RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FAM135AQ9P2D6 1515 aa30.23■■■□□ 2.43
HDAC7-220ENST00000471235 ZC3H13Q5T200 1668 aaKnown RBP30.23■■■□□ 2.43
HDAC7-220ENST00000471235 CNTLNQ9NXG0 1405 aa30.22■■■□□ 2.43
HDAC7-220ENST00000471235 CEP152O94986 1710 aa30.22■■■□□ 2.43
HDAC7-220ENST00000471235 KIF3BO15066 747 aa30.22■■■□□ 2.43
HDAC7-220ENST00000471235 RRP7BPQ9NSQ0 103 aa30.22■■■□□ 2.43
HDAC7-220ENST00000471235 KDM5DQ9BY66 1539 aa30.21■■■□□ 2.43
HDAC7-220ENST00000471235 PRDM15P57071 1507 aaPredicted RBP30.19■■■□□ 2.42
HDAC7-220ENST00000471235 GGT6Q6P531 493 aa30.19■■■□□ 2.42
HDAC7-220ENST00000471235 ROCK1Q13464 1354 aa30.17■■■□□ 2.42
HDAC7-220ENST00000471235 GCC2Q8IWJ2 1684 aa30.16■■■□□ 2.42
HDAC7-220ENST00000471235 ITGAEP38570 1179 aa30.15■■■□□ 2.42
HDAC7-220ENST00000471235 ESF1Q9H501 851 aaKnown RBP30.13■■■□□ 2.41
HDAC7-220ENST00000471235 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
HDAC7-220ENST00000471235 ABCC3O15438 1527 aa30.12■■■□□ 2.41
HDAC7-220ENST00000471235 CAMSAP1Q5T5Y3 1602 aa30.11■■■□□ 2.41
HDAC7-220ENST00000471235 PLPPR3Q6T4P5 718 aa30.1■■■□□ 2.41
HDAC7-220ENST00000471235 PPP6R1Q9UPN7 881 aa30.1■■■□□ 2.41
HDAC7-220ENST00000471235 ANKRD50Q9ULJ7 1429 aa30.1■■■□□ 2.41
HDAC7-220ENST00000471235 UNC13BO14795 1591 aa30.09■■■□□ 2.41
HDAC7-220ENST00000471235 SETD1BQ9UPS6 1966 aaKnown RBP30.09■■■□□ 2.41
HDAC7-220ENST00000471235 CEBPAP49715 358 aaPredicted RBP30.07■■■□□ 2.4
HDAC7-220ENST00000471235 VWDEQ8N2E2 1590 aa30.07■■■□□ 2.4
HDAC7-220ENST00000471235 ZMYM3Q14202 1370 aa30.05■■■□□ 2.4
HDAC7-220ENST00000471235 CFAP65Q6ZU64 1925 aaKnown RBP30.01■■■□□ 2.39
HDAC7-220ENST00000471235 MYO3AQ8NEV4 1616 aa30■■■□□ 2.39
HDAC7-220ENST00000471235 PZPP20742 1482 aa30■■■□□ 2.39
HDAC7-220ENST00000471235 WASHC2CQ9Y4E1 1318 aa30■■■□□ 2.39
HDAC7-220ENST00000471235 LMTK3Q96Q04 1460 aa29.99■■■□□ 2.39
HDAC7-220ENST00000471235 NPATQ14207 1427 aa29.99■■■□□ 2.39
HDAC7-220ENST00000471235 LMTK2Q8IWU2 1503 aa29.97■■■□□ 2.39
HDAC7-220ENST00000471235 ZNF142P52746 1687 aaPredicted RBP29.96■■■□□ 2.39
HDAC7-220ENST00000471235 IQGAP3Q86VI3 1631 aa29.96■■■□□ 2.39
HDAC7-220ENST00000471235 NAIPQ13075 1403 aa29.96■■■□□ 2.39
HDAC7-220ENST00000471235 TET3O43151 1660 aa29.95■■■□□ 2.38
HDAC7-220ENST00000471235 HFM1A2PYH4 1435 aa29.94■■■□□ 2.38
HDAC7-220ENST00000471235 KANK1Q14678 1352 aa29.93■■■□□ 2.38
HDAC7-220ENST00000471235 EFCAB6Q5THR3 1501 aa29.93■■■□□ 2.38
HDAC7-220ENST00000471235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.92■■■□□ 2.38
HDAC7-220ENST00000471235 SPATA31D1Q6ZQQ2 1576 aa29.9■■■□□ 2.38
HDAC7-220ENST00000471235 UHRF1BP1Q6BDS2 1440 aa29.9■■■□□ 2.38
HDAC7-220ENST00000471235 ARHGAP31Q2M1Z3 1444 aa29.87■■■□□ 2.37
HDAC7-220ENST00000471235 ERVK-7P63135 1459 aa29.87■■■□□ 2.37
HDAC7-220ENST00000471235 CEP170BQ9Y4F5 1589 aaPredicted RBP29.86■■■□□ 2.37
HDAC7-220ENST00000471235 E9PCH4 1651 aa29.85■■■□□ 2.37
HDAC7-220ENST00000471235 FBXO31Q5XUX0 539 aaPredicted RBP29.82■■■□□ 2.36
HDAC7-220ENST00000471235 TNRQ92752 1358 aa29.81■■■□□ 2.36
HDAC7-220ENST00000471235 SYNMO15061 1565 aa29.77■■■□□ 2.36
HDAC7-220ENST00000471235 A2ML1A8K2U0 1454 aa29.75■■■□□ 2.35
HDAC7-220ENST00000471235 RPRD2Q5VT52 1461 aaKnown RBP29.75■■■□□ 2.35
HDAC7-220ENST00000471235 NUP155O75694 1391 aa29.75■■■□□ 2.35
HDAC7-220ENST00000471235 STRCQ7RTU9 1775 aa29.75■■■□□ 2.35
HDAC7-220ENST00000471235 NLRP1Q9C000 1473 aa29.74■■■□□ 2.35
HDAC7-220ENST00000471235 HSPA2P54652 639 aa29.73■■■□□ 2.35
HDAC7-220ENST00000471235 UBR1Q8IWV7 1749 aa29.71■■■□□ 2.35
HDAC7-220ENST00000471235 SPHKAPQ2M3C7 1700 aa29.71■■■□□ 2.35
HDAC7-220ENST00000471235 PIK3C2BO00750 1634 aa29.7■■■□□ 2.34
HDAC7-220ENST00000471235 NOS1P29475 1434 aa29.69■■■□□ 2.34
HDAC7-220ENST00000471235 POLR1AO95602 1720 aaPredicted RBP29.67■■■□□ 2.34
HDAC7-220ENST00000471235 UGGT1Q9NYU2 1555 aa29.65■■■□□ 2.34
HDAC7-220ENST00000471235 SETD5Q9C0A6 1442 aa29.65■■■□□ 2.34
HDAC7-220ENST00000471235 KDM5AP29375 1690 aaKnown RBP29.65■■■□□ 2.34
HDAC7-220ENST00000471235 MYO5BQ9ULV0 1848 aa29.64■■■□□ 2.34
HDAC7-220ENST00000471235 PLA2R1Q13018 1463 aa29.61■■■□□ 2.33
HDAC7-220ENST00000471235 ADGRB3O60242 1522 aa29.57■■■□□ 2.32
HDAC7-220ENST00000471235 RAB3GAP2Q9H2M9 1393 aa29.57■■■□□ 2.32
HDAC7-220ENST00000471235 TRIM52Q96A61 297 aa29.57■■■□□ 2.32
HDAC7-220ENST00000471235 TRPM2O94759 1503 aa29.52■■■□□ 2.32
HDAC7-220ENST00000471235 NEURL4Q96JN8 1562 aa29.52■■■□□ 2.32
HDAC7-220ENST00000471235 TMEM131LA2VDJ0 1609 aa29.51■■■□□ 2.31
HDAC7-220ENST00000471235 CLTCL1P53675 1640 aa29.5■■■□□ 2.31
HDAC7-220ENST00000471235 PTPRTO14522 1441 aa29.5■■■□□ 2.31
HDAC7-220ENST00000471235 SLIT1O75093 1534 aa29.47■■■□□ 2.31
HDAC7-220ENST00000471235 IDI1Q13907 227 aa29.47■■■□□ 2.31
HDAC7-220ENST00000471235 KIF1BO60333 1816 aa29.47■■■□□ 2.31
HDAC7-220ENST00000471235 ARHGAP23Q9P227 1491 aa29.45■■■□□ 2.31
HDAC7-220ENST00000471235 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.31
HDAC7-220ENST00000471235 THEMISQ8N1K5 641 aaPredicted RBP29.44■■■□□ 2.3
HDAC7-220ENST00000471235 SLC52A1Q9NWF4 448 aa29.44■■■□□ 2.3
HDAC7-220ENST00000471235 ACIN1Q9UKV3 1341 aaKnown RBP29.44■■■□□ 2.3
HDAC7-220ENST00000471235 PKD2Q13563 968 aa29.43■■■□□ 2.3
HDAC7-220ENST00000471235 IQGAP1P46940 1657 aa29.43■■■□□ 2.3
HDAC7-220ENST00000471235 NCKAP5LQ9HCH0 1330 aa29.42■■■□□ 2.3
HDAC7-220ENST00000471235 MPHOSPH9Q99550 1183 aa29.38■■■□□ 2.29
HDAC7-220ENST00000471235 SCAF11Q99590 1463 aaKnown RBP29.36■■■□□ 2.29
HDAC7-220ENST00000471235 STAG3Q9UJ98 1225 aa29.36■■■□□ 2.29
HDAC7-220ENST00000471235 TMEM2Q9UHN6 1383 aa29.36■■■□□ 2.29
HDAC7-220ENST00000471235 MED14O60244 1454 aa29.36■■■□□ 2.29
HDAC7-220ENST00000471235 HRCP23327 699 aa29.34■■■□□ 2.29
HDAC7-220ENST00000471235 DMRT2Q9Y5R5 561 aa29.33■■■□□ 2.29
HDAC7-220ENST00000471235 FOXD1Q16676 465 aa29.32■■■□□ 2.28
HDAC7-220ENST00000471235 ANKLE2Q86XL3 938 aa29.32■■■□□ 2.28
HDAC7-220ENST00000471235 NPHP4O75161 1426 aaPredicted RBP29.31■■■□□ 2.28
HDAC7-220ENST00000471235 TRIM26Q12899 539 aaPredicted RBP29.31■■■□□ 2.28
HDAC7-220ENST00000471235 ZFYVE9O95405 1425 aa29.3■■■□□ 2.28
HDAC7-220ENST00000471235 CHGAP10645 457 aaKnown RBP29.27■■■□□ 2.28
HDAC7-220ENST00000471235 RIMS2Q9UQ26 1411 aa29.26■■■□□ 2.27
HDAC7-220ENST00000471235 LTKP29376 864 aa29.25■■■□□ 2.27
HDAC7-220ENST00000471235 PPLO60437 1756 aa29.24■■■□□ 2.27
HDAC7-220ENST00000471235 TXNDC2Q86VQ3 553 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms