RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 A2ML1A8K2U0 1454 aa30.72■■■□□ 2.51
GCFC2-207ENST00000470503 WASHC2CQ9Y4E1 1318 aa30.71■■■□□ 2.51
GCFC2-207ENST00000470503 ARHGEF5Q12774 1597 aa30.7■■■□□ 2.5
GCFC2-207ENST00000470503 LRRC9Q6ZRR7 1453 aa30.68■■■□□ 2.5
GCFC2-207ENST00000470503 TNRQ92752 1358 aa30.66■■■□□ 2.5
GCFC2-207ENST00000470503 PZPP20742 1482 aa30.66■■■□□ 2.5
GCFC2-207ENST00000470503 KDM5DQ9BY66 1539 aa30.66■■■□□ 2.5
GCFC2-207ENST00000470503 MAP3K1Q13233 1512 aa30.65■■■□□ 2.5
GCFC2-207ENST00000470503 ZNF335Q9H4Z2 1342 aaPredicted RBP30.65■■■□□ 2.5
GCFC2-207ENST00000470503 FBXO31Q5XUX0 539 aaPredicted RBP30.62■■■□□ 2.49
GCFC2-207ENST00000470503 LOC105371045A0A1W2PR82 267 aa30.61■■■□□ 2.49
GCFC2-207ENST00000470503 MIA2Q96PC5 1412 aa30.6■■■□□ 2.49
GCFC2-207ENST00000470503 DNMT1P26358 1616 aaKnown RBP30.59■■■□□ 2.49
GCFC2-207ENST00000470503 THEMISQ8N1K5 641 aaPredicted RBP30.59■■■□□ 2.49
GCFC2-207ENST00000470503 DISP3Q9P2K9 1392 aa30.57■■■□□ 2.48
GCFC2-207ENST00000470503 NLRP1Q9C000 1473 aa30.56■■■□□ 2.48
GCFC2-207ENST00000470503 ANKLE2Q86XL3 938 aa30.55■■■□□ 2.48
GCFC2-207ENST00000470503 MAST1Q9Y2H9 1570 aa30.54■■■□□ 2.48
GCFC2-207ENST00000470503 UBAP1LF5GYI3 381 aa30.54■■■□□ 2.48
GCFC2-207ENST00000470503 KANK4Q5T7N3 995 aaPredicted RBP30.53■■■□□ 2.48
GCFC2-207ENST00000470503 MYOM3Q5VTT5 1437 aa30.53■■■□□ 2.48
GCFC2-207ENST00000470503 RNF17Q9BXT8 1623 aaKnown RBP30.46■■■□□ 2.47
GCFC2-207ENST00000470503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.45■■■□□ 2.47
GCFC2-207ENST00000470503 APLP2Q06481 763 aa30.45■■■□□ 2.47
GCFC2-207ENST00000470503 UGGT1Q9NYU2 1555 aa30.45■■■□□ 2.46
GCFC2-207ENST00000470503 CPS1P31327 1500 aa30.44■■■□□ 2.46
GCFC2-207ENST00000470503 EIF2AK4Q9P2K8 1649 aaKnown RBP30.44■■■□□ 2.46
GCFC2-207ENST00000470503 ABCC3O15438 1527 aa30.42■■■□□ 2.46
GCFC2-207ENST00000470503 MED14O60244 1454 aa30.41■■■□□ 2.46
GCFC2-207ENST00000470503 SHANK2Q9UPX8 1470 aa30.41■■■□□ 2.46
GCFC2-207ENST00000470503 ZC3H13Q5T200 1668 aaKnown RBP30.41■■■□□ 2.46
GCFC2-207ENST00000470503 NEURL4Q96JN8 1562 aa30.41■■■□□ 2.46
GCFC2-207ENST00000470503 DUOX2Q9NRD8 1548 aa30.4■■■□□ 2.46
GCFC2-207ENST00000470503 POLR1AO95602 1720 aaPredicted RBP30.39■■■□□ 2.46
GCFC2-207ENST00000470503 SPATA31D1Q6ZQQ2 1576 aa30.39■■■□□ 2.46
GCFC2-207ENST00000470503 TOM1O60784 492 aa30.38■■■□□ 2.45
GCFC2-207ENST00000470503 NPHP4O75161 1426 aaPredicted RBP30.38■■■□□ 2.45
GCFC2-207ENST00000470503 ILDR2Q71H61 639 aa30.37■■■□□ 2.45
GCFC2-207ENST00000470503 DEPDC5O75140 1603 aa30.36■■■□□ 2.45
GCFC2-207ENST00000470503 ERVK-7P63135 1459 aa30.35■■■□□ 2.45
GCFC2-207ENST00000470503 SOCS7O14512 581 aa30.34■■■□□ 2.45
GCFC2-207ENST00000470503 KIF15Q9NS87 1388 aa30.33■■■□□ 2.45
GCFC2-207ENST00000470503 ARHGAP31Q2M1Z3 1444 aa30.31■■■□□ 2.44
GCFC2-207ENST00000470503 ERBINQ96RT1 1412 aa30.31■■■□□ 2.44
GCFC2-207ENST00000470503 ABCC5O15440 1437 aa30.3■■■□□ 2.44
GCFC2-207ENST00000470503 MROH1Q8NDA8 1641 aa30.29■■■□□ 2.44
GCFC2-207ENST00000470503 RRP7BPQ9NSQ0 103 aa30.27■■■□□ 2.44
GCFC2-207ENST00000470503 VWDEQ8N2E2 1590 aa30.27■■■□□ 2.44
GCFC2-207ENST00000470503 KANK1Q14678 1352 aa30.24■■■□□ 2.43
GCFC2-207ENST00000470503 DAPK1P53355 1430 aa30.23■■■□□ 2.43
GCFC2-207ENST00000470503 PRDM15P57071 1507 aaPredicted RBP30.23■■■□□ 2.43
GCFC2-207ENST00000470503 PTPN23Q9H3S7 1636 aa30.23■■■□□ 2.43
GCFC2-207ENST00000470503 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
GCFC2-207ENST00000470503 FGD6Q6ZV73 1430 aa30.22■■■□□ 2.43
GCFC2-207ENST00000470503 IQGAP1P46940 1657 aa30.21■■■□□ 2.43
GCFC2-207ENST00000470503 ANKRD30AQ9BXX3 1397 aa30.21■■■□□ 2.43
GCFC2-207ENST00000470503 PIP4K2BP78356 416 aa30.21■■■□□ 2.43
GCFC2-207ENST00000470503 HSPA1LP34931 641 aa30.19■■■□□ 2.42
GCFC2-207ENST00000470503 SCAF11Q99590 1463 aaKnown RBP30.18■■■□□ 2.42
GCFC2-207ENST00000470503 TXNDC2Q86VQ3 553 aa30.17■■■□□ 2.42
GCFC2-207ENST00000470503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.17■■■□□ 2.425e-8■□□□□ 10
GCFC2-207ENST00000470503 EID1Q9Y6B2 187 aa30.17■■■□□ 2.42
GCFC2-207ENST00000470503 CEP152O94986 1710 aa30.16■■■□□ 2.42
GCFC2-207ENST00000470503 ARHGAP23Q9P227 1491 aa30.16■■■□□ 2.42
GCFC2-207ENST00000470503 CROCC2H7BZ55 1655 aa30.16■■■□□ 2.42
GCFC2-207ENST00000470503 SLIT1O75093 1534 aa30.15■■■□□ 2.42
GCFC2-207ENST00000470503 UBR1Q8IWV7 1749 aa30.13■■■□□ 2.41
GCFC2-207ENST00000470503 LTKP29376 864 aa30.12■■■□□ 2.41
GCFC2-207ENST00000470503 STAG3Q9UJ98 1225 aa30.11■■■□□ 2.41
GCFC2-207ENST00000470503 LMTK2Q8IWU2 1503 aa30.11■■■□□ 2.41
GCFC2-207ENST00000470503 LRRC7Q96NW7 1537 aa30.11■■■□□ 2.41
GCFC2-207ENST00000470503 CHIC2Q9UKJ5 165 aa30.1■■■□□ 2.41
GCFC2-207ENST00000470503 TMEM2Q9UHN6 1383 aa30.08■■■□□ 2.41
GCFC2-207ENST00000470503 CFAP65Q6ZU64 1925 aaKnown RBP30.07■■■□□ 2.4
GCFC2-207ENST00000470503 SYNMO15061 1565 aa30.07■■■□□ 2.4
GCFC2-207ENST00000470503 IDI1Q13907 227 aa30.04■■■□□ 2.4
GCFC2-207ENST00000470503 ADGRL2O95490 1459 aa30.04■■■□□ 2.4
GCFC2-207ENST00000470503 SLC52A1Q9NWF4 448 aa30.03■■■□□ 2.4
GCFC2-207ENST00000470503 ALKQ9UM73 1620 aa30■■■□□ 2.39
GCFC2-207ENST00000470503 KDM5AP29375 1690 aaKnown RBP30■■■□□ 2.39
GCFC2-207ENST00000470503 NOS1P29475 1434 aa29.99■■■□□ 2.39
GCFC2-207ENST00000470503 STRCP1A6NGW2 1772 aa29.98■■■□□ 2.39
GCFC2-207ENST00000470503 EFCAB6Q5THR3 1501 aa29.98■■■□□ 2.39
GCFC2-207ENST00000470503 FAM50AQ14320 339 aaKnown RBP29.98■■■□□ 2.39
GCFC2-207ENST00000470503 PIK3C2BO00750 1634 aa29.97■■■□□ 2.39
GCFC2-207ENST00000470503 ANKRD50Q9ULJ7 1429 aa29.96■■■□□ 2.39
GCFC2-207ENST00000470503 MED1Q15648 1581 aaPredicted RBP29.95■■■□□ 2.39
GCFC2-207ENST00000470503 RPRD2Q5VT52 1461 aaKnown RBP29.94■■■□□ 2.38
GCFC2-207ENST00000470503 KCNA6P17658 529 aa29.93■■■□□ 2.38
GCFC2-207ENST00000470503 HDGFP51858 240 aaKnown RBP29.9■■■□□ 2.38
GCFC2-207ENST00000470503 PHF23Q9BUL5 403 aaPredicted RBP29.88■■■□□ 2.37
GCFC2-207ENST00000470503 ADGRB3O60242 1522 aa29.86■■■□□ 2.37
GCFC2-207ENST00000470503 FAM135BQ49AJ0 1406 aa29.84■■■□□ 2.37
GCFC2-207ENST00000470503 TET3O43151 1660 aa29.84■■■□□ 2.37
GCFC2-207ENST00000470503 TMEM94Q12767 1356 aa29.83■■■□□ 2.37
GCFC2-207ENST00000470503 SLC26A8Q96RN1 970 aa29.83■■■□□ 2.37
GCFC2-207ENST00000470503 PROSER2Q86WR7 435 aaPredicted RBP29.82■■■□□ 2.36
GCFC2-207ENST00000470503 ROCK1Q13464 1354 aa29.8■■■□□ 2.36
GCFC2-207ENST00000470503 BCANQ96GW7 911 aa29.79■■■□□ 2.36
GCFC2-207ENST00000470503 NKTRP30414 1462 aaKnown RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms