RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 KIF15Q9NS87 1388 aa20.08■□□□□ 0.8
COL1A2-207ENST00000478215 ZC3H13Q5T200 1668 aaKnown RBP20.07■□□□□ 0.8
COL1A2-207ENST00000478215 ADGRL2O95490 1459 aa20.07■□□□□ 0.8
COL1A2-207ENST00000478215 DEPDC5O75140 1603 aa20.07■□□□□ 0.8
COL1A2-207ENST00000478215 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
COL1A2-207ENST00000478215 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
COL1A2-207ENST00000478215 KDM5DQ9BY66 1539 aa20.06■□□□□ 0.8
COL1A2-207ENST00000478215 PTPRKQ15262 1439 aa20.05■□□□□ 0.8
COL1A2-207ENST00000478215 FAM135AQ9P2D6 1515 aa20.05■□□□□ 0.8
COL1A2-207ENST00000478215 NCOA1Q15788 1441 aa20.04■□□□□ 0.8
COL1A2-207ENST00000478215 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
COL1A2-207ENST00000478215 ZMYM3Q14202 1370 aa20.03■□□□□ 0.8
COL1A2-207ENST00000478215 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.8
COL1A2-207ENST00000478215 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.8
COL1A2-207ENST00000478215 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.79
COL1A2-207ENST00000478215 ERBINQ96RT1 1412 aa20.02■□□□□ 0.79
COL1A2-207ENST00000478215 MYO3AQ8NEV4 1616 aa20.01■□□□□ 0.79
COL1A2-207ENST00000478215 ABCC3O15438 1527 aa20.01■□□□□ 0.79
COL1A2-207ENST00000478215 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
COL1A2-207ENST00000478215 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
COL1A2-207ENST00000478215 ZNF142P52746 1687 aaPredicted RBP20■□□□□ 0.79
COL1A2-207ENST00000478215 STRCQ7RTU9 1775 aa19.98■□□□□ 0.79
COL1A2-207ENST00000478215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
COL1A2-207ENST00000478215 NPATQ14207 1427 aa19.97■□□□□ 0.79
COL1A2-207ENST00000478215 UHRF1BP1Q6BDS2 1440 aa19.95■□□□□ 0.78
COL1A2-207ENST00000478215 PZPP20742 1482 aa19.94■□□□□ 0.78
COL1A2-207ENST00000478215 HSPA2P54652 639 aa19.94■□□□□ 0.78
COL1A2-207ENST00000478215 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
COL1A2-207ENST00000478215 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
COL1A2-207ENST00000478215 ITGAEP38570 1179 aa19.93■□□□□ 0.78
COL1A2-207ENST00000478215 GCC2Q8IWJ2 1684 aa19.92■□□□□ 0.78
COL1A2-207ENST00000478215 UNC13BO14795 1591 aa19.91■□□□□ 0.78
COL1A2-207ENST00000478215 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
COL1A2-207ENST00000478215 ROCK1Q13464 1354 aa19.91■□□□□ 0.78
COL1A2-207ENST00000478215 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
COL1A2-207ENST00000478215 FBXO31Q5XUX0 539 aaPredicted RBP19.88■□□□□ 0.77
COL1A2-207ENST00000478215 SPATA31D1Q6ZQQ2 1576 aa19.87■□□□□ 0.77
COL1A2-207ENST00000478215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL1A2-207ENST00000478215 TET3O43151 1660 aa19.87■□□□□ 0.77
COL1A2-207ENST00000478215 LMTK2Q8IWU2 1503 aa19.86■□□□□ 0.77
COL1A2-207ENST00000478215 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
COL1A2-207ENST00000478215 TNRQ92752 1358 aa19.84■□□□□ 0.77
COL1A2-207ENST00000478215 IQGAP3Q86VI3 1631 aa19.84■□□□□ 0.77
COL1A2-207ENST00000478215 EFCAB6Q5THR3 1501 aa19.84■□□□□ 0.77
COL1A2-207ENST00000478215 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
COL1A2-207ENST00000478215 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.76
COL1A2-207ENST00000478215 KANK1Q14678 1352 aa19.83■□□□□ 0.76
COL1A2-207ENST00000478215 E9PCH4 1651 aa19.82■□□□□ 0.76
COL1A2-207ENST00000478215 A2ML1A8K2U0 1454 aa19.82■□□□□ 0.76
COL1A2-207ENST00000478215 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
COL1A2-207ENST00000478215 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
COL1A2-207ENST00000478215 SYNMO15061 1565 aa19.78■□□□□ 0.76
COL1A2-207ENST00000478215 NAIPQ13075 1403 aa19.77■□□□□ 0.76
COL1A2-207ENST00000478215 PIK3C2BO00750 1634 aa19.77■□□□□ 0.76
COL1A2-207ENST00000478215 NLRP1Q9C000 1473 aa19.77■□□□□ 0.76
COL1A2-207ENST00000478215 UGGT1Q9NYU2 1555 aa19.74■□□□□ 0.75
COL1A2-207ENST00000478215 PLA2R1Q13018 1463 aa19.73■□□□□ 0.75
COL1A2-207ENST00000478215 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
COL1A2-207ENST00000478215 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
COL1A2-207ENST00000478215 SPHKAPQ2M3C7 1700 aa19.72■□□□□ 0.75
COL1A2-207ENST00000478215 NEURL4Q96JN8 1562 aa19.7■□□□□ 0.74
COL1A2-207ENST00000478215 RPRD2Q5VT52 1461 aaKnown RBP19.7■□□□□ 0.74
COL1A2-207ENST00000478215 NOS1P29475 1434 aa19.69■□□□□ 0.74
COL1A2-207ENST00000478215 NUP155O75694 1391 aa19.69■□□□□ 0.74
COL1A2-207ENST00000478215 NCKAP5LQ9HCH0 1330 aa19.67■□□□□ 0.74
COL1A2-207ENST00000478215 PTPRTO14522 1441 aa19.66■□□□□ 0.74
COL1A2-207ENST00000478215 IQGAP1P46940 1657 aa19.65■□□□□ 0.74
COL1A2-207ENST00000478215 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
COL1A2-207ENST00000478215 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
COL1A2-207ENST00000478215 TMEM131LA2VDJ0 1609 aa19.62■□□□□ 0.73
COL1A2-207ENST00000478215 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
COL1A2-207ENST00000478215 SLIT1O75093 1534 aa19.61■□□□□ 0.73
COL1A2-207ENST00000478215 KIF1BO60333 1816 aa19.6■□□□□ 0.73
COL1A2-207ENST00000478215 PKD2Q13563 968 aa19.6■□□□□ 0.73
COL1A2-207ENST00000478215 IDI1Q13907 227 aa19.6■□□□□ 0.73
COL1A2-207ENST00000478215 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
COL1A2-207ENST00000478215 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
COL1A2-207ENST00000478215 MED14O60244 1454 aa19.57■□□□□ 0.72
COL1A2-207ENST00000478215 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
COL1A2-207ENST00000478215 LTBP4Q8N2S1 1624 aa19.57■□□□□ 0.72
COL1A2-207ENST00000478215 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
COL1A2-207ENST00000478215 ANKLE2Q86XL3 938 aa19.54■□□□□ 0.72
COL1A2-207ENST00000478215 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
COL1A2-207ENST00000478215 SLC52A1Q9NWF4 448 aa19.54■□□□□ 0.72
COL1A2-207ENST00000478215 NPHP4O75161 1426 aaPredicted RBP19.53■□□□□ 0.72
COL1A2-207ENST00000478215 TRPM2O94759 1503 aa19.53■□□□□ 0.72
COL1A2-207ENST00000478215 SETD5Q9C0A6 1442 aa19.52■□□□□ 0.72
COL1A2-207ENST00000478215 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
COL1A2-207ENST00000478215 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.72
COL1A2-207ENST00000478215 LTKP29376 864 aa19.51■□□□□ 0.71
COL1A2-207ENST00000478215 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
COL1A2-207ENST00000478215 RAB3GAP2Q9H2M9 1393 aa19.47■□□□□ 0.71
COL1A2-207ENST00000478215 TXNDC2Q86VQ3 553 aa19.47■□□□□ 0.71
COL1A2-207ENST00000478215 ZFYVE9O95405 1425 aa19.47■□□□□ 0.71
COL1A2-207ENST00000478215 XIRP1Q702N8 1843 aaKnown RBP19.46■□□□□ 0.71
COL1A2-207ENST00000478215 CERKQ8TCT0 537 aa19.46■□□□□ 0.71
COL1A2-207ENST00000478215 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
COL1A2-207ENST00000478215 RIMS2Q9UQ26 1411 aa19.44■□□□□ 0.7
COL1A2-207ENST00000478215 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
COL1A2-207ENST00000478215 PPLO60437 1756 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms