RNA–Protein interactions for RNA: ENST00000467259.1

GABBR1-207, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 2

Gene GABBR1, Length 1,252 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-207ENST00000467259 NISCHQ9Y2I1 1504 aa59.3■■■■■ 7.08
GABBR1-207ENST00000467259 CCDC180Q9P1Z9 1646 aa53.03■■■■■ 6.08
GABBR1-207ENST00000467259 ABCC9O60706 1549 aa52.46■■■■■ 5.99
GABBR1-207ENST00000467259 RB1CC1Q8TDY2 1594 aa50.14■■■■■ 5.62
GABBR1-207ENST00000467259 NACADO15069 1562 aa49.91■■■■■ 5.58
GABBR1-207ENST00000467259 DCAF8L2P0C7V8 631 aa49.78■■■■■ 5.56
GABBR1-207ENST00000467259 MYO15BQ96JP2 1530 aa49.34■■■■■ 5.49
GABBR1-207ENST00000467259 ZCCHC6Q5VYS8 1495 aaKnown RBP49.3■■■■■ 5.48
GABBR1-207ENST00000467259 UNC13AQ9UPW8 1703 aa49.23■■■■■ 5.47
GABBR1-207ENST00000467259 DCAF1Q9Y4B6 1507 aa48.97■■■■■ 5.43
GABBR1-207ENST00000467259 PABPN1Q86U42 306 aaKnown RBP eCLIP48.89■■■■■ 5.42
GABBR1-207ENST00000467259 BICRAQ9NZM4 1560 aa48.73■■■■■ 5.39
GABBR1-207ENST00000467259 DNAJC5BQ9UF47 199 aa48.63■■■■■ 5.38
GABBR1-207ENST00000467259 SCRIBQ14160 1630 aa48.43■■■■■ 5.34
GABBR1-207ENST00000467259 SHROOM4Q9ULL8 1493 aa47.97■■■■■ 5.27
GABBR1-207ENST00000467259 EIF4G1Q04637 1599 aaKnown RBP47.46■■■■■ 5.19
GABBR1-207ENST00000467259 CC2D2AQ9P2K1 1620 aa47.44■■■■■ 5.18
GABBR1-207ENST00000467259 CECR2Q9BXF3 1484 aa47.14■■■■■ 5.14
GABBR1-207ENST00000467259 SMARCA4P51532 1647 aa46.21■■■■■ 4.99
GABBR1-207ENST00000467259 NCAPD3P42695 1498 aa46.02■■■■■ 4.96
GABBR1-207ENST00000467259 ATAD2BQ9ULI0 1458 aa46.02■■■■■ 4.96
GABBR1-207ENST00000467259 BAZ1AQ9NRL2 1556 aaPredicted RBP45.99■■■■■ 4.95
GABBR1-207ENST00000467259 SMARCA2P51531 1590 aa45.92■■■■■ 4.94
GABBR1-207ENST00000467259 HMGXB3Q12766 1538 aa45.81■■■■■ 4.92
GABBR1-207ENST00000467259 MROH2BQ7Z745 1585 aa45.75■■■■■ 4.92
GABBR1-207ENST00000467259 PEG3Q9GZU2 1588 aa45.68■■■■■ 4.9
GABBR1-207ENST00000467259 BAZ1BQ9UIG0 1483 aaKnown RBP45.63■■■■■ 4.9
GABBR1-207ENST00000467259 WIZO95785 1651 aa45.31■■■■■ 4.84
GABBR1-207ENST00000467259 NESP48681 1621 aa45.26■■■■■ 4.84
GABBR1-207ENST00000467259 ERCC6Q03468 1493 aa45.22■■■■■ 4.83
GABBR1-207ENST00000467259 LAMC3Q9Y6N6 1575 aa44.96■■■■■ 4.79
GABBR1-207ENST00000467259 RSF1Q96T23 1441 aaPredicted RBP44.96■■■■■ 4.79
GABBR1-207ENST00000467259 CUX2O14529 1486 aa44.88■■■■■ 4.78
GABBR1-207ENST00000467259 KIF21AQ7Z4S6 1674 aa44.79■■■■■ 4.76
GABBR1-207ENST00000467259 THOC2Q8NI27 1593 aaKnown RBP44.71■■■■■ 4.75
GABBR1-207ENST00000467259 TOP2AP11388 1531 aaKnown RBP44.7■■■■■ 4.75
GABBR1-207ENST00000467259 CADPSQ9ULU8 1353 aa44.66■■■■■ 4.74
GABBR1-207ENST00000467259 PDS5BQ9NTI5 1447 aa44.61■■■■■ 4.73
GABBR1-207ENST00000467259 CFTRP13569 1480 aa44.3■■■■■ 4.68
GABBR1-207ENST00000467259 MRC2Q9UBG0 1479 aa44.27■■■■■ 4.68
GABBR1-207ENST00000467259 FANCD2Q9BXW9 1451 aa44.21■■■■■ 4.67
GABBR1-207ENST00000467259 CEP164Q9UPV0 1460 aa44.21■■■■■ 4.67
GABBR1-207ENST00000467259 WDR62O43379 1518 aa44.17■■■■■ 4.66
GABBR1-207ENST00000467259 CCDC88BA6NC98 1476 aa44.15■■■■■ 4.66
GABBR1-207ENST00000467259 DNAJC5Q9H3Z4 198 aa44.13■■■■■ 4.66
GABBR1-207ENST00000467259 PRDM2Q13029 1718 aa44.11■■■■■ 4.65
GABBR1-207ENST00000467259 URB2Q14146 1524 aaKnown RBP43.86■■■■■ 4.61
GABBR1-207ENST00000467259 TOPBP1Q92547 1522 aa43.46■■■■■ 4.55
GABBR1-207ENST00000467259 SUPT5HO00267 1087 aaKnown RBP43.42■■■■■ 4.54
GABBR1-207ENST00000467259 DNMBPQ6XZF7 1577 aa43.37■■■■■ 4.53
GABBR1-207ENST00000467259 ABCC8Q09428 1581 aa43.29■■■■■ 4.52
GABBR1-207ENST00000467259 IFT140Q96RY7 1462 aa43.27■■■■■ 4.52
GABBR1-207ENST00000467259 ZNF608Q9ULD9 1512 aaPredicted RBP43.23■■■■■ 4.51
GABBR1-207ENST00000467259 TARBP1Q13395 1621 aaKnown RBP43.08■■■■■ 4.49
GABBR1-207ENST00000467259 EIF4G3O43432 1585 aaKnown RBP43.07■■■■■ 4.49
GABBR1-207ENST00000467259 POLA1P09884 1462 aaPredicted RBP43.06■■■■■ 4.48
GABBR1-207ENST00000467259 CUX1P39880 1505 aa42.97■■■■■ 4.47
GABBR1-207ENST00000467259 RAD54L2Q9Y4B4 1467 aa42.92■■■■■ 4.46
GABBR1-207ENST00000467259 FGD5Q6ZNL6 1462 aa42.89■■■■■ 4.46
GABBR1-207ENST00000467259 AQRO60306 1485 aaKnown RBP eCLIP42.87■■■■■ 4.45
GABBR1-207ENST00000467259 OSCARQ8IYS5 282 aa42.86■■■■■ 4.45
GABBR1-207ENST00000467259 SOGA1O94964 1423 aa42.8■■■■■ 4.44
GABBR1-207ENST00000467259 CHD1O14646 1710 aa42.71■■■■■ 4.43
GABBR1-207ENST00000467259 TDRD9Q8NDG6 1382 aaKnown RBP42.68■■■■■ 4.42
GABBR1-207ENST00000467259 WDR97A6NE52 1622 aa42.65■■■■■ 4.42
GABBR1-207ENST00000467259 TRIM41Q8WV44 630 aa42.55■■■■■ 4.4
GABBR1-207ENST00000467259 SNAPC4Q5SXM2 1469 aa42.49■■■■■ 4.39
GABBR1-207ENST00000467259 SYNJ1O43426 1573 aa42.46■■■■■ 4.39
GABBR1-207ENST00000467259 BIVM-ERCC5R4GMW8 1640 aa42.46■■■■■ 4.39
GABBR1-207ENST00000467259 PBRM1Q86U86 1689 aa42.44■■■■■ 4.39
GABBR1-207ENST00000467259 FBLN2P98095 1184 aa42.44■■■■■ 4.38
GABBR1-207ENST00000467259 RIMBP3CA6NJZ7 1639 aa42.44■■■■■ 4.38
GABBR1-207ENST00000467259 RIMBP3BA6NNM3 1639 aa42.44■■■■■ 4.38
GABBR1-207ENST00000467259 RIMBP3Q9UFD9 1639 aa42.44■■■■■ 4.38
GABBR1-207ENST00000467259 TOP2BQ02880 1626 aa42.42■■■■■ 4.38
GABBR1-207ENST00000467259 WRNQ14191 1432 aaPredicted RBP eCLIP42.4■■■■■ 4.38
GABBR1-207ENST00000467259 ABCA10Q8WWZ4 1543 aa42.39■■■■■ 4.38
GABBR1-207ENST00000467259 GRIN2BQ13224 1484 aa42.38■■■■■ 4.38
GABBR1-207ENST00000467259 ABCA5Q8WWZ7 1642 aa42.36■■■■■ 4.37
GABBR1-207ENST00000467259 GAPVD1Q14C86 1478 aa42.34■■■■■ 4.37
GABBR1-207ENST00000467259 MAGI1Q96QZ7 1491 aaPredicted RBP42.33■■■■■ 4.37
GABBR1-207ENST00000467259 ARHGEF11O15085 1522 aa42.31■■■■■ 4.36
GABBR1-207ENST00000467259 SYNJ2O15056 1496 aa42.19■■■■■ 4.34
GABBR1-207ENST00000467259 CHMP7Q8WUX9 453 aaPredicted RBP42.17■■■■■ 4.34
GABBR1-207ENST00000467259 CLASP1Q7Z460 1538 aa42.11■■■■■ 4.33
GABBR1-207ENST00000467259 ADAMTS12P58397 1594 aa42.01■■■■■ 4.32
GABBR1-207ENST00000467259 ARAP1Q96P48 1450 aa41.94■■■■■ 4.3
GABBR1-207ENST00000467259 GRIN2AQ12879 1464 aa41.88■■■■■ 4.29
GABBR1-207ENST00000467259 CYB5RLQ6IPT4 315 aa41.88■■■■■ 4.29
GABBR1-207ENST00000467259 ERICH3Q5RHP9 1530 aa41.86■■■■■ 4.29
GABBR1-207ENST00000467259 FHAD1B1AJZ9 1412 aa41.78■■■■■ 4.28
GABBR1-207ENST00000467259 CEP170Q5SW79 1584 aa41.77■■■■■ 4.28
GABBR1-207ENST00000467259 NUP160Q12769 1436 aa41.69■■■■■ 4.26
GABBR1-207ENST00000467259 ERCC6L2Q5T890 1561 aa41.57■■■■■ 4.25
GABBR1-207ENST00000467259 KIF27Q86VH2 1401 aa41.52■■■■■ 4.24
GABBR1-207ENST00000467259 SHROOM2Q13796 1616 aa41.51■■■■■ 4.24
GABBR1-207ENST00000467259 CUL7Q14999 1698 aa41.44■■■■■ 4.22
GABBR1-207ENST00000467259 IGF1RP08069 1367 aa41.42■■■■■ 4.22
GABBR1-207ENST00000467259 RUSC2Q8N2Y8 1516 aa41.41■■■■■ 4.22
GABBR1-207ENST00000467259 PRG4Q92954 1404 aaPredicted RBP41.25■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms