RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 NPATQ14207 1427 aa21.66■■□□□ 1.06
ARPC1A-204ENST00000471960 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
ARPC1A-204ENST00000471960 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
ARPC1A-204ENST00000471960 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.05
ARPC1A-204ENST00000471960 MROH1Q8NDA8 1641 aa21.63■■□□□ 1.05
ARPC1A-204ENST00000471960 RNF17Q9BXT8 1623 aaKnown RBP21.63■■□□□ 1.05
ARPC1A-204ENST00000471960 KDM5DQ9BY66 1539 aa21.63■■□□□ 1.05
ARPC1A-204ENST00000471960 FBXO31Q5XUX0 539 aaPredicted RBP21.62■■□□□ 1.05
ARPC1A-204ENST00000471960 RRP7BPQ9NSQ0 103 aa21.62■■□□□ 1.05
ARPC1A-204ENST00000471960 CHIC2Q9UKJ5 165 aa21.62■■□□□ 1.05
ARPC1A-204ENST00000471960 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
ARPC1A-204ENST00000471960 KIF15Q9NS87 1388 aa21.61■■□□□ 1.05
ARPC1A-204ENST00000471960 DUOX2Q9NRD8 1548 aa21.6■■□□□ 1.05
ARPC1A-204ENST00000471960 WASHC2CQ9Y4E1 1318 aa21.59■■□□□ 1.05
ARPC1A-204ENST00000471960 EIF2AK4Q9P2K8 1649 aaKnown RBP21.59■■□□□ 1.05
ARPC1A-204ENST00000471960 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.05
ARPC1A-204ENST00000471960 FBXO41Q8TF61 875 aa21.58■■□□□ 1.05
ARPC1A-204ENST00000471960 ABCC3O15438 1527 aa21.57■■□□□ 1.04
ARPC1A-204ENST00000471960 ZNF142P52746 1687 aaPredicted RBP21.56■■□□□ 1.04
ARPC1A-204ENST00000471960 CEP152O94986 1710 aa21.56■■□□□ 1.04
ARPC1A-204ENST00000471960 PZPP20742 1482 aa21.56■■□□□ 1.04
ARPC1A-204ENST00000471960 FAM135AQ9P2D6 1515 aa21.55■■□□□ 1.04
ARPC1A-204ENST00000471960 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
ARPC1A-204ENST00000471960 CEP170BQ9Y4F5 1589 aaPredicted RBP21.55■■□□□ 1.04
ARPC1A-204ENST00000471960 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
ARPC1A-204ENST00000471960 TNRQ92752 1358 aa21.51■■□□□ 1.03
ARPC1A-204ENST00000471960 ERBINQ96RT1 1412 aa21.51■■□□□ 1.03
ARPC1A-204ENST00000471960 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
ARPC1A-204ENST00000471960 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
ARPC1A-204ENST00000471960 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
ARPC1A-204ENST00000471960 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
ARPC1A-204ENST00000471960 A2ML1A8K2U0 1454 aa21.49■■□□□ 1.03
ARPC1A-204ENST00000471960 ADGRL2O95490 1459 aa21.49■■□□□ 1.03
ARPC1A-204ENST00000471960 PRDM15P57071 1507 aaPredicted RBP21.49■■□□□ 1.03
ARPC1A-204ENST00000471960 DEPDC5O75140 1603 aa21.47■■□□□ 1.03
ARPC1A-204ENST00000471960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.47■■□□□ 1.03
ARPC1A-204ENST00000471960 PTPRTO14522 1441 aa21.46■■□□□ 1.03
ARPC1A-204ENST00000471960 DMRT2Q9Y5R5 561 aa21.44■■□□□ 1.02
ARPC1A-204ENST00000471960 ERVK-7P63135 1459 aa21.44■■□□□ 1.02
ARPC1A-204ENST00000471960 SPATA31D1Q6ZQQ2 1576 aa21.44■■□□□ 1.02
ARPC1A-204ENST00000471960 PLA2R1Q13018 1463 aa21.42■■□□□ 1.02
ARPC1A-204ENST00000471960 VWDEQ8N2E2 1590 aa21.41■■□□□ 1.02
ARPC1A-204ENST00000471960 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
ARPC1A-204ENST00000471960 ITGAEP38570 1179 aa21.39■■□□□ 1.01
ARPC1A-204ENST00000471960 NLRP1Q9C000 1473 aa21.38■■□□□ 1.01
ARPC1A-204ENST00000471960 ANKRD50Q9ULJ7 1429 aa21.38■■□□□ 1.01
ARPC1A-204ENST00000471960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
ARPC1A-204ENST00000471960 ARHGAP31Q2M1Z3 1444 aa21.37■■□□□ 1.01
ARPC1A-204ENST00000471960 LTBP4Q8N2S1 1624 aa21.37■■□□□ 1.01
ARPC1A-204ENST00000471960 NEURL4Q96JN8 1562 aa21.36■■□□□ 1.01
ARPC1A-204ENST00000471960 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
ARPC1A-204ENST00000471960 PKD2Q13563 968 aa21.36■■□□□ 1.01
ARPC1A-204ENST00000471960 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
ARPC1A-204ENST00000471960 KANK1Q14678 1352 aa21.35■■□□□ 1.01
ARPC1A-204ENST00000471960 LMTK2Q8IWU2 1503 aa21.34■■□□□ 1.01
ARPC1A-204ENST00000471960 ZNF335Q9H4Z2 1342 aaPredicted RBP21.32■■□□□ 1
ARPC1A-204ENST00000471960 ROCK1Q13464 1354 aa21.32■■□□□ 1
ARPC1A-204ENST00000471960 UBR1Q8IWV7 1749 aa21.31■■□□□ 1
ARPC1A-204ENST00000471960 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
ARPC1A-204ENST00000471960 RRBP1Q9P2E9 1410 aaKnown RBP21.29■■□□□ 1
ARPC1A-204ENST00000471960 UNC13BO14795 1591 aa21.29■■□□□ 1
ARPC1A-204ENST00000471960 SYNMO15061 1565 aa21.29■■□□□ 1
ARPC1A-204ENST00000471960 THEMISQ8N1K5 641 aaPredicted RBP21.29■■□□□ 1
ARPC1A-204ENST00000471960 PIK3C2BO00750 1634 aa21.28■■□□□ 1
ARPC1A-204ENST00000471960 ANKLE2Q86XL3 938 aa21.26■□□□□ 0.99
ARPC1A-204ENST00000471960 NOS1P29475 1434 aa21.25■□□□□ 0.99
ARPC1A-204ENST00000471960 TET3O43151 1660 aa21.24■□□□□ 0.99
ARPC1A-204ENST00000471960 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
ARPC1A-204ENST00000471960 IDI1Q13907 227 aa21.23■□□□□ 0.99
ARPC1A-204ENST00000471960 MED14O60244 1454 aa21.22■□□□□ 0.99
ARPC1A-204ENST00000471960 LTKP29376 864 aa21.21■□□□□ 0.99
ARPC1A-204ENST00000471960 GCC2Q8IWJ2 1684 aa21.21■□□□□ 0.99
ARPC1A-204ENST00000471960 E9PCH4 1651 aa21.2■□□□□ 0.98
ARPC1A-204ENST00000471960 IQGAP1P46940 1657 aa21.2■□□□□ 0.98
ARPC1A-204ENST00000471960 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
ARPC1A-204ENST00000471960 IQGAP3Q86VI3 1631 aa21.19■□□□□ 0.98
ARPC1A-204ENST00000471960 SLIT1O75093 1534 aa21.19■□□□□ 0.98
ARPC1A-204ENST00000471960 IQSEC2Q5JU85 1478 aa21.18■□□□□ 0.98
ARPC1A-204ENST00000471960 FOXD1Q16676 465 aa21.17■□□□□ 0.98
ARPC1A-204ENST00000471960 NUP155O75694 1391 aa21.17■□□□□ 0.98
ARPC1A-204ENST00000471960 SCAF11Q99590 1463 aaKnown RBP21.17■□□□□ 0.98
ARPC1A-204ENST00000471960 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
ARPC1A-204ENST00000471960 MYO5BQ9ULV0 1848 aa21.15■□□□□ 0.98
ARPC1A-204ENST00000471960 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
ARPC1A-204ENST00000471960 TXNDC2Q86VQ3 553 aa21.15■□□□□ 0.98
ARPC1A-204ENST00000471960 NAIPQ13075 1403 aa21.14■□□□□ 0.98
ARPC1A-204ENST00000471960 TMEM2Q9UHN6 1383 aa21.14■□□□□ 0.98
ARPC1A-204ENST00000471960 ADGRB3O60242 1522 aa21.14■□□□□ 0.97
ARPC1A-204ENST00000471960 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
ARPC1A-204ENST00000471960 KDM5AP29375 1690 aaKnown RBP21.12■□□□□ 0.97
ARPC1A-204ENST00000471960 SLC52A1Q9NWF4 448 aa21.09■□□□□ 0.97
ARPC1A-204ENST00000471960 TMEM131LA2VDJ0 1609 aa21.08■□□□□ 0.97
ARPC1A-204ENST00000471960 CPS1P31327 1500 aa21.07■□□□□ 0.96
ARPC1A-204ENST00000471960 EID1Q9Y6B2 187 aa21.06■□□□□ 0.96
ARPC1A-204ENST00000471960 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
ARPC1A-204ENST00000471960 ZFYVE9O95405 1425 aa21.04■□□□□ 0.96
ARPC1A-204ENST00000471960 UBAP1LF5GYI3 381 aa21.04■□□□□ 0.96
ARPC1A-204ENST00000471960 CHGAP10645 457 aaKnown RBP21.02■□□□□ 0.96
ARPC1A-204ENST00000471960 LRRC7Q96NW7 1537 aa21.02■□□□□ 0.96
ARPC1A-204ENST00000471960 SPHKAPQ2M3C7 1700 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms