RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 FBXO31Q5XUX0 539 aaPredicted RBP30.71■■■□□ 2.51
NCKIPSD-209ENST00000470006 CPS1P31327 1500 aa30.71■■■□□ 2.51
NCKIPSD-209ENST00000470006 KIF3BO15066 747 aa30.69■■■□□ 2.5
NCKIPSD-209ENST00000470006 SHANK2Q9UPX8 1470 aa30.69■■■□□ 2.5
NCKIPSD-209ENST00000470006 ANKLE2Q86XL3 938 aa30.68■■■□□ 2.5
NCKIPSD-209ENST00000470006 PHF23Q9BUL5 403 aaPredicted RBP30.68■■■□□ 2.5
NCKIPSD-209ENST00000470006 DHX29Q7Z478 1369 aaKnown RBP30.66■■■□□ 2.5
NCKIPSD-209ENST00000470006 WASHC2CQ9Y4E1 1318 aa30.64■■■□□ 2.5
NCKIPSD-209ENST00000470006 RTEL1-TNFRSF6BF6WH68 1400 aa30.64■■■□□ 2.49
NCKIPSD-209ENST00000470006 NEURL4Q96JN8 1562 aa30.63■■■□□ 2.49
NCKIPSD-209ENST00000470006 THEMISQ8N1K5 641 aaPredicted RBP30.63■■■□□ 2.49
NCKIPSD-209ENST00000470006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.63■■■□□ 2.49
NCKIPSD-209ENST00000470006 TIAM1Q13009 1591 aa30.62■■■□□ 2.49
NCKIPSD-209ENST00000470006 MBD5Q9P267 1494 aa30.62■■■□□ 2.49
NCKIPSD-209ENST00000470006 SENP3Q9H4L4 574 aaPredicted RBP30.61■■■□□ 2.49
NCKIPSD-209ENST00000470006 PZPP20742 1482 aa30.59■■■□□ 2.49
NCKIPSD-209ENST00000470006 KDM5DQ9BY66 1539 aa30.58■■■□□ 2.49
NCKIPSD-209ENST00000470006 EHBP1L1Q8N3D4 1523 aa30.54■■■□□ 2.48
NCKIPSD-209ENST00000470006 NPHP4O75161 1426 aaPredicted RBP30.54■■■□□ 2.48
NCKIPSD-209ENST00000470006 FAM135AQ9P2D6 1515 aa30.53■■■□□ 2.48
NCKIPSD-209ENST00000470006 MIA2Q96PC5 1412 aa30.53■■■□□ 2.48
NCKIPSD-209ENST00000470006 VWDEQ8N2E2 1590 aa30.53■■■□□ 2.48
NCKIPSD-209ENST00000470006 UGGT1Q9NYU2 1555 aa30.53■■■□□ 2.48
NCKIPSD-209ENST00000470006 CCDC141Q6ZP82 1450 aa30.51■■■□□ 2.48
NCKIPSD-209ENST00000470006 NLRP1Q9C000 1473 aa30.5■■■□□ 2.47
NCKIPSD-209ENST00000470006 CEP162Q5TB80 1403 aa30.48■■■□□ 2.47
NCKIPSD-209ENST00000470006 RSPH4AQ5TD94 716 aa30.47■■■□□ 2.47
NCKIPSD-209ENST00000470006 DEPDC5O75140 1603 aa30.46■■■□□ 2.47
NCKIPSD-209ENST00000470006 MED14O60244 1454 aa30.45■■■□□ 2.47
NCKIPSD-209ENST00000470006 TSPY4P0CV99 314 aa30.45■■■□□ 2.47
NCKIPSD-209ENST00000470006 TSPY10P0CW01 314 aa30.45■■■□□ 2.47
NCKIPSD-209ENST00000470006 IQGAP1P46940 1657 aa30.45■■■□□ 2.46
NCKIPSD-209ENST00000470006 CAMSAP2Q08AD1 1489 aa30.44■■■□□ 2.46
NCKIPSD-209ENST00000470006 ALKQ9UM73 1620 aa30.41■■■□□ 2.46
NCKIPSD-209ENST00000470006 NCOA2Q15596 1464 aa30.38■■■□□ 2.45
NCKIPSD-209ENST00000470006 LRRC7Q96NW7 1537 aa30.37■■■□□ 2.45
NCKIPSD-209ENST00000470006 STRCP1A6NGW2 1772 aa30.36■■■□□ 2.45
NCKIPSD-209ENST00000470006 RNF17Q9BXT8 1623 aaKnown RBP30.33■■■□□ 2.45
NCKIPSD-209ENST00000470006 CFAP65Q6ZU64 1925 aaKnown RBP30.32■■■□□ 2.44
NCKIPSD-209ENST00000470006 SYNMO15061 1565 aa30.31■■■□□ 2.44
NCKIPSD-209ENST00000470006 ARHGEF5Q12774 1597 aa30.29■■■□□ 2.44
NCKIPSD-209ENST00000470006 ABCC3O15438 1527 aa30.29■■■□□ 2.44
NCKIPSD-209ENST00000470006 ZC3H13Q5T200 1668 aaKnown RBP30.27■■■□□ 2.44
NCKIPSD-209ENST00000470006 ERVK-7P63135 1459 aa30.26■■■□□ 2.44
NCKIPSD-209ENST00000470006 TXNDC2Q86VQ3 553 aa30.23■■■□□ 2.43
NCKIPSD-209ENST00000470006 SCAF11Q99590 1463 aaKnown RBP30.21■■■□□ 2.43
NCKIPSD-209ENST00000470006 UBR1Q8IWV7 1749 aa30.21■■■□□ 2.43
NCKIPSD-209ENST00000470006 CEP152O94986 1710 aa30.19■■■□□ 2.42
NCKIPSD-209ENST00000470006 RGS17Q9UGC6 210 aaPredicted RBP30.19■■■□□ 2.42
NCKIPSD-209ENST00000470006 LTKP29376 864 aa30.18■■■□□ 2.42
NCKIPSD-209ENST00000470006 EID1Q9Y6B2 187 aa30.18■■■□□ 2.42
NCKIPSD-209ENST00000470006 EIF2AK4Q9P2K8 1649 aaKnown RBP30.17■■■□□ 2.42
NCKIPSD-209ENST00000470006 MAST1Q9Y2H9 1570 aa30.15■■■□□ 2.42
NCKIPSD-209ENST00000470006 STAG3Q9UJ98 1225 aa30.13■■■□□ 2.41
NCKIPSD-209ENST00000470006 MROH1Q8NDA8 1641 aa30.11■■■□□ 2.41
NCKIPSD-209ENST00000470006 XIRP1Q702N8 1843 aaKnown RBP30.1■■■□□ 2.41
NCKIPSD-209ENST00000470006 SLIT1O75093 1534 aa30.08■■■□□ 2.41
NCKIPSD-209ENST00000470006 ARHGAP23Q9P227 1491 aa30.07■■■□□ 2.4
NCKIPSD-209ENST00000470006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.07■■■□□ 2.43e-6■■□□□ 13.5
NCKIPSD-209ENST00000470006 DUOX2Q9NRD8 1548 aa30.06■■■□□ 2.4
NCKIPSD-209ENST00000470006 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
NCKIPSD-209ENST00000470006 FAM135BQ49AJ0 1406 aa30.05■■■□□ 2.4
NCKIPSD-209ENST00000470006 POTEAQ6S8J7 498 aa30.03■■■□□ 2.4
NCKIPSD-209ENST00000470006 TMEM94Q12767 1356 aa30.02■■■□□ 2.4
NCKIPSD-209ENST00000470006 PROSER2Q86WR7 435 aaPredicted RBP30.01■■■□□ 2.39
NCKIPSD-209ENST00000470006 PIK3C2BO00750 1634 aa30■■■□□ 2.39
NCKIPSD-209ENST00000470006 MYOM3Q5VTT5 1437 aa30■■■□□ 2.39
NCKIPSD-209ENST00000470006 RRP7BPQ9NSQ0 103 aa30■■■□□ 2.39
NCKIPSD-209ENST00000470006 TMEM2Q9UHN6 1383 aa30■■■□□ 2.39
NCKIPSD-209ENST00000470006 ARHGAP31Q2M1Z3 1444 aa29.99■■■□□ 2.39
NCKIPSD-209ENST00000470006 RBM33Q96EV2 1170 aaKnown RBP29.99■■■□□ 2.39
NCKIPSD-209ENST00000470006 KIF15Q9NS87 1388 aa29.99■■■□□ 2.39
NCKIPSD-209ENST00000470006 KANK1Q14678 1352 aa29.96■■■□□ 2.39
NCKIPSD-209ENST00000470006 KCNA6P17658 529 aa29.96■■■□□ 2.39
NCKIPSD-209ENST00000470006 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
NCKIPSD-209ENST00000470006 BCANQ96GW7 911 aa29.96■■■□□ 2.39
NCKIPSD-209ENST00000470006 SLC26A8Q96RN1 970 aa29.96■■■□□ 2.39
NCKIPSD-209ENST00000470006 ROBO1Q9Y6N7 1651 aa29.95■■■□□ 2.39
NCKIPSD-209ENST00000470006 PRDM15P57071 1507 aaPredicted RBP29.95■■■□□ 2.38
NCKIPSD-209ENST00000470006 VPS8Q8N3P4 1428 aa29.92■■■□□ 2.38
NCKIPSD-209ENST00000470006 ERBINQ96RT1 1412 aa29.92■■■□□ 2.38
NCKIPSD-209ENST00000470006 EFCAB6Q5THR3 1501 aa29.91■■■□□ 2.38
NCKIPSD-209ENST00000470006 IDI1Q13907 227 aa29.91■■■□□ 2.38
NCKIPSD-209ENST00000470006 MSH6P52701 1360 aa29.86■■■□□ 2.37
NCKIPSD-209ENST00000470006 MAP3K1Q13233 1512 aa29.85■■■□□ 2.37
NCKIPSD-209ENST00000470006 ABCC5O15440 1437 aa29.84■■■□□ 2.37
NCKIPSD-209ENST00000470006 CROCC2H7BZ55 1655 aa29.83■■■□□ 2.37
NCKIPSD-209ENST00000470006 KDM5AP29375 1690 aaKnown RBP29.83■■■□□ 2.37
NCKIPSD-209ENST00000470006 SLAIN2Q9P270 581 aa29.83■■■□□ 2.37
NCKIPSD-209ENST00000470006 SETD1AO15047 1707 aaKnown RBP29.82■■■□□ 2.36
NCKIPSD-209ENST00000470006 PHLPP1O60346 1717 aa29.82■■■□□ 2.36
NCKIPSD-209ENST00000470006 TET3O43151 1660 aa29.82■■■□□ 2.36
NCKIPSD-209ENST00000470006 CHIC2Q9UKJ5 165 aa29.8■■■□□ 2.36
NCKIPSD-209ENST00000470006 NKTRP30414 1462 aaKnown RBP29.79■■■□□ 2.36
NCKIPSD-209ENST00000470006 JCADQ9P266 1359 aa29.78■■■□□ 2.36
NCKIPSD-209ENST00000470006 PTPN23Q9H3S7 1636 aa29.78■■■□□ 2.36
NCKIPSD-209ENST00000470006 DAPK1P53355 1430 aa29.76■■■□□ 2.35
NCKIPSD-209ENST00000470006 ADGRB3O60242 1522 aa29.75■■■□□ 2.35
NCKIPSD-209ENST00000470006 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
NCKIPSD-209ENST00000470006 PPP1R15AO75807 674 aaPredicted RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms