RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
RPUSD3-212ENST00000466141 HNRNPMP52272 730 aaKnown RBP eCLIP11.37□□□□□ -0.59
RPUSD3-212ENST00000466141 GGT6Q6P531 493 aa11.37□□□□□ -0.59
RPUSD3-212ENST00000466141 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
RPUSD3-212ENST00000466141 SENP3Q9H4L4 574 aaPredicted RBP11.36□□□□□ -0.59
RPUSD3-212ENST00000466141 A2MP01023 1474 aa11.36□□□□□ -0.59
RPUSD3-212ENST00000466141 NEURL4Q96JN8 1562 aa11.36□□□□□ -0.59
RPUSD3-212ENST00000466141 INO80Q9ULG1 1556 aaPredicted RBP11.36□□□□□ -0.59
RPUSD3-212ENST00000466141 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
RPUSD3-212ENST00000466141 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
RPUSD3-212ENST00000466141 A2ML1A8K2U0 1454 aa11.34□□□□□ -0.59
RPUSD3-212ENST00000466141 CCDC18Q5T9S5 1454 aa11.34□□□□□ -0.59
RPUSD3-212ENST00000466141 TULP1O00294 542 aaPredicted RBP11.34□□□□□ -0.59
RPUSD3-212ENST00000466141 TOM1O60784 492 aa11.34□□□□□ -0.59
RPUSD3-212ENST00000466141 SHANK2Q9UPX8 1470 aa11.33□□□□□ -0.6
RPUSD3-212ENST00000466141 POLR1AO95602 1720 aaPredicted RBP11.33□□□□□ -0.6
RPUSD3-212ENST00000466141 CPS1P31327 1500 aa11.33□□□□□ -0.6
RPUSD3-212ENST00000466141 GPATCH8Q9UKJ3 1502 aaKnown RBP11.33□□□□□ -0.6
RPUSD3-212ENST00000466141 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
RPUSD3-212ENST00000466141 VWDEQ8N2E2 1590 aa11.31□□□□□ -0.6
RPUSD3-212ENST00000466141 TNRQ92752 1358 aa11.28□□□□□ -0.6
RPUSD3-212ENST00000466141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPUSD3-212ENST00000466141 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
RPUSD3-212ENST00000466141 ADGBQ8N7X0 1667 aa11.28□□□□□ -0.6
RPUSD3-212ENST00000466141 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
RPUSD3-212ENST00000466141 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
RPUSD3-212ENST00000466141 ZNF644Q9H582 1327 aaPredicted RBP11.27□□□□□ -0.61
RPUSD3-212ENST00000466141 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
RPUSD3-212ENST00000466141 PLEKHH2Q8IVE3 1493 aa11.26□□□□□ -0.61
RPUSD3-212ENST00000466141 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
RPUSD3-212ENST00000466141 STRCP1A6NGW2 1772 aa11.26□□□□□ -0.61
RPUSD3-212ENST00000466141 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
RPUSD3-212ENST00000466141 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
RPUSD3-212ENST00000466141 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
RPUSD3-212ENST00000466141 BCL11AQ9H165 835 aa11.25□□□□□ -0.61
RPUSD3-212ENST00000466141 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
RPUSD3-212ENST00000466141 PZPP20742 1482 aa11.25□□□□□ -0.61
RPUSD3-212ENST00000466141 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
RPUSD3-212ENST00000466141 TIAM1Q13009 1591 aa11.24□□□□□ -0.61
RPUSD3-212ENST00000466141 LRRC7Q96NW7 1537 aa11.24□□□□□ -0.61
RPUSD3-212ENST00000466141 KIF3BO15066 747 aa11.23□□□□□ -0.61
RPUSD3-212ENST00000466141 MBD5Q9P267 1494 aa11.23□□□□□ -0.61
RPUSD3-212ENST00000466141 KDM5DQ9BY66 1539 aa11.23□□□□□ -0.61
RPUSD3-212ENST00000466141 UGGT1Q9NYU2 1555 aa11.23□□□□□ -0.61
RPUSD3-212ENST00000466141 IQGAP1P46940 1657 aa11.23□□□□□ -0.61
RPUSD3-212ENST00000466141 MED14O60244 1454 aa11.22□□□□□ -0.61
RPUSD3-212ENST00000466141 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
RPUSD3-212ENST00000466141 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
RPUSD3-212ENST00000466141 DEPDC5O75140 1603 aa11.21□□□□□ -0.61
RPUSD3-212ENST00000466141 MIA2Q96PC5 1412 aa11.21□□□□□ -0.61
RPUSD3-212ENST00000466141 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
RPUSD3-212ENST00000466141 WASHC2CQ9Y4E1 1318 aa11.2□□□□□ -0.62
RPUSD3-212ENST00000466141 THEMISQ8N1K5 641 aaPredicted RBP11.2□□□□□ -0.62
RPUSD3-212ENST00000466141 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
RPUSD3-212ENST00000466141 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
RPUSD3-212ENST00000466141 SYNMO15061 1565 aa11.19□□□□□ -0.62
RPUSD3-212ENST00000466141 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
RPUSD3-212ENST00000466141 MTUS2Q5JR59 1369 aa11.18□□□□□ -0.62
RPUSD3-212ENST00000466141 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
RPUSD3-212ENST00000466141 POTEAQ6S8J7 498 aa11.18□□□□□ -0.62
RPUSD3-212ENST00000466141 ZC3H13Q5T200 1668 aaKnown RBP11.17□□□□□ -0.62
RPUSD3-212ENST00000466141 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.62
RPUSD3-212ENST00000466141 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.63
RPUSD3-212ENST00000466141 XIRP1Q702N8 1843 aaKnown RBP11.14□□□□□ -0.63
RPUSD3-212ENST00000466141 LRRC9Q6ZRR7 1453 aa11.14□□□□□ -0.63
RPUSD3-212ENST00000466141 ABCC3O15438 1527 aa11.14□□□□□ -0.63
RPUSD3-212ENST00000466141 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
RPUSD3-212ENST00000466141 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
RPUSD3-212ENST00000466141 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
RPUSD3-212ENST00000466141 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
RPUSD3-212ENST00000466141 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
RPUSD3-212ENST00000466141 LTKP29376 864 aa11.11□□□□□ -0.63
RPUSD3-212ENST00000466141 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
RPUSD3-212ENST00000466141 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
RPUSD3-212ENST00000466141 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
RPUSD3-212ENST00000466141 FAM135BQ49AJ0 1406 aa11.09□□□□□ -0.63
RPUSD3-212ENST00000466141 ROBO1Q9Y6N7 1651 aa11.08□□□□□ -0.64
RPUSD3-212ENST00000466141 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
RPUSD3-212ENST00000466141 CFAP65Q6ZU64 1925 aaKnown RBP11.08□□□□□ -0.64
RPUSD3-212ENST00000466141 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
RPUSD3-212ENST00000466141 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
RPUSD3-212ENST00000466141 CEP152O94986 1710 aa11.08□□□□□ -0.64
RPUSD3-212ENST00000466141 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
RPUSD3-212ENST00000466141 TMEM94Q12767 1356 aa11.06□□□□□ -0.64
RPUSD3-212ENST00000466141 SLIT1O75093 1534 aa11.06□□□□□ -0.64
RPUSD3-212ENST00000466141 TSPY4P0CV99 314 aa11.04□□□□□ -0.64
RPUSD3-212ENST00000466141 TSPY10P0CW01 314 aa11.04□□□□□ -0.64
RPUSD3-212ENST00000466141 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
RPUSD3-212ENST00000466141 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
RPUSD3-212ENST00000466141 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
RPUSD3-212ENST00000466141 PIK3C2BO00750 1634 aa11.03□□□□□ -0.64
RPUSD3-212ENST00000466141 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
RPUSD3-212ENST00000466141 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.64
RPUSD3-212ENST00000466141 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
RPUSD3-212ENST00000466141 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
RPUSD3-212ENST00000466141 EID1Q9Y6B2 187 aa11.02□□□□□ -0.65
RPUSD3-212ENST00000466141 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.65
RPUSD3-212ENST00000466141 TMEM2Q9UHN6 1383 aa11.02□□□□□ -0.65
RPUSD3-212ENST00000466141 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
RPUSD3-212ENST00000466141 PTPN23Q9H3S7 1636 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms