RNA–Protein interactions for RNA: ENST00000467259.1

GABBR1-207, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 2

Gene GABBR1, Length 1,252 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-207ENST00000467259 ZNF142P52746 1687 aaPredicted RBP37.39■■■■□ 3.58
GABBR1-207ENST00000467259 TCOF1Q13428 1488 aaKnown RBP37.39■■■■□ 3.58
GABBR1-207ENST00000467259 ABCC5O15440 1437 aa37.38■■■■□ 3.57
GABBR1-207ENST00000467259 EIF2AK4Q9P2K8 1649 aaKnown RBP37.38■■■■□ 3.57
GABBR1-207ENST00000467259 SHANK2Q9UPX8 1470 aa37.36■■■■□ 3.57
GABBR1-207ENST00000467259 FAM135AQ9P2D6 1515 aa37.35■■■■□ 3.57
GABBR1-207ENST00000467259 DAPK1P53355 1430 aa37.34■■■■□ 3.57
GABBR1-207ENST00000467259 CEP170BQ9Y4F5 1589 aaPredicted RBP37.32■■■■□ 3.56
GABBR1-207ENST00000467259 CAMSAP1Q5T5Y3 1602 aa37.31■■■■□ 3.56
GABBR1-207ENST00000467259 MROH1Q8NDA8 1641 aa37.31■■■■□ 3.56
GABBR1-207ENST00000467259 DUOX2Q9NRD8 1548 aa37.31■■■■□ 3.56
GABBR1-207ENST00000467259 WASHC2CQ9Y4E1 1318 aa37.29■■■■□ 3.56
GABBR1-207ENST00000467259 NCOA1Q15788 1441 aa37.27■■■■□ 3.56
GABBR1-207ENST00000467259 CEP152O94986 1710 aa37.27■■■■□ 3.56
GABBR1-207ENST00000467259 PZPP20742 1482 aa37.27■■■■□ 3.56
GABBR1-207ENST00000467259 KIF15Q9NS87 1388 aa37.27■■■■□ 3.56
GABBR1-207ENST00000467259 ZC3H13Q5T200 1668 aaKnown RBP37.26■■■■□ 3.56
GABBR1-207ENST00000467259 ABCC3O15438 1527 aa37.26■■■■□ 3.55
GABBR1-207ENST00000467259 FBXO31Q5XUX0 539 aaPredicted RBP37.24■■■■□ 3.55
GABBR1-207ENST00000467259 RRP7BPQ9NSQ0 103 aa37.21■■■■□ 3.55
GABBR1-207ENST00000467259 CHIC2Q9UKJ5 165 aa37.18■■■■□ 3.54
GABBR1-207ENST00000467259 DMRT2Q9Y5R5 561 aa37.18■■■■□ 3.54
GABBR1-207ENST00000467259 CFAP65Q6ZU64 1925 aaKnown RBP37.18■■■■□ 3.54
GABBR1-207ENST00000467259 TNRQ92752 1358 aa37.17■■■■□ 3.54
GABBR1-207ENST00000467259 A2ML1A8K2U0 1454 aa37.17■■■■□ 3.54
GABBR1-207ENST00000467259 PTPRTO14522 1441 aa37.16■■■■□ 3.54
GABBR1-207ENST00000467259 ERBINQ96RT1 1412 aa37.16■■■■□ 3.54
GABBR1-207ENST00000467259 FAM50AQ14320 339 aaKnown RBP37.15■■■■□ 3.54
GABBR1-207ENST00000467259 FBXO41Q8TF61 875 aa37.14■■■■□ 3.54
GABBR1-207ENST00000467259 PRDM15P57071 1507 aaPredicted RBP37.14■■■■□ 3.54
GABBR1-207ENST00000467259 DEPDC5O75140 1603 aa37.12■■■■□ 3.53
GABBR1-207ENST00000467259 NCKAP5LQ9HCH0 1330 aa37.11■■■■□ 3.53
GABBR1-207ENST00000467259 PLA2R1Q13018 1463 aa37.1■■■■□ 3.53
GABBR1-207ENST00000467259 ANKRD30AQ9BXX3 1397 aa37.09■■■■□ 3.53
GABBR1-207ENST00000467259 PPARGC1BQ86YN6 1023 aaKnown RBP37.08■■■■□ 3.53
GABBR1-207ENST00000467259 CERKQ8TCT0 537 aa37.07■■■■□ 3.52
GABBR1-207ENST00000467259 ADGRL2O95490 1459 aa37.06■■■■□ 3.52
GABBR1-207ENST00000467259 SPATA31D1Q6ZQQ2 1576 aa37.05■■■■□ 3.52
GABBR1-207ENST00000467259 POLR1AO95602 1720 aaPredicted RBP37.05■■■■□ 3.52
GABBR1-207ENST00000467259 ERVK-7P63135 1459 aa37.03■■■■□ 3.52
GABBR1-207ENST00000467259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.01■■■■□ 3.52
GABBR1-207ENST00000467259 NLRP1Q9C000 1473 aa37.01■■■■□ 3.51
GABBR1-207ENST00000467259 LTBP4Q8N2S1 1624 aa36.97■■■■□ 3.51
GABBR1-207ENST00000467259 UGGT1Q9NYU2 1555 aa36.96■■■■□ 3.51
GABBR1-207ENST00000467259 PKD2Q13563 968 aa36.96■■■■□ 3.51
GABBR1-207ENST00000467259 NEURL4Q96JN8 1562 aa36.94■■■■□ 3.5
GABBR1-207ENST00000467259 VWDEQ8N2E2 1590 aa36.92■■■■□ 3.5
GABBR1-207ENST00000467259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.91■■■■□ 3.52e-7■■■■■ 35
GABBR1-207ENST00000467259 KANK1Q14678 1352 aa36.9■■■■□ 3.5
GABBR1-207ENST00000467259 ARHGAP31Q2M1Z3 1444 aa36.89■■■■□ 3.5
GABBR1-207ENST00000467259 UBR1Q8IWV7 1749 aa36.88■■■■□ 3.49
GABBR1-207ENST00000467259 ANKRD50Q9ULJ7 1429 aa36.86■■■■□ 3.49
GABBR1-207ENST00000467259 LMTK2Q8IWU2 1503 aa36.86■■■■□ 3.49
GABBR1-207ENST00000467259 ZNF335Q9H4Z2 1342 aaPredicted RBP36.85■■■■□ 3.49
GABBR1-207ENST00000467259 THEMISQ8N1K5 641 aaPredicted RBP36.82■■■■□ 3.48
GABBR1-207ENST00000467259 EFCAB6Q5THR3 1501 aa36.81■■■■□ 3.48
GABBR1-207ENST00000467259 PIK3C2BO00750 1634 aa36.78■■■■□ 3.48
GABBR1-207ENST00000467259 ITGAEP38570 1179 aa36.78■■■■□ 3.48
GABBR1-207ENST00000467259 UNC13BO14795 1591 aa36.76■■■■□ 3.48
GABBR1-207ENST00000467259 ANKLE2Q86XL3 938 aa36.75■■■■□ 3.47
GABBR1-207ENST00000467259 SYNMO15061 1565 aa36.74■■■■□ 3.47
GABBR1-207ENST00000467259 IQGAP1P46940 1657 aa36.74■■■■□ 3.47
GABBR1-207ENST00000467259 ROCK1Q13464 1354 aa36.73■■■■□ 3.47
GABBR1-207ENST00000467259 TET3O43151 1660 aa36.71■■■■□ 3.47
GABBR1-207ENST00000467259 NPHP4O75161 1426 aaPredicted RBP36.7■■■■□ 3.47
GABBR1-207ENST00000467259 MED14O60244 1454 aa36.69■■■■□ 3.46
GABBR1-207ENST00000467259 GCC2Q8IWJ2 1684 aa36.69■■■■□ 3.46
GABBR1-207ENST00000467259 IQSEC2Q5JU85 1478 aa36.68■■■■□ 3.46
GABBR1-207ENST00000467259 NOS1P29475 1434 aa36.64■■■■□ 3.46
GABBR1-207ENST00000467259 RRBP1Q9P2E9 1410 aaKnown RBP36.62■■■■□ 3.45
GABBR1-207ENST00000467259 SLIT1O75093 1534 aa36.62■■■■□ 3.45
GABBR1-207ENST00000467259 ARHGAP23Q9P227 1491 aa36.62■■■■□ 3.45
GABBR1-207ENST00000467259 IQGAP3Q86VI3 1631 aa36.61■■■■□ 3.45
GABBR1-207ENST00000467259 KDM5AP29375 1690 aaKnown RBP36.61■■■■□ 3.45
GABBR1-207ENST00000467259 SCAF11Q99590 1463 aaKnown RBP36.6■■■■□ 3.45
GABBR1-207ENST00000467259 E9PCH4 1651 aa36.6■■■■□ 3.45
GABBR1-207ENST00000467259 RPRD2Q5VT52 1461 aaKnown RBP36.58■■■■□ 3.45
GABBR1-207ENST00000467259 MYO5BQ9ULV0 1848 aa36.57■■■■□ 3.45
GABBR1-207ENST00000467259 IDI1Q13907 227 aa36.57■■■■□ 3.44
GABBR1-207ENST00000467259 STRCP1A6NGW2 1772 aa36.57■■■■□ 3.44
GABBR1-207ENST00000467259 ADGRB3O60242 1522 aa36.55■■■■□ 3.44
GABBR1-207ENST00000467259 LTKP29376 864 aa36.55■■■■□ 3.44
GABBR1-207ENST00000467259 STAG3Q9UJ98 1225 aa36.54■■■■□ 3.44
GABBR1-207ENST00000467259 CPS1P31327 1500 aa36.54■■■■□ 3.44
GABBR1-207ENST00000467259 TMEM2Q9UHN6 1383 aa36.51■■■■□ 3.43
GABBR1-207ENST00000467259 TXNDC2Q86VQ3 553 aa36.5■■■■□ 3.43
GABBR1-207ENST00000467259 NUP155O75694 1391 aa36.47■■■■□ 3.43
GABBR1-207ENST00000467259 UBAP1LF5GYI3 381 aa36.44■■■■□ 3.42
GABBR1-207ENST00000467259 EID1Q9Y6B2 187 aa36.44■■■■□ 3.42
GABBR1-207ENST00000467259 SLC52A1Q9NWF4 448 aa36.43■■■■□ 3.42
GABBR1-207ENST00000467259 TMEM131LA2VDJ0 1609 aa36.41■■■■□ 3.42
GABBR1-207ENST00000467259 NAIPQ13075 1403 aa36.37■■■■□ 3.41
GABBR1-207ENST00000467259 SPHKAPQ2M3C7 1700 aa36.34■■■■□ 3.41
GABBR1-207ENST00000467259 LRRC7Q96NW7 1537 aa36.34■■■■□ 3.41
GABBR1-207ENST00000467259 XIRP1Q702N8 1843 aaKnown RBP36.3■■■■□ 3.4
GABBR1-207ENST00000467259 ZFYVE9O95405 1425 aa36.3■■■■□ 3.4
GABBR1-207ENST00000467259 SENP3Q9H4L4 574 aaPredicted RBP36.29■■■■□ 3.4
GABBR1-207ENST00000467259 CHGAP10645 457 aaKnown RBP36.27■■■■□ 3.4
GABBR1-207ENST00000467259 ALKQ9UM73 1620 aa36.26■■■■□ 3.4
GABBR1-207ENST00000467259 RIMS2Q9UQ26 1411 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms