RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
MRPL55-225ENST00000465268 ABCC5O15440 1437 aa23.37■■□□□ 1.33
MRPL55-225ENST00000465268 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
MRPL55-225ENST00000465268 KDM5DQ9BY66 1539 aa23.34■■□□□ 1.33
MRPL55-225ENST00000465268 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.33
MRPL55-225ENST00000465268 FGD6Q6ZV73 1430 aa23.32■■□□□ 1.32
MRPL55-225ENST00000465268 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
MRPL55-225ENST00000465268 PZPP20742 1482 aa23.31■■□□□ 1.32
MRPL55-225ENST00000465268 TNRQ92752 1358 aa23.31■■□□□ 1.32
MRPL55-225ENST00000465268 RRP7BPQ9NSQ0 103 aa23.31■■□□□ 1.32
MRPL55-225ENST00000465268 PTPN23Q9H3S7 1636 aa23.3■■□□□ 1.32
MRPL55-225ENST00000465268 TCOF1Q13428 1488 aaKnown RBP23.29■■□□□ 1.32
MRPL55-225ENST00000465268 DAPK1P53355 1430 aa23.28■■□□□ 1.32
MRPL55-225ENST00000465268 A2ML1A8K2U0 1454 aa23.28■■□□□ 1.32
MRPL55-225ENST00000465268 KIF15Q9NS87 1388 aa23.27■■□□□ 1.32
MRPL55-225ENST00000465268 ZNF142P52746 1687 aaPredicted RBP23.27■■□□□ 1.32
MRPL55-225ENST00000465268 FAM135AQ9P2D6 1515 aa23.27■■□□□ 1.32
MRPL55-225ENST00000465268 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
MRPL55-225ENST00000465268 CHIC2Q9UKJ5 165 aa23.26■■□□□ 1.31
MRPL55-225ENST00000465268 ABCC3O15438 1527 aa23.26■■□□□ 1.31
MRPL55-225ENST00000465268 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
MRPL55-225ENST00000465268 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
MRPL55-225ENST00000465268 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
MRPL55-225ENST00000465268 LTBP4Q8N2S1 1624 aa23.25■■□□□ 1.31
MRPL55-225ENST00000465268 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
MRPL55-225ENST00000465268 PKD2Q13563 968 aa23.24■■□□□ 1.31
MRPL55-225ENST00000465268 DNMT1P26358 1616 aaKnown RBP23.23■■□□□ 1.31
MRPL55-225ENST00000465268 ZNF335Q9H4Z2 1342 aaPredicted RBP23.23■■□□□ 1.31
MRPL55-225ENST00000465268 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
MRPL55-225ENST00000465268 ERBINQ96RT1 1412 aa23.18■■□□□ 1.3
MRPL55-225ENST00000465268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.18■■□□□ 1.3
MRPL55-225ENST00000465268 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
MRPL55-225ENST00000465268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.3
MRPL55-225ENST00000465268 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
MRPL55-225ENST00000465268 ERVK-7P63135 1459 aa23.16■■□□□ 1.3
MRPL55-225ENST00000465268 NLRP1Q9C000 1473 aa23.15■■□□□ 1.3
MRPL55-225ENST00000465268 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
MRPL55-225ENST00000465268 SPATA31D1Q6ZQQ2 1576 aa23.14■■□□□ 1.3
MRPL55-225ENST00000465268 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
MRPL55-225ENST00000465268 THEMISQ8N1K5 641 aaPredicted RBP23.13■■□□□ 1.29
MRPL55-225ENST00000465268 PRDM15P57071 1507 aaPredicted RBP23.12■■□□□ 1.29
MRPL55-225ENST00000465268 NEURL4Q96JN8 1562 aa23.11■■□□□ 1.29
MRPL55-225ENST00000465268 UGGT1Q9NYU2 1555 aa23.11■■□□□ 1.29
MRPL55-225ENST00000465268 ZC3H13Q5T200 1668 aaKnown RBP23.11■■□□□ 1.29
MRPL55-225ENST00000465268 ANKLE2Q86XL3 938 aa23.1■■□□□ 1.29
MRPL55-225ENST00000465268 CEP152O94986 1710 aa23.1■■□□□ 1.29
MRPL55-225ENST00000465268 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
MRPL55-225ENST00000465268 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
MRPL55-225ENST00000465268 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
MRPL55-225ENST00000465268 NPHP4O75161 1426 aaPredicted RBP23.03■■□□□ 1.28
MRPL55-225ENST00000465268 IQSEC2Q5JU85 1478 aa23.03■■□□□ 1.28
MRPL55-225ENST00000465268 KANK1Q14678 1352 aa23.02■■□□□ 1.28
MRPL55-225ENST00000465268 VWDEQ8N2E2 1590 aa23.02■■□□□ 1.28
MRPL55-225ENST00000465268 MED14O60244 1454 aa23.02■■□□□ 1.28
MRPL55-225ENST00000465268 LMTK2Q8IWU2 1503 aa23.01■■□□□ 1.27
MRPL55-225ENST00000465268 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
MRPL55-225ENST00000465268 LTKP29376 864 aa23■■□□□ 1.27
MRPL55-225ENST00000465268 POLR1AO95602 1720 aaPredicted RBP22.98■■□□□ 1.27
MRPL55-225ENST00000465268 UBAP1LF5GYI3 381 aa22.97■■□□□ 1.27
MRPL55-225ENST00000465268 IDI1Q13907 227 aa22.97■■□□□ 1.27
MRPL55-225ENST00000465268 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
MRPL55-225ENST00000465268 ARHGAP23Q9P227 1491 aa22.94■■□□□ 1.26
MRPL55-225ENST00000465268 ITGAEP38570 1179 aa22.94■■□□□ 1.26
MRPL55-225ENST00000465268 TXNDC2Q86VQ3 553 aa22.94■■□□□ 1.26
MRPL55-225ENST00000465268 UBR1Q8IWV7 1749 aa22.94■■□□□ 1.26
MRPL55-225ENST00000465268 NOS1P29475 1434 aa22.93■■□□□ 1.26
MRPL55-225ENST00000465268 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
MRPL55-225ENST00000465268 SYNMO15061 1565 aa22.91■■□□□ 1.26
MRPL55-225ENST00000465268 SLIT1O75093 1534 aa22.91■■□□□ 1.26
MRPL55-225ENST00000465268 SCAF11Q99590 1463 aaKnown RBP22.91■■□□□ 1.26
MRPL55-225ENST00000465268 ROCK1Q13464 1354 aa22.9■■□□□ 1.26
MRPL55-225ENST00000465268 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
MRPL55-225ENST00000465268 TMEM2Q9UHN6 1383 aa22.89■■□□□ 1.26
MRPL55-225ENST00000465268 CPS1P31327 1500 aa22.89■■□□□ 1.26
MRPL55-225ENST00000465268 IQGAP1P46940 1657 aa22.89■■□□□ 1.25
MRPL55-225ENST00000465268 STAG3Q9UJ98 1225 aa22.88■■□□□ 1.25
MRPL55-225ENST00000465268 EID1Q9Y6B2 187 aa22.84■■□□□ 1.25
MRPL55-225ENST00000465268 PIP4K2BP78356 416 aa22.83■■□□□ 1.25
MRPL55-225ENST00000465268 SLC52A1Q9NWF4 448 aa22.83■■□□□ 1.25
MRPL55-225ENST00000465268 STRCP1A6NGW2 1772 aa22.82■■□□□ 1.24
MRPL55-225ENST00000465268 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
MRPL55-225ENST00000465268 UNC13BO14795 1591 aa22.81■■□□□ 1.24
MRPL55-225ENST00000465268 RPRD2Q5VT52 1461 aaKnown RBP22.8■■□□□ 1.24
MRPL55-225ENST00000465268 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
MRPL55-225ENST00000465268 TOM1O60784 492 aa22.79■■□□□ 1.24
MRPL55-225ENST00000465268 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
MRPL55-225ENST00000465268 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
MRPL55-225ENST00000465268 NUP155O75694 1391 aa22.78■■□□□ 1.24
MRPL55-225ENST00000465268 SLC26A8Q96RN1 970 aa22.78■■□□□ 1.24
MRPL55-225ENST00000465268 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
MRPL55-225ENST00000465268 RRBP1Q9P2E9 1410 aaKnown RBP22.77■■□□□ 1.24
MRPL55-225ENST00000465268 TET3O43151 1660 aa22.77■■□□□ 1.24
MRPL55-225ENST00000465268 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
MRPL55-225ENST00000465268 HSPA1LP34931 641 aa22.76■■□□□ 1.23
MRPL55-225ENST00000465268 ILDR2Q71H61 639 aa22.73■■□□□ 1.23
MRPL55-225ENST00000465268 KDM5AP29375 1690 aaKnown RBP22.73■■□□□ 1.23
MRPL55-225ENST00000465268 ZFYVE9O95405 1425 aa22.73■■□□□ 1.23
MRPL55-225ENST00000465268 CHGAP10645 457 aaKnown RBP22.71■■□□□ 1.23
MRPL55-225ENST00000465268 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
MRPL55-225ENST00000465268 E9PCH4 1651 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms