RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
SSR1-205ENST00000475213 ILDR1Q86SU0 546 aaPredicted RBP19.18■□□□□ 0.66
SSR1-205ENST00000475213 NPATQ14207 1427 aa19.17■□□□□ 0.66
SSR1-205ENST00000475213 KIF3BO15066 747 aa19.17■□□□□ 0.66
SSR1-205ENST00000475213 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
SSR1-205ENST00000475213 STRCQ7RTU9 1775 aa19.16■□□□□ 0.66
SSR1-205ENST00000475213 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
SSR1-205ENST00000475213 PTPRKQ15262 1439 aa19.13■□□□□ 0.65
SSR1-205ENST00000475213 CROCC2H7BZ55 1655 aa19.11■□□□□ 0.65
SSR1-205ENST00000475213 FGD6Q6ZV73 1430 aa19.11■□□□□ 0.65
SSR1-205ENST00000475213 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
SSR1-205ENST00000475213 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
SSR1-205ENST00000475213 TCOF1Q13428 1488 aaKnown RBP19.09■□□□□ 0.65
SSR1-205ENST00000475213 ABCC5O15440 1437 aa19.09■□□□□ 0.65
SSR1-205ENST00000475213 MYO3AQ8NEV4 1616 aa19.09■□□□□ 0.65
SSR1-205ENST00000475213 RNF17Q9BXT8 1623 aaKnown RBP19.08■□□□□ 0.65
SSR1-205ENST00000475213 EIF2AK4Q9P2K8 1649 aaKnown RBP19.08■□□□□ 0.65
SSR1-205ENST00000475213 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
SSR1-205ENST00000475213 SHANK2Q9UPX8 1470 aa19.08■□□□□ 0.64
SSR1-205ENST00000475213 ZNF142P52746 1687 aaPredicted RBP19.08■□□□□ 0.64
SSR1-205ENST00000475213 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
SSR1-205ENST00000475213 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
SSR1-205ENST00000475213 DAPK1P53355 1430 aa19.07■□□□□ 0.64
SSR1-205ENST00000475213 DUOX2Q9NRD8 1548 aa19.05■□□□□ 0.64
SSR1-205ENST00000475213 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
SSR1-205ENST00000475213 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
SSR1-205ENST00000475213 PZPP20742 1482 aa19.04■□□□□ 0.64
SSR1-205ENST00000475213 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
SSR1-205ENST00000475213 KIF15Q9NS87 1388 aa19.03■□□□□ 0.64
SSR1-205ENST00000475213 PTPRTO14522 1441 aa19.02■□□□□ 0.64
SSR1-205ENST00000475213 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
SSR1-205ENST00000475213 FBXO41Q8TF61 875 aa19.02■□□□□ 0.64
SSR1-205ENST00000475213 MROH1Q8NDA8 1641 aa19.02■□□□□ 0.64
SSR1-205ENST00000475213 ZC3H13Q5T200 1668 aaKnown RBP19.01■□□□□ 0.63
SSR1-205ENST00000475213 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
SSR1-205ENST00000475213 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
SSR1-205ENST00000475213 ABCC3O15438 1527 aa19■□□□□ 0.63
SSR1-205ENST00000475213 TNRQ92752 1358 aa19■□□□□ 0.63
SSR1-205ENST00000475213 A2ML1A8K2U0 1454 aa18.99■□□□□ 0.63
SSR1-205ENST00000475213 CEP152O94986 1710 aa18.99■□□□□ 0.63
SSR1-205ENST00000475213 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
SSR1-205ENST00000475213 CHIC2Q9UKJ5 165 aa18.98■□□□□ 0.63
SSR1-205ENST00000475213 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
SSR1-205ENST00000475213 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
SSR1-205ENST00000475213 CERKQ8TCT0 537 aa18.97■□□□□ 0.63
SSR1-205ENST00000475213 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
SSR1-205ENST00000475213 NCKAP5LQ9HCH0 1330 aa18.97■□□□□ 0.63
SSR1-205ENST00000475213 ANKRD30AQ9BXX3 1397 aa18.96■□□□□ 0.63
SSR1-205ENST00000475213 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
SSR1-205ENST00000475213 DEPDC5O75140 1603 aa18.93■□□□□ 0.62
SSR1-205ENST00000475213 ADGRL2O95490 1459 aa18.93■□□□□ 0.62
SSR1-205ENST00000475213 PKD2Q13563 968 aa18.93■□□□□ 0.62
SSR1-205ENST00000475213 SPATA31D1Q6ZQQ2 1576 aa18.92■□□□□ 0.62
SSR1-205ENST00000475213 NLRP1Q9C000 1473 aa18.91■□□□□ 0.62
SSR1-205ENST00000475213 ERVK-7P63135 1459 aa18.9■□□□□ 0.62
SSR1-205ENST00000475213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSR1-205ENST00000475213 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
SSR1-205ENST00000475213 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.61
SSR1-205ENST00000475213 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
SSR1-205ENST00000475213 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
SSR1-205ENST00000475213 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
SSR1-205ENST00000475213 KANK1Q14678 1352 aa18.87■□□□□ 0.61
SSR1-205ENST00000475213 ARHGAP31Q2M1Z3 1444 aa18.87■□□□□ 0.61
SSR1-205ENST00000475213 THEMISQ8N1K5 641 aaPredicted RBP18.86■□□□□ 0.61
SSR1-205ENST00000475213 VWDEQ8N2E2 1590 aa18.85■□□□□ 0.61
SSR1-205ENST00000475213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.85■□□□□ 0.61
SSR1-205ENST00000475213 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
SSR1-205ENST00000475213 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
SSR1-205ENST00000475213 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.61
SSR1-205ENST00000475213 ZNF335Q9H4Z2 1342 aaPredicted RBP18.82■□□□□ 0.6
SSR1-205ENST00000475213 ANKLE2Q86XL3 938 aa18.82■□□□□ 0.6
SSR1-205ENST00000475213 UBR1Q8IWV7 1749 aa18.81■□□□□ 0.6
SSR1-205ENST00000475213 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
SSR1-205ENST00000475213 EFCAB6Q5THR3 1501 aa18.78■□□□□ 0.6
SSR1-205ENST00000475213 MED14O60244 1454 aa18.77■□□□□ 0.6
SSR1-205ENST00000475213 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.6
SSR1-205ENST00000475213 KCNA4P22459 653 aa18.77■□□□□ 0.6
SSR1-205ENST00000475213 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
SSR1-205ENST00000475213 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
SSR1-205ENST00000475213 ITGAEP38570 1179 aa18.75■□□□□ 0.59
SSR1-205ENST00000475213 IQGAP1P46940 1657 aa18.75■□□□□ 0.59
SSR1-205ENST00000475213 UNC13BO14795 1591 aa18.74■□□□□ 0.59
SSR1-205ENST00000475213 SYNMO15061 1565 aa18.74■□□□□ 0.59
SSR1-205ENST00000475213 NOS1P29475 1434 aa18.73■□□□□ 0.59
SSR1-205ENST00000475213 TET3O43151 1660 aa18.73■□□□□ 0.59
SSR1-205ENST00000475213 SLIT1O75093 1534 aa18.72■□□□□ 0.59
SSR1-205ENST00000475213 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
SSR1-205ENST00000475213 KDM5AP29375 1690 aaKnown RBP18.71■□□□□ 0.59
SSR1-205ENST00000475213 GCC2Q8IWJ2 1684 aa18.71■□□□□ 0.59
SSR1-205ENST00000475213 RRBP1Q9P2E9 1410 aaKnown RBP18.71■□□□□ 0.59
SSR1-205ENST00000475213 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
SSR1-205ENST00000475213 IDI1Q13907 227 aa18.7■□□□□ 0.58
SSR1-205ENST00000475213 SCAF11Q99590 1463 aaKnown RBP18.7■□□□□ 0.58
SSR1-205ENST00000475213 LTKP29376 864 aa18.69■□□□□ 0.58
SSR1-205ENST00000475213 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
SSR1-205ENST00000475213 CPS1P31327 1500 aa18.68■□□□□ 0.58
SSR1-205ENST00000475213 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
SSR1-205ENST00000475213 TXNDC2Q86VQ3 553 aa18.67■□□□□ 0.58
SSR1-205ENST00000475213 TMEM2Q9UHN6 1383 aa18.67■□□□□ 0.58
SSR1-205ENST00000475213 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms