-209ENST00000481368 NLRP1Q9C000 1473 aa22.25■■□□□ 1.15
SNHG12-209ENST00000481368 ARHGAP31Q2M1Z3 1444 aa22.24■■□□□ 1.15
SNHG12-209ENST00000481368 FBXO41Q8TF61 875 aa22.24■■□□□ 1.15
SNHG12-209ENST00000481368 CERKQ8TCT0 537 aa22.23■■□□□ 1.15
SNHG12-209ENST00000481368 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
SNHG12-209ENST00000481368 LTBP4Q8N2S1 1624 aa22.22■■□□□ 1.15
SNHG12-209ENST00000481368 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
SNHG12-209ENST00000481368 UGGT1Q9NYU2 1555 aa22.22■■□□□ 1.15
SNHG12-209ENST00000481368 LMTK2Q8IWU2 1503 aa22.22■■□□□ 1.15
SNHG12-209ENST00000481368 POLR1AO95602 1720 aaPredicted RBP22.21■■□□□ 1.15
SNHG12-209ENST00000481368 PKD2Q13563 968 aa22.21■■□□□ 1.15
SNHG12-209ENST00000481368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.151e-7■■□□□ 13.9
SNHG12-209ENST00000481368 ROCK1Q13464 1354 aa22.18■■□□□ 1.14
SNHG12-209ENST00000481368 UBR1Q8IWV7 1749 aa22.17■■□□□ 1.14
SNHG12-209ENST00000481368 KANK1Q14678 1352 aa22.17■■□□□ 1.14
SNHG12-209ENST00000481368 EFCAB6Q5THR3 1501 aa22.17■■□□□ 1.14
SNHG12-209ENST00000481368 ITGAEP38570 1179 aa22.16■■□□□ 1.14
SNHG12-209ENST00000481368 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
SNHG12-209ENST00000481368 ZNF335Q9H4Z2 1342 aaPredicted RBP22.15■■□□□ 1.14
SNHG12-209ENST00000481368 UNC13BO14795 1591 aa22.14■■□□□ 1.14
SNHG12-209ENST00000481368 SYNMO15061 1565 aa22.14■■□□□ 1.13
SNHG12-209ENST00000481368 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
SNHG12-209ENST00000481368 PIK3C2BO00750 1634 aa22.12■■□□□ 1.13
SNHG12-209ENST00000481368 NOS1P29475 1434 aa22.1■■□□□ 1.13
SNHG12-209ENST00000481368 ANKLE2Q86XL3 938 aa22.09■■□□□ 1.13
SNHG12-209ENST00000481368 MED14O60244 1454 aa22.09■■□□□ 1.13
SNHG12-209ENST00000481368 TET3O43151 1660 aa22.09■■□□□ 1.13
SNHG12-209ENST00000481368 ARHGAP23Q9P227 1491 aa22.06■■□□□ 1.12
SNHG12-209ENST00000481368 GCC2Q8IWJ2 1684 aa22.06■■□□□ 1.12
SNHG12-209ENST00000481368 IDI1Q13907 227 aa22.06■■□□□ 1.12
SNHG12-209ENST00000481368 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
SNHG12-209ENST00000481368 IQGAP1P46940 1657 aa22.05■■□□□ 1.12
SNHG12-209ENST00000481368 IQGAP3Q86VI3 1631 aa22.05■■□□□ 1.12
SNHG12-209ENST00000481368 SLIT1O75093 1534 aa22.05■■□□□ 1.12
SNHG12-209ENST00000481368 E9PCH4 1651 aa22.05■■□□□ 1.12
SNHG12-209ENST00000481368 RPRD2Q5VT52 1461 aaKnown RBP22.04■■□□□ 1.12
SNHG12-209ENST00000481368 LTKP29376 864 aa22.04■■□□□ 1.12
SNHG12-209ENST00000481368 KDM5AP29375 1690 aaKnown RBP22.02■■□□□ 1.12
SNHG12-209ENST00000481368 SCAF11Q99590 1463 aaKnown RBP22.01■■□□□ 1.11
SNHG12-209ENST00000481368 IQSEC2Q5JU85 1478 aa22■■□□□ 1.11
SNHG12-209ENST00000481368 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
SNHG12-209ENST00000481368 MYO5BQ9ULV0 1848 aa21.99■■□□□ 1.11
SNHG12-209ENST00000481368 NUP155O75694 1391 aa21.99■■□□□ 1.11
SNHG12-209ENST00000481368 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
SNHG12-209ENST00000481368 ADGRB3O60242 1522 aa21.98■■□□□ 1.11
SNHG12-209ENST00000481368 NAIPQ13075 1403 aa21.98■■□□□ 1.11
SNHG12-209ENST00000481368 TXNDC2Q86VQ3 553 aa21.96■■□□□ 1.11
SNHG12-209ENST00000481368 SLC52A1Q9NWF4 448 aa21.95■■□□□ 1.1
SNHG12-209ENST00000481368 STAG3Q9UJ98 1225 aa21.93■■□□□ 1.1
SNHG12-209ENST00000481368 CPS1P31327 1500 aa21.93■■□□□ 1.1
SNHG12-209ENST00000481368 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
SNHG12-209ENST00000481368 HFM1A2PYH4 1435 aa21.9■■□□□ 1.1
SNHG12-209ENST00000481368 EID1Q9Y6B2 187 aa21.89■■□□□ 1.09
SNHG12-209ENST00000481368 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
SNHG12-209ENST00000481368 SPHKAPQ2M3C7 1700 aa21.86■■□□□ 1.09
SNHG12-209ENST00000481368 LRRC7Q96NW7 1537 aa21.85■■□□□ 1.09
SNHG12-209ENST00000481368 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
SNHG12-209ENST00000481368 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.09
SNHG12-209ENST00000481368 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
SNHG12-209ENST00000481368 XIRP1Q702N8 1843 aaKnown RBP21.82■■□□□ 1.08
SNHG12-209ENST00000481368 SLC26A8Q96RN1 970 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms