RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 MIA2Q96PC5 1412 aa18.17■□□□□ 0.5
HLA-C-206ENST00000470363 PKD2Q13563 968 aa18.17■□□□□ 0.5
HLA-C-206ENST00000470363 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
HLA-C-206ENST00000470363 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
HLA-C-206ENST00000470363 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
HLA-C-206ENST00000470363 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
HLA-C-206ENST00000470363 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
HLA-C-206ENST00000470363 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.5
HLA-C-206ENST00000470363 PZPP20742 1482 aa18.14■□□□□ 0.5
HLA-C-206ENST00000470363 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
HLA-C-206ENST00000470363 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
HLA-C-206ENST00000470363 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
HLA-C-206ENST00000470363 TNRQ92752 1358 aa18.12■□□□□ 0.49
HLA-C-206ENST00000470363 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
HLA-C-206ENST00000470363 IQSEC2Q5JU85 1478 aa18.1■□□□□ 0.49
HLA-C-206ENST00000470363 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
HLA-C-206ENST00000470363 RNF17Q9BXT8 1623 aaKnown RBP18.07■□□□□ 0.48
HLA-C-206ENST00000470363 ABCC5O15440 1437 aa18.06■□□□□ 0.48
HLA-C-206ENST00000470363 ABCC3O15438 1527 aa18.05■□□□□ 0.48
HLA-C-206ENST00000470363 MROH1Q8NDA8 1641 aa18.05■□□□□ 0.48
HLA-C-206ENST00000470363 NLRP1Q9C000 1473 aa18.03■□□□□ 0.48
HLA-C-206ENST00000470363 EIF2AK4Q9P2K8 1649 aaKnown RBP18.02■□□□□ 0.48
HLA-C-206ENST00000470363 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.48
HLA-C-206ENST00000470363 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.48
HLA-C-206ENST00000470363 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.47
HLA-C-206ENST00000470363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.47
HLA-C-206ENST00000470363 SHANK2Q9UPX8 1470 aa18.01■□□□□ 0.47
HLA-C-206ENST00000470363 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
HLA-C-206ENST00000470363 ANKLE2Q86XL3 938 aa18■□□□□ 0.47
HLA-C-206ENST00000470363 FGD6Q6ZV73 1430 aa17.99■□□□□ 0.47
HLA-C-206ENST00000470363 APLP2Q06481 763 aa17.99■□□□□ 0.47
HLA-C-206ENST00000470363 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
HLA-C-206ENST00000470363 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
HLA-C-206ENST00000470363 MED14O60244 1454 aa17.99■□□□□ 0.47
HLA-C-206ENST00000470363 DAPK1P53355 1430 aa17.98■□□□□ 0.47
HLA-C-206ENST00000470363 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
HLA-C-206ENST00000470363 ERVK-7P63135 1459 aa17.98■□□□□ 0.47
HLA-C-206ENST00000470363 UGGT1Q9NYU2 1555 aa17.98■□□□□ 0.47
HLA-C-206ENST00000470363 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
HLA-C-206ENST00000470363 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
HLA-C-206ENST00000470363 ERBINQ96RT1 1412 aa17.97■□□□□ 0.47
HLA-C-206ENST00000470363 PRDM15P57071 1507 aaPredicted RBP17.94■□□□□ 0.46
HLA-C-206ENST00000470363 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
HLA-C-206ENST00000470363 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
HLA-C-206ENST00000470363 NPHP4O75161 1426 aaPredicted RBP17.93■□□□□ 0.46
HLA-C-206ENST00000470363 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
HLA-C-206ENST00000470363 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
HLA-C-206ENST00000470363 VWDEQ8N2E2 1590 aa17.91■□□□□ 0.46
HLA-C-206ENST00000470363 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
HLA-C-206ENST00000470363 CPS1P31327 1500 aa17.9■□□□□ 0.46
HLA-C-206ENST00000470363 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
HLA-C-206ENST00000470363 CEP152O94986 1710 aa17.89■□□□□ 0.46
HLA-C-206ENST00000470363 LTKP29376 864 aa17.88■□□□□ 0.45
HLA-C-206ENST00000470363 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
HLA-C-206ENST00000470363 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
HLA-C-206ENST00000470363 LMTK2Q8IWU2 1503 aa17.88■□□□□ 0.45
HLA-C-206ENST00000470363 ILDR2Q71H61 639 aa17.87■□□□□ 0.45
HLA-C-206ENST00000470363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
HLA-C-206ENST00000470363 DISP3Q9P2K9 1392 aa17.86■□□□□ 0.45
HLA-C-206ENST00000470363 SLIT1O75093 1534 aa17.85■□□□□ 0.45
HLA-C-206ENST00000470363 UBR1Q8IWV7 1749 aa17.85■□□□□ 0.45
HLA-C-206ENST00000470363 IQGAP1P46940 1657 aa17.83■□□□□ 0.45
HLA-C-206ENST00000470363 KANK1Q14678 1352 aa17.83■□□□□ 0.45
HLA-C-206ENST00000470363 IDI1Q13907 227 aa17.83■□□□□ 0.44
HLA-C-206ENST00000470363 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
HLA-C-206ENST00000470363 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
HLA-C-206ENST00000470363 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
HLA-C-206ENST00000470363 NOS1P29475 1434 aa17.82■□□□□ 0.44
HLA-C-206ENST00000470363 TOM1O60784 492 aa17.82■□□□□ 0.44
HLA-C-206ENST00000470363 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
HLA-C-206ENST00000470363 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
HLA-C-206ENST00000470363 TMEM2Q9UHN6 1383 aa17.8■□□□□ 0.44
HLA-C-206ENST00000470363 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
HLA-C-206ENST00000470363 STRCP1A6NGW2 1772 aa17.8■□□□□ 0.44
HLA-C-206ENST00000470363 HSPA1LP34931 641 aa17.79■□□□□ 0.44
HLA-C-206ENST00000470363 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
HLA-C-206ENST00000470363 PIK3C2BO00750 1634 aa17.77■□□□□ 0.44
HLA-C-206ENST00000470363 SYNMO15061 1565 aa17.77■□□□□ 0.44
HLA-C-206ENST00000470363 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
HLA-C-206ENST00000470363 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
HLA-C-206ENST00000470363 EID1Q9Y6B2 187 aa17.76■□□□□ 0.43
HLA-C-206ENST00000470363 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
HLA-C-206ENST00000470363 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
HLA-C-206ENST00000470363 KDM5AP29375 1690 aaKnown RBP17.74■□□□□ 0.43
HLA-C-206ENST00000470363 ROCK1Q13464 1354 aa17.73■□□□□ 0.43
HLA-C-206ENST00000470363 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
HLA-C-206ENST00000470363 TET3O43151 1660 aa17.72■□□□□ 0.43
HLA-C-206ENST00000470363 SOCS7O14512 581 aa17.72■□□□□ 0.43
HLA-C-206ENST00000470363 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.43
HLA-C-206ENST00000470363 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
HLA-C-206ENST00000470363 KCNA6P17658 529 aa17.68■□□□□ 0.42
HLA-C-206ENST00000470363 ADGRB3O60242 1522 aa17.67■□□□□ 0.42
HLA-C-206ENST00000470363 ZFYVE9O95405 1425 aa17.66■□□□□ 0.42
HLA-C-206ENST00000470363 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
HLA-C-206ENST00000470363 UNC13BO14795 1591 aa17.66■□□□□ 0.42
HLA-C-206ENST00000470363 XIRP1Q702N8 1843 aaKnown RBP17.63■□□□□ 0.41
HLA-C-206ENST00000470363 TMEM94Q12767 1356 aa17.63■□□□□ 0.41
HLA-C-206ENST00000470363 PLEKHG1Q9ULL1 1385 aa17.61■□□□□ 0.41
HLA-C-206ENST00000470363 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
HLA-C-206ENST00000470363 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms