RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
LMNA-212ENST00000470835 KANK4Q5T7N3 995 aaPredicted RBP27.38■■□□□ 1.97
LMNA-212ENST00000470835 MYOM3Q5VTT5 1437 aa27.38■■□□□ 1.97
LMNA-212ENST00000470835 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
LMNA-212ENST00000470835 TCOF1Q13428 1488 aaKnown RBP27.38■■□□□ 1.97
LMNA-212ENST00000470835 RNF17Q9BXT8 1623 aaKnown RBP27.38■■□□□ 1.97
LMNA-212ENST00000470835 TSPY4P0CV99 314 aa27.37■■□□□ 1.97
LMNA-212ENST00000470835 TSPY10P0CW01 314 aa27.37■■□□□ 1.97
LMNA-212ENST00000470835 PZPP20742 1482 aa27.37■■□□□ 1.97
LMNA-212ENST00000470835 NCKAP5LQ9HCH0 1330 aa27.37■■□□□ 1.97
LMNA-212ENST00000470835 POLR1AO95602 1720 aaPredicted RBP27.36■■□□□ 1.97
LMNA-212ENST00000470835 MIA2Q96PC5 1412 aa27.35■■□□□ 1.97
LMNA-212ENST00000470835 EIF2AK4Q9P2K8 1649 aaKnown RBP27.35■■□□□ 1.97
LMNA-212ENST00000470835 ZC3H13Q5T200 1668 aaKnown RBP27.33■■□□□ 1.97
LMNA-212ENST00000470835 IQSEC2Q5JU85 1478 aa27.32■■□□□ 1.96
LMNA-212ENST00000470835 WASHC2CQ9Y4E1 1318 aa27.32■■□□□ 1.96
LMNA-212ENST00000470835 TNRQ92752 1358 aa27.32■■□□□ 1.96
LMNA-212ENST00000470835 CROCC2H7BZ55 1655 aa27.31■■□□□ 1.96
LMNA-212ENST00000470835 PKD2Q13563 968 aa27.31■■□□□ 1.96
LMNA-212ENST00000470835 FBXO31Q5XUX0 539 aaPredicted RBP27.29■■□□□ 1.96
LMNA-212ENST00000470835 CEP152O94986 1710 aa27.27■■□□□ 1.96
LMNA-212ENST00000470835 MROH1Q8NDA8 1641 aa27.27■■□□□ 1.96
LMNA-212ENST00000470835 ABCC3O15438 1527 aa27.26■■□□□ 1.96
LMNA-212ENST00000470835 ZNF335Q9H4Z2 1342 aaPredicted RBP27.26■■□□□ 1.95
LMNA-212ENST00000470835 PTPN23Q9H3S7 1636 aa27.26■■□□□ 1.95
LMNA-212ENST00000470835 NEURL4Q96JN8 1562 aa27.24■■□□□ 1.95
LMNA-212ENST00000470835 DUOX2Q9NRD8 1548 aa27.23■■□□□ 1.95
LMNA-212ENST00000470835 NLRP1Q9C000 1473 aa27.22■■□□□ 1.95
LMNA-212ENST00000470835 SHANK2Q9UPX8 1470 aa27.2■■□□□ 1.95
LMNA-212ENST00000470835 APLP2Q06481 763 aa27.2■■□□□ 1.94
LMNA-212ENST00000470835 CFAP65Q6ZU64 1925 aaKnown RBP27.2■■□□□ 1.94
LMNA-212ENST00000470835 SPATA31D1Q6ZQQ2 1576 aa27.19■■□□□ 1.94
LMNA-212ENST00000470835 UGGT1Q9NYU2 1555 aa27.19■■□□□ 1.94
LMNA-212ENST00000470835 PRDM15P57071 1507 aaPredicted RBP27.15■■□□□ 1.94
LMNA-212ENST00000470835 ABCC5O15440 1437 aa27.15■■□□□ 1.94
LMNA-212ENST00000470835 ERVK-7P63135 1459 aa27.14■■□□□ 1.94
LMNA-212ENST00000470835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.14■■□□□ 1.94
LMNA-212ENST00000470835 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
LMNA-212ENST00000470835 DEPDC5O75140 1603 aa27.14■■□□□ 1.94
LMNA-212ENST00000470835 FGD6Q6ZV73 1430 aa27.14■■□□□ 1.93
LMNA-212ENST00000470835 DAPK1P53355 1430 aa27.12■■□□□ 1.93
LMNA-212ENST00000470835 ERBINQ96RT1 1412 aa27.12■■□□□ 1.93
LMNA-212ENST00000470835 THEMISQ8N1K5 641 aaPredicted RBP27.1■■□□□ 1.93
LMNA-212ENST00000470835 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
LMNA-212ENST00000470835 UBR1Q8IWV7 1749 aa27.09■■□□□ 1.93
LMNA-212ENST00000470835 CPS1P31327 1500 aa27.07■■□□□ 1.92
LMNA-212ENST00000470835 ANKLE2Q86XL3 938 aa27.07■■□□□ 1.92
LMNA-212ENST00000470835 MED14O60244 1454 aa27.06■■□□□ 1.92
LMNA-212ENST00000470835 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
LMNA-212ENST00000470835 UBAP1LF5GYI3 381 aa27.05■■□□□ 1.92
LMNA-212ENST00000470835 RRP7BPQ9NSQ0 103 aa27.05■■□□□ 1.92
LMNA-212ENST00000470835 NPHP4O75161 1426 aaPredicted RBP27.05■■□□□ 1.92
LMNA-212ENST00000470835 DISP3Q9P2K9 1392 aa27.03■■□□□ 1.92
LMNA-212ENST00000470835 ARHGAP31Q2M1Z3 1444 aa27.01■■□□□ 1.91
LMNA-212ENST00000470835 ANKRD30AQ9BXX3 1397 aa26.98■■□□□ 1.91
LMNA-212ENST00000470835 STRCP1A6NGW2 1772 aa26.97■■□□□ 1.91
LMNA-212ENST00000470835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.96■■□□□ 1.91
LMNA-212ENST00000470835 PIK3C2BO00750 1634 aa26.96■■□□□ 1.91
LMNA-212ENST00000470835 KANK1Q14678 1352 aa26.96■■□□□ 1.91
LMNA-212ENST00000470835 CHIC2Q9UKJ5 165 aa26.95■■□□□ 1.9
LMNA-212ENST00000470835 LMTK2Q8IWU2 1503 aa26.93■■□□□ 1.9
LMNA-212ENST00000470835 ADGRL2O95490 1459 aa26.93■■□□□ 1.9
LMNA-212ENST00000470835 SYNMO15061 1565 aa26.92■■□□□ 1.9
LMNA-212ENST00000470835 SCAF11Q99590 1463 aaKnown RBP26.92■■□□□ 1.9
LMNA-212ENST00000470835 SLIT1O75093 1534 aa26.91■■□□□ 1.9
LMNA-212ENST00000470835 ARHGAP23Q9P227 1491 aa26.91■■□□□ 1.9
LMNA-212ENST00000470835 KDM5AP29375 1690 aaKnown RBP26.89■■□□□ 1.9
LMNA-212ENST00000470835 EFCAB6Q5THR3 1501 aa26.89■■□□□ 1.89
LMNA-212ENST00000470835 SCAF1Q9H7N4 1312 aaKnown RBP26.87■■□□□ 1.89
LMNA-212ENST00000470835 FAM50AQ14320 339 aaKnown RBP26.86■■□□□ 1.89
LMNA-212ENST00000470835 TOM1O60784 492 aa26.85■■□□□ 1.89
LMNA-212ENST00000470835 PIP4K2BP78356 416 aa26.84■■□□□ 1.89
LMNA-212ENST00000470835 ILDR2Q71H61 639 aa26.84■■□□□ 1.89
LMNA-212ENST00000470835 ALKQ9UM73 1620 aa26.83■■□□□ 1.89
LMNA-212ENST00000470835 LRRC7Q96NW7 1537 aa26.83■■□□□ 1.89
LMNA-212ENST00000470835 LTKP29376 864 aa26.8■■□□□ 1.88
LMNA-212ENST00000470835 TXNDC2Q86VQ3 553 aa26.8■■□□□ 1.88
LMNA-212ENST00000470835 ANKRD50Q9ULJ7 1429 aa26.8■■□□□ 1.88
LMNA-212ENST00000470835 TMEM2Q9UHN6 1383 aa26.79■■□□□ 1.88
LMNA-212ENST00000470835 NOS1P29475 1434 aa26.78■■□□□ 1.88
LMNA-212ENST00000470835 ADGRB3O60242 1522 aa26.78■■□□□ 1.88
LMNA-212ENST00000470835 TET3O43151 1660 aa26.78■■□□□ 1.88
LMNA-212ENST00000470835 XIRP1Q702N8 1843 aaKnown RBP26.78■■□□□ 1.88
LMNA-212ENST00000470835 STAG3Q9UJ98 1225 aa26.77■■□□□ 1.88
LMNA-212ENST00000470835 EID1Q9Y6B2 187 aa26.77■■□□□ 1.88
LMNA-212ENST00000470835 GCC2Q8IWJ2 1684 aa26.76■■□□□ 1.87
LMNA-212ENST00000470835 HSPA1LP34931 641 aa26.76■■□□□ 1.87
LMNA-212ENST00000470835 UNC13BO14795 1591 aa26.75■■□□□ 1.87
LMNA-212ENST00000470835 MYO5BQ9ULV0 1848 aa26.75■■□□□ 1.87
LMNA-212ENST00000470835 IDI1Q13907 227 aa26.74■■□□□ 1.87
LMNA-212ENST00000470835 RPRD2Q5VT52 1461 aaKnown RBP26.74■■□□□ 1.87
LMNA-212ENST00000470835 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
LMNA-212ENST00000470835 E9PCH4 1651 aa26.66■■□□□ 1.86
LMNA-212ENST00000470835 SOCS7O14512 581 aa26.66■■□□□ 1.86
LMNA-212ENST00000470835 SLC52A1Q9NWF4 448 aa26.65■■□□□ 1.86
LMNA-212ENST00000470835 IQGAP3Q86VI3 1631 aa26.65■■□□□ 1.86
LMNA-212ENST00000470835 ROCK1Q13464 1354 aa26.64■■□□□ 1.86
LMNA-212ENST00000470835 TMEM131LA2VDJ0 1609 aa26.63■■□□□ 1.85
LMNA-212ENST00000470835 NWD1Q149M9 1564 aa26.6■■□□□ 1.85
LMNA-212ENST00000470835 SLC26A8Q96RN1 970 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms