RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RNF17Q9BXT8 1623 aaKnown RBP21.83■■□□□ 1.08
TOP3B-215ENST00000470338 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
TOP3B-215ENST00000470338 NPATQ14207 1427 aa21.8■■□□□ 1.08
TOP3B-215ENST00000470338 RRP7BPQ9NSQ0 103 aa21.8■■□□□ 1.08
TOP3B-215ENST00000470338 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
TOP3B-215ENST00000470338 KDM5DQ9BY66 1539 aa21.79■■□□□ 1.08
TOP3B-215ENST00000470338 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
TOP3B-215ENST00000470338 ANKRD30AQ9BXX3 1397 aa21.78■■□□□ 1.08
TOP3B-215ENST00000470338 HSPA2P54652 639 aa21.78■■□□□ 1.08
TOP3B-215ENST00000470338 ADGRL2O95490 1459 aa21.77■■□□□ 1.08
TOP3B-215ENST00000470338 PTPRKQ15262 1439 aa21.77■■□□□ 1.08
TOP3B-215ENST00000470338 UHRF1BP1Q6BDS2 1440 aa21.77■■□□□ 1.08
TOP3B-215ENST00000470338 ERBINQ96RT1 1412 aa21.77■■□□□ 1.08
TOP3B-215ENST00000470338 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.07
TOP3B-215ENST00000470338 MROH1Q8NDA8 1641 aa21.76■■□□□ 1.07
TOP3B-215ENST00000470338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
TOP3B-215ENST00000470338 ZC3H13Q5T200 1668 aaKnown RBP21.73■■□□□ 1.07
TOP3B-215ENST00000470338 ABCC3O15438 1527 aa21.71■■□□□ 1.07
TOP3B-215ENST00000470338 DEPDC5O75140 1603 aa21.71■■□□□ 1.07
TOP3B-215ENST00000470338 PZPP20742 1482 aa21.71■■□□□ 1.07
TOP3B-215ENST00000470338 CEP152O94986 1710 aa21.69■■□□□ 1.06
TOP3B-215ENST00000470338 PRDM15P57071 1507 aaPredicted RBP21.69■■□□□ 1.06
TOP3B-215ENST00000470338 MYO3AQ8NEV4 1616 aa21.68■■□□□ 1.06
TOP3B-215ENST00000470338 STRCQ7RTU9 1775 aa21.67■■□□□ 1.06
TOP3B-215ENST00000470338 ZNF142P52746 1687 aaPredicted RBP21.67■■□□□ 1.06
TOP3B-215ENST00000470338 FBXO31Q5XUX0 539 aaPredicted RBP21.67■■□□□ 1.06
TOP3B-215ENST00000470338 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
TOP3B-215ENST00000470338 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
TOP3B-215ENST00000470338 CAMSAP1Q5T5Y3 1602 aa21.65■■□□□ 1.06
TOP3B-215ENST00000470338 CFAP65Q6ZU64 1925 aaKnown RBP21.65■■□□□ 1.06
TOP3B-215ENST00000470338 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
TOP3B-215ENST00000470338 TNRQ92752 1358 aa21.62■■□□□ 1.05
TOP3B-215ENST00000470338 VWDEQ8N2E2 1590 aa21.62■■□□□ 1.05
TOP3B-215ENST00000470338 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
TOP3B-215ENST00000470338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.05
TOP3B-215ENST00000470338 KANK1Q14678 1352 aa21.61■■□□□ 1.05
TOP3B-215ENST00000470338 ARHGAP31Q2M1Z3 1444 aa21.6■■□□□ 1.05
TOP3B-215ENST00000470338 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
TOP3B-215ENST00000470338 ITGAEP38570 1179 aa21.59■■□□□ 1.05
TOP3B-215ENST00000470338 SPATA31D1Q6ZQQ2 1576 aa21.59■■□□□ 1.05
TOP3B-215ENST00000470338 LMTK2Q8IWU2 1503 aa21.59■■□□□ 1.05
TOP3B-215ENST00000470338 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
TOP3B-215ENST00000470338 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
TOP3B-215ENST00000470338 NLRP1Q9C000 1473 aa21.56■■□□□ 1.04
TOP3B-215ENST00000470338 PLA2R1Q13018 1463 aa21.54■■□□□ 1.04
TOP3B-215ENST00000470338 UNC13BO14795 1591 aa21.53■■□□□ 1.04
TOP3B-215ENST00000470338 PTPRTO14522 1441 aa21.52■■□□□ 1.04
TOP3B-215ENST00000470338 EFCAB6Q5THR3 1501 aa21.5■■□□□ 1.03
TOP3B-215ENST00000470338 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
TOP3B-215ENST00000470338 TET3O43151 1660 aa21.48■■□□□ 1.03
TOP3B-215ENST00000470338 PKD2Q13563 968 aa21.48■■□□□ 1.03
TOP3B-215ENST00000470338 NCKAP5LQ9HCH0 1330 aa21.48■■□□□ 1.03
TOP3B-215ENST00000470338 THEMISQ8N1K5 641 aaPredicted RBP21.47■■□□□ 1.03
TOP3B-215ENST00000470338 GCC2Q8IWJ2 1684 aa21.47■■□□□ 1.03
TOP3B-215ENST00000470338 IQGAP3Q86VI3 1631 aa21.45■■□□□ 1.02
TOP3B-215ENST00000470338 POLR1AO95602 1720 aaPredicted RBP21.44■■□□□ 1.02
TOP3B-215ENST00000470338 UBR1Q8IWV7 1749 aa21.44■■□□□ 1.02
TOP3B-215ENST00000470338 RPRD2Q5VT52 1461 aaKnown RBP21.44■■□□□ 1.02
TOP3B-215ENST00000470338 NOS1P29475 1434 aa21.43■■□□□ 1.02
TOP3B-215ENST00000470338 NAIPQ13075 1403 aa21.43■■□□□ 1.02
TOP3B-215ENST00000470338 SYNMO15061 1565 aa21.41■■□□□ 1.02
TOP3B-215ENST00000470338 NUP155O75694 1391 aa21.4■■□□□ 1.02
TOP3B-215ENST00000470338 E9PCH4 1651 aa21.4■■□□□ 1.02
TOP3B-215ENST00000470338 PIK3C2BO00750 1634 aa21.4■■□□□ 1.02
TOP3B-215ENST00000470338 HFM1A2PYH4 1435 aa21.39■■□□□ 1.02
TOP3B-215ENST00000470338 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
TOP3B-215ENST00000470338 KDM5AP29375 1690 aaKnown RBP21.39■■□□□ 1.01
TOP3B-215ENST00000470338 NEURL4Q96JN8 1562 aa21.39■■□□□ 1.01
TOP3B-215ENST00000470338 IDI1Q13907 227 aa21.37■■□□□ 1.01
TOP3B-215ENST00000470338 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
TOP3B-215ENST00000470338 MED14O60244 1454 aa21.35■■□□□ 1.01
TOP3B-215ENST00000470338 CERKQ8TCT0 537 aa21.34■■□□□ 1.01
TOP3B-215ENST00000470338 SLIT1O75093 1534 aa21.34■■□□□ 1.01
TOP3B-215ENST00000470338 LTBP4Q8N2S1 1624 aa21.33■■□□□ 1.01
TOP3B-215ENST00000470338 ARHGAP23Q9P227 1491 aa21.33■■□□□ 1.01
TOP3B-215ENST00000470338 ILDR1Q86SU0 546 aaPredicted RBP21.32■■□□□ 1
TOP3B-215ENST00000470338 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
TOP3B-215ENST00000470338 IQGAP1P46940 1657 aa21.3■■□□□ 1
TOP3B-215ENST00000470338 NPHP4O75161 1426 aaPredicted RBP21.29■■□□□ 1
TOP3B-215ENST00000470338 MYO5BQ9ULV0 1848 aa21.29■■□□□ 1
TOP3B-215ENST00000470338 ADGRB3O60242 1522 aa21.29■■□□□ 1
TOP3B-215ENST00000470338 TMEM2Q9UHN6 1383 aa21.28■■□□□ 1
TOP3B-215ENST00000470338 LTKP29376 864 aa21.28■■□□□ 1
TOP3B-215ENST00000470338 FBXO41Q8TF61 875 aa21.28■■□□□ 1
TOP3B-215ENST00000470338 SCAF11Q99590 1463 aaKnown RBP21.27■■□□□ 1
TOP3B-215ENST00000470338 ZNF335Q9H4Z2 1342 aaPredicted RBP21.27■□□□□ 0.99
TOP3B-215ENST00000470338 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
TOP3B-215ENST00000470338 SPHKAPQ2M3C7 1700 aa21.26■□□□□ 0.99
TOP3B-215ENST00000470338 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
TOP3B-215ENST00000470338 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
TOP3B-215ENST00000470338 TRIM52Q96A61 297 aa21.23■□□□□ 0.99
TOP3B-215ENST00000470338 IQSEC2Q5JU85 1478 aa21.2■□□□□ 0.98
TOP3B-215ENST00000470338 ZFYVE9O95405 1425 aa21.18■□□□□ 0.98
TOP3B-215ENST00000470338 SLC4A1APQ9BWU0 796 aaKnown RBP21.17■□□□□ 0.98
TOP3B-215ENST00000470338 STRCP1A6NGW2 1772 aa21.16■□□□□ 0.98
TOP3B-215ENST00000470338 CPS1P31327 1500 aa21.16■□□□□ 0.98
TOP3B-215ENST00000470338 SETD5Q9C0A6 1442 aa21.16■□□□□ 0.98
TOP3B-215ENST00000470338 TRPM2O94759 1503 aa21.15■□□□□ 0.98
TOP3B-215ENST00000470338 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
TOP3B-215ENST00000470338 CHGAP10645 457 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms