RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 DAPK1P53355 1430 aa30.19■■■□□ 2.42
GMDS-203ENST00000467288 DNMT1P26358 1616 aaKnown RBP30.18■■■□□ 2.42
GMDS-203ENST00000467288 CROCC2H7BZ55 1655 aa30.18■■■□□ 2.42
GMDS-203ENST00000467288 PTPRKQ15262 1439 aa30.17■■■□□ 2.42
GMDS-203ENST00000467288 STRCQ7RTU9 1775 aa30.15■■■□□ 2.42
GMDS-203ENST00000467288 PTPRTO14522 1441 aa30.14■■■□□ 2.42
GMDS-203ENST00000467288 KDM5DQ9BY66 1539 aa30.14■■■□□ 2.42
GMDS-203ENST00000467288 DUOX2Q9NRD8 1548 aa30.14■■■□□ 2.42
GMDS-203ENST00000467288 EIF2AK4Q9P2K8 1649 aaKnown RBP30.14■■■□□ 2.41
GMDS-203ENST00000467288 RNF17Q9BXT8 1623 aaKnown RBP30.12■■■□□ 2.41
GMDS-203ENST00000467288 KIF15Q9NS87 1388 aa30.11■■■□□ 2.41
GMDS-203ENST00000467288 WASHC2CQ9Y4E1 1318 aa30.1■■■□□ 2.41
GMDS-203ENST00000467288 RRP7BPQ9NSQ0 103 aa30.07■■■□□ 2.4
GMDS-203ENST00000467288 NCOA1Q15788 1441 aa30.06■■■□□ 2.4
GMDS-203ENST00000467288 PZPP20742 1482 aa30.05■■■□□ 2.4
GMDS-203ENST00000467288 ERBINQ96RT1 1412 aa30.05■■■□□ 2.4
GMDS-203ENST00000467288 MROH1Q8NDA8 1641 aa30.04■■■□□ 2.4
GMDS-203ENST00000467288 MYO3AQ8NEV4 1616 aa30.04■■■□□ 2.4
GMDS-203ENST00000467288 FAM50AQ14320 339 aaKnown RBP30.04■■■□□ 2.4
GMDS-203ENST00000467288 ANKRD30AQ9BXX3 1397 aa30.03■■■□□ 2.4
GMDS-203ENST00000467288 NCKAP5LQ9HCH0 1330 aa30.02■■■□□ 2.4
GMDS-203ENST00000467288 CHIC2Q9UKJ5 165 aa30.02■■■□□ 2.4
GMDS-203ENST00000467288 ABCC3O15438 1527 aa30.01■■■□□ 2.4
GMDS-203ENST00000467288 ZNF142P52746 1687 aaPredicted RBP30.01■■■□□ 2.39
GMDS-203ENST00000467288 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.39
GMDS-203ENST00000467288 FBXO31Q5XUX0 539 aaPredicted RBP30■■■□□ 2.39
GMDS-203ENST00000467288 ADGRL2O95490 1459 aa29.99■■■□□ 2.39
GMDS-203ENST00000467288 CEP170BQ9Y4F5 1589 aaPredicted RBP29.98■■■□□ 2.39
GMDS-203ENST00000467288 TNRQ92752 1358 aa29.97■■■□□ 2.39
GMDS-203ENST00000467288 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
GMDS-203ENST00000467288 PRDM15P57071 1507 aaPredicted RBP29.95■■■□□ 2.38
GMDS-203ENST00000467288 A2ML1A8K2U0 1454 aa29.94■■■□□ 2.38
GMDS-203ENST00000467288 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
GMDS-203ENST00000467288 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
GMDS-203ENST00000467288 PKD2Q13563 968 aa29.92■■■□□ 2.38
GMDS-203ENST00000467288 DEPDC5O75140 1603 aa29.92■■■□□ 2.38
GMDS-203ENST00000467288 CEP152O94986 1710 aa29.91■■■□□ 2.38
GMDS-203ENST00000467288 PLA2R1Q13018 1463 aa29.9■■■□□ 2.38
GMDS-203ENST00000467288 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
GMDS-203ENST00000467288 SPATA31D1Q6ZQQ2 1576 aa29.87■■■□□ 2.37
GMDS-203ENST00000467288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.86■■■□□ 2.37
GMDS-203ENST00000467288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.85■■■□□ 2.37
GMDS-203ENST00000467288 ARHGAP31Q2M1Z3 1444 aa29.85■■■□□ 2.37
GMDS-203ENST00000467288 ERVK-7P63135 1459 aa29.85■■■□□ 2.37
GMDS-203ENST00000467288 NLRP1Q9C000 1473 aa29.85■■■□□ 2.37
GMDS-203ENST00000467288 KANK1Q14678 1352 aa29.83■■■□□ 2.37
GMDS-203ENST00000467288 VWDEQ8N2E2 1590 aa29.82■■■□□ 2.36
GMDS-203ENST00000467288 ANKRD50Q9ULJ7 1429 aa29.82■■■□□ 2.36
GMDS-203ENST00000467288 IQSEC2Q5JU85 1478 aa29.8■■■□□ 2.36
GMDS-203ENST00000467288 ROCK1Q13464 1354 aa29.8■■■□□ 2.36
GMDS-203ENST00000467288 DISP3Q9P2K9 1392 aa29.8■■■□□ 2.36
GMDS-203ENST00000467288 LMTK2Q8IWU2 1503 aa29.8■■■□□ 2.36
GMDS-203ENST00000467288 UGGT1Q9NYU2 1555 aa29.75■■■□□ 2.35
GMDS-203ENST00000467288 UBAP1LF5GYI3 381 aa29.74■■■□□ 2.35
GMDS-203ENST00000467288 THEMISQ8N1K5 641 aaPredicted RBP29.74■■■□□ 2.35
GMDS-203ENST00000467288 RRBP1Q9P2E9 1410 aaKnown RBP29.73■■■□□ 2.35
GMDS-203ENST00000467288 ILDR2Q71H61 639 aa29.72■■■□□ 2.35
GMDS-203ENST00000467288 CFAP65Q6ZU64 1925 aaKnown RBP29.72■■■□□ 2.35
GMDS-203ENST00000467288 ITGAEP38570 1179 aa29.71■■■□□ 2.35
GMDS-203ENST00000467288 EFCAB6Q5THR3 1501 aa29.68■■■□□ 2.34
GMDS-203ENST00000467288 POLR1AO95602 1720 aaPredicted RBP29.66■■■□□ 2.34
GMDS-203ENST00000467288 NEURL4Q96JN8 1562 aa29.66■■■□□ 2.34
GMDS-203ENST00000467288 ANKLE2Q86XL3 938 aa29.66■■■□□ 2.34
GMDS-203ENST00000467288 UNC13BO14795 1591 aa29.65■■■□□ 2.34
GMDS-203ENST00000467288 UBR1Q8IWV7 1749 aa29.62■■■□□ 2.33
GMDS-203ENST00000467288 NOS1P29475 1434 aa29.62■■■□□ 2.33
GMDS-203ENST00000467288 MED14O60244 1454 aa29.6■■■□□ 2.33
GMDS-203ENST00000467288 RPRD2Q5VT52 1461 aaKnown RBP29.59■■■□□ 2.33
GMDS-203ENST00000467288 TET3O43151 1660 aa29.59■■■□□ 2.33
GMDS-203ENST00000467288 SYNMO15061 1565 aa29.58■■■□□ 2.33
GMDS-203ENST00000467288 PIK3C2BO00750 1634 aa29.56■■■□□ 2.32
GMDS-203ENST00000467288 NPHP4O75161 1426 aaPredicted RBP29.55■■■□□ 2.32
GMDS-203ENST00000467288 IDI1Q13907 227 aa29.55■■■□□ 2.32
GMDS-203ENST00000467288 ARHGAP23Q9P227 1491 aa29.55■■■□□ 2.32
GMDS-203ENST00000467288 SOCS7O14512 581 aa29.54■■■□□ 2.32
GMDS-203ENST00000467288 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
GMDS-203ENST00000467288 IQGAP3Q86VI3 1631 aa29.53■■■□□ 2.32
GMDS-203ENST00000467288 SLIT1O75093 1534 aa29.53■■■□□ 2.32
GMDS-203ENST00000467288 KDM5AP29375 1690 aaKnown RBP29.51■■■□□ 2.31
GMDS-203ENST00000467288 NUP155O75694 1391 aa29.51■■■□□ 2.31
GMDS-203ENST00000467288 PIP4K2BP78356 416 aa29.5■■■□□ 2.31
GMDS-203ENST00000467288 SLC52A1Q9NWF4 448 aa29.5■■■□□ 2.31
GMDS-203ENST00000467288 SCAF1Q9H7N4 1312 aaKnown RBP29.49■■■□□ 2.31
GMDS-203ENST00000467288 TOM1O60784 492 aa29.49■■■□□ 2.31
GMDS-203ENST00000467288 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
GMDS-203ENST00000467288 IQGAP1P46940 1657 aa29.48■■■□□ 2.31
GMDS-203ENST00000467288 LTKP29376 864 aa29.47■■■□□ 2.31
GMDS-203ENST00000467288 STAG3Q9UJ98 1225 aa29.47■■■□□ 2.31
GMDS-203ENST00000467288 TMEM2Q9UHN6 1383 aa29.47■■■□□ 2.31
GMDS-203ENST00000467288 NAIPQ13075 1403 aa29.46■■■□□ 2.31
GMDS-203ENST00000467288 TXNDC2Q86VQ3 553 aa29.46■■■□□ 2.31
GMDS-203ENST00000467288 E9PCH4 1651 aa29.46■■■□□ 2.31
GMDS-203ENST00000467288 CPS1P31327 1500 aa29.45■■■□□ 2.31
GMDS-203ENST00000467288 HSPA1LP34931 641 aa29.44■■■□□ 2.3
GMDS-203ENST00000467288 ADGRB3O60242 1522 aa29.44■■■□□ 2.3
GMDS-203ENST00000467288 EID1Q9Y6B2 187 aa29.42■■■□□ 2.3
GMDS-203ENST00000467288 HFM1A2PYH4 1435 aa29.38■■■□□ 2.29
GMDS-203ENST00000467288 TMEM131LA2VDJ0 1609 aa29.33■■■□□ 2.29
GMDS-203ENST00000467288 MYO5BQ9ULV0 1848 aa29.29■■■□□ 2.28
GMDS-203ENST00000467288 STRCP1A6NGW2 1772 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms