RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 PLA2R1Q13018 1463 aa21.19■□□□□ 0.98
PTPN7-212ENST00000480836 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
PTPN7-212ENST00000480836 PKD2Q13563 968 aa21.18■□□□□ 0.98
PTPN7-212ENST00000480836 A2ML1A8K2U0 1454 aa21.18■□□□□ 0.98
PTPN7-212ENST00000480836 WASHC2CQ9Y4E1 1318 aa21.17■□□□□ 0.98
PTPN7-212ENST00000480836 ILDR2Q71H61 639 aa21.16■□□□□ 0.98
PTPN7-212ENST00000480836 TNRQ92752 1358 aa21.15■□□□□ 0.98
PTPN7-212ENST00000480836 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
PTPN7-212ENST00000480836 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
PTPN7-212ENST00000480836 PZPP20742 1482 aa21.14■□□□□ 0.98
PTPN7-212ENST00000480836 KDM5DQ9BY66 1539 aa21.13■□□□□ 0.97
PTPN7-212ENST00000480836 MIA2Q96PC5 1412 aa21.11■□□□□ 0.97
PTPN7-212ENST00000480836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPN7-212ENST00000480836 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
PTPN7-212ENST00000480836 MAP3K1Q13233 1512 aa21.1■□□□□ 0.97
PTPN7-212ENST00000480836 IQSEC2Q5JU85 1478 aa21.1■□□□□ 0.97
PTPN7-212ENST00000480836 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
PTPN7-212ENST00000480836 MAST1Q9Y2H9 1570 aa21.08■□□□□ 0.97
PTPN7-212ENST00000480836 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.96
PTPN7-212ENST00000480836 MROH1Q8NDA8 1641 aa21.07■□□□□ 0.96
PTPN7-212ENST00000480836 UBAP1LF5GYI3 381 aa21.06■□□□□ 0.96
PTPN7-212ENST00000480836 ABCC3O15438 1527 aa21.05■□□□□ 0.96
PTPN7-212ENST00000480836 RNF17Q9BXT8 1623 aaKnown RBP21.04■□□□□ 0.96
PTPN7-212ENST00000480836 FAM135AQ9P2D6 1515 aa21.03■□□□□ 0.96
PTPN7-212ENST00000480836 ABCC5O15440 1437 aa21.03■□□□□ 0.96
PTPN7-212ENST00000480836 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
PTPN7-212ENST00000480836 THEMISQ8N1K5 641 aaPredicted RBP21.01■□□□□ 0.95
PTPN7-212ENST00000480836 UGGT1Q9NYU2 1555 aa21.01■□□□□ 0.95
PTPN7-212ENST00000480836 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
PTPN7-212ENST00000480836 POLR1AO95602 1720 aaPredicted RBP21■□□□□ 0.95
PTPN7-212ENST00000480836 NLRP1Q9C000 1473 aa21■□□□□ 0.95
PTPN7-212ENST00000480836 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
PTPN7-212ENST00000480836 CFAP65Q6ZU64 1925 aaKnown RBP20.98■□□□□ 0.95
PTPN7-212ENST00000480836 VWDEQ8N2E2 1590 aa20.98■□□□□ 0.95
PTPN7-212ENST00000480836 ERVK-7P63135 1459 aa20.98■□□□□ 0.95
PTPN7-212ENST00000480836 SHANK2Q9UPX8 1470 aa20.98■□□□□ 0.95
PTPN7-212ENST00000480836 CEP152O94986 1710 aa20.98■□□□□ 0.95
PTPN7-212ENST00000480836 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
PTPN7-212ENST00000480836 MED14O60244 1454 aa20.96■□□□□ 0.95
PTPN7-212ENST00000480836 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.95
PTPN7-212ENST00000480836 DUOX2Q9NRD8 1548 aa20.95■□□□□ 0.94
PTPN7-212ENST00000480836 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
PTPN7-212ENST00000480836 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
PTPN7-212ENST00000480836 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
PTPN7-212ENST00000480836 LTKP29376 864 aa20.93■□□□□ 0.94
PTPN7-212ENST00000480836 DAPK1P53355 1430 aa20.93■□□□□ 0.94
PTPN7-212ENST00000480836 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
PTPN7-212ENST00000480836 STRCP1A6NGW2 1772 aa20.92■□□□□ 0.94
PTPN7-212ENST00000480836 HSPA1LP34931 641 aa20.92■□□□□ 0.94
PTPN7-212ENST00000480836 PIP4K2BP78356 416 aa20.92■□□□□ 0.94
PTPN7-212ENST00000480836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.94
PTPN7-212ENST00000480836 DEPDC5O75140 1603 aa20.92■□□□□ 0.94
PTPN7-212ENST00000480836 ZC3H13Q5T200 1668 aaKnown RBP20.92■□□□□ 0.94
PTPN7-212ENST00000480836 FGD6Q6ZV73 1430 aa20.91■□□□□ 0.94
PTPN7-212ENST00000480836 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
PTPN7-212ENST00000480836 CPS1P31327 1500 aa20.89■□□□□ 0.94
PTPN7-212ENST00000480836 UBR1Q8IWV7 1749 aa20.89■□□□□ 0.93
PTPN7-212ENST00000480836 PRDM15P57071 1507 aaPredicted RBP20.88■□□□□ 0.93
PTPN7-212ENST00000480836 IQGAP1P46940 1657 aa20.87■□□□□ 0.93
PTPN7-212ENST00000480836 APLP2Q06481 763 aa20.87■□□□□ 0.93
PTPN7-212ENST00000480836 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
PTPN7-212ENST00000480836 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
PTPN7-212ENST00000480836 SOCS7O14512 581 aa20.86■□□□□ 0.93
PTPN7-212ENST00000480836 ERBINQ96RT1 1412 aa20.86■□□□□ 0.93
PTPN7-212ENST00000480836 ARHGAP23Q9P227 1491 aa20.84■□□□□ 0.93
PTPN7-212ENST00000480836 TXNDC2Q86VQ3 553 aa20.84■□□□□ 0.93
PTPN7-212ENST00000480836 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
PTPN7-212ENST00000480836 TOM1O60784 492 aa20.83■□□□□ 0.93
PTPN7-212ENST00000480836 IDI1Q13907 227 aa20.83■□□□□ 0.93
PTPN7-212ENST00000480836 SLIT1O75093 1534 aa20.8■□□□□ 0.92
PTPN7-212ENST00000480836 PIK3C2BO00750 1634 aa20.8■□□□□ 0.92
PTPN7-212ENST00000480836 SCAF11Q99590 1463 aaKnown RBP20.8■□□□□ 0.92
PTPN7-212ENST00000480836 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
PTPN7-212ENST00000480836 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
PTPN7-212ENST00000480836 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
PTPN7-212ENST00000480836 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
PTPN7-212ENST00000480836 LMTK2Q8IWU2 1503 aa20.76■□□□□ 0.91
PTPN7-212ENST00000480836 SYNMO15061 1565 aa20.76■□□□□ 0.91
PTPN7-212ENST00000480836 NOS1P29475 1434 aa20.74■□□□□ 0.91
PTPN7-212ENST00000480836 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
PTPN7-212ENST00000480836 XIRP1Q702N8 1843 aaKnown RBP20.73■□□□□ 0.91
PTPN7-212ENST00000480836 KANK1Q14678 1352 aa20.72■□□□□ 0.91
PTPN7-212ENST00000480836 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
PTPN7-212ENST00000480836 SLC26A8Q96RN1 970 aa20.71■□□□□ 0.91
PTPN7-212ENST00000480836 EID1Q9Y6B2 187 aa20.7■□□□□ 0.9
PTPN7-212ENST00000480836 MED1Q15648 1581 aaPredicted RBP20.7■□□□□ 0.9
PTPN7-212ENST00000480836 STAG3Q9UJ98 1225 aa20.69■□□□□ 0.9
PTPN7-212ENST00000480836 TET3O43151 1660 aa20.69■□□□□ 0.9
PTPN7-212ENST00000480836 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
PTPN7-212ENST00000480836 ANKRD50Q9ULJ7 1429 aa20.68■□□□□ 0.9
PTPN7-212ENST00000480836 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
PTPN7-212ENST00000480836 KCNA6P17658 529 aa20.63■□□□□ 0.89
PTPN7-212ENST00000480836 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
PTPN7-212ENST00000480836 TMEM94Q12767 1356 aa20.62■□□□□ 0.89
PTPN7-212ENST00000480836 SLC52A1Q9NWF4 448 aa20.62■□□□□ 0.89
PTPN7-212ENST00000480836 ADGRB3O60242 1522 aa20.61■□□□□ 0.89
PTPN7-212ENST00000480836 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
PTPN7-212ENST00000480836 RGS17Q9UGC6 210 aaPredicted RBP20.59■□□□□ 0.89
PTPN7-212ENST00000480836 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
PTPN7-212ENST00000480836 PROSER2Q86WR7 435 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms