RNA–Protein interactions for RNA: ENST00000481368.5

SNHG12-209, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-209ENST00000481368 NISCHQ9Y2I1 1504 aa35.76■■■■□ 3.31
SNHG12-209ENST00000481368 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.69
SNHG12-209ENST00000481368 ABCC9O60706 1549 aa31.51■■■□□ 2.64
SNHG12-209ENST00000481368 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
SNHG12-209ENST00000481368 NACADO15069 1562 aa30.03■■■□□ 2.4
SNHG12-209ENST00000481368 DCAF8L2P0C7V8 631 aa29.94■■■□□ 2.38
SNHG12-209ENST00000481368 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
SNHG12-209ENST00000481368 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
SNHG12-209ENST00000481368 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
SNHG12-209ENST00000481368 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
SNHG12-209ENST00000481368 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.3
SNHG12-209ENST00000481368 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
SNHG12-209ENST00000481368 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
SNHG12-209ENST00000481368 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
SNHG12-209ENST00000481368 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
SNHG12-209ENST00000481368 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
SNHG12-209ENST00000481368 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
SNHG12-209ENST00000481368 CECR2Q9BXF3 1484 aa28.32■■■□□ 2.12
SNHG12-209ENST00000481368 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
SNHG12-209ENST00000481368 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
SNHG12-209ENST00000481368 ATAD2BQ9ULI0 1458 aa27.73■■■□□ 2.03
SNHG12-209ENST00000481368 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
SNHG12-209ENST00000481368 SMARCA2P51531 1590 aa27.62■■■□□ 2.01
SNHG12-209ENST00000481368 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
SNHG12-209ENST00000481368 HMGXB3Q12766 1538 aa27.57■■■□□ 2
SNHG12-209ENST00000481368 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
SNHG12-209ENST00000481368 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
SNHG12-209ENST00000481368 WIZO95785 1651 aa27.3■■□□□ 1.96
SNHG12-209ENST00000481368 NESP48681 1621 aa27.24■■□□□ 1.95
SNHG12-209ENST00000481368 RSF1Q96T23 1441 aaPredicted RBP27.15■■□□□ 1.94
SNHG12-209ENST00000481368 ERCC6Q03468 1493 aa27.11■■□□□ 1.93
SNHG12-209ENST00000481368 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
SNHG12-209ENST00000481368 CUX2O14529 1486 aa26.93■■□□□ 1.9
SNHG12-209ENST00000481368 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
SNHG12-209ENST00000481368 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
SNHG12-209ENST00000481368 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
SNHG12-209ENST00000481368 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
SNHG12-209ENST00000481368 PDS5BQ9NTI5 1447 aa26.81■■□□□ 1.88
SNHG12-209ENST00000481368 CFTRP13569 1480 aa26.71■■□□□ 1.87
SNHG12-209ENST00000481368 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.86
SNHG12-209ENST00000481368 FANCD2Q9BXW9 1451 aa26.6■■□□□ 1.85
SNHG12-209ENST00000481368 MRC2Q9UBG0 1479 aa26.6■■□□□ 1.85
SNHG12-209ENST00000481368 CEP164Q9UPV0 1460 aa26.57■■□□□ 1.84
SNHG12-209ENST00000481368 WDR62O43379 1518 aa26.56■■□□□ 1.84
SNHG12-209ENST00000481368 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
SNHG12-209ENST00000481368 DNAJC5Q9H3Z4 198 aa26.47■■□□□ 1.83
SNHG12-209ENST00000481368 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
SNHG12-209ENST00000481368 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
SNHG12-209ENST00000481368 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
SNHG12-209ENST00000481368 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
SNHG12-209ENST00000481368 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
SNHG12-209ENST00000481368 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
SNHG12-209ENST00000481368 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
SNHG12-209ENST00000481368 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
SNHG12-209ENST00000481368 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
SNHG12-209ENST00000481368 CUX1P39880 1505 aa25.89■■□□□ 1.74
SNHG12-209ENST00000481368 EIF4G3O43432 1585 aaKnown RBP25.88■■□□□ 1.73
SNHG12-209ENST00000481368 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
SNHG12-209ENST00000481368 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.73
SNHG12-209ENST00000481368 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.723e-10■■■■■ 36.3
SNHG12-209ENST00000481368 SOGA1O94964 1423 aa25.78■■□□□ 1.72
SNHG12-209ENST00000481368 OSCARQ8IYS5 282 aa25.75■■□□□ 1.71
SNHG12-209ENST00000481368 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
SNHG12-209ENST00000481368 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
SNHG12-209ENST00000481368 CHD1O14646 1710 aa25.63■■□□□ 1.69
SNHG12-209ENST00000481368 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
SNHG12-209ENST00000481368 BIVM-ERCC5R4GMW8 1640 aa25.57■■□□□ 1.68
SNHG12-209ENST00000481368 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
SNHG12-209ENST00000481368 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
SNHG12-209ENST00000481368 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
SNHG12-209ENST00000481368 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
SNHG12-209ENST00000481368 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
SNHG12-209ENST00000481368 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
SNHG12-209ENST00000481368 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
SNHG12-209ENST00000481368 GAPVD1Q14C86 1478 aa25.49■■□□□ 1.67
SNHG12-209ENST00000481368 FBLN2P98095 1184 aa25.48■■□□□ 1.67
SNHG12-209ENST00000481368 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
SNHG12-209ENST00000481368 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
SNHG12-209ENST00000481368 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
SNHG12-209ENST00000481368 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
SNHG12-209ENST00000481368 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
SNHG12-209ENST00000481368 ARHGEF11O15085 1522 aa25.41■■□□□ 1.66
SNHG12-209ENST00000481368 SYNJ2O15056 1496 aa25.38■■□□□ 1.65
SNHG12-209ENST00000481368 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
SNHG12-209ENST00000481368 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
SNHG12-209ENST00000481368 ADAMTS12P58397 1594 aa25.26■■□□□ 1.63
SNHG12-209ENST00000481368 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
SNHG12-209ENST00000481368 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
SNHG12-209ENST00000481368 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
SNHG12-209ENST00000481368 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
SNHG12-209ENST00000481368 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
SNHG12-209ENST00000481368 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
SNHG12-209ENST00000481368 NUP160Q12769 1436 aa25.12■■□□□ 1.61
SNHG12-209ENST00000481368 ERCC6L2Q5T890 1561 aa25.02■■□□□ 1.6
SNHG12-209ENST00000481368 IGF1RP08069 1367 aa25.02■■□□□ 1.6
SNHG12-209ENST00000481368 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
SNHG12-209ENST00000481368 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
SNHG12-209ENST00000481368 CUL7Q14999 1698 aa24.92■■□□□ 1.58
SNHG12-209ENST00000481368 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
SNHG12-209ENST00000481368 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms