RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 TIAM1Q13009 1591 aa26.77■■□□□ 1.88
COPS6-205ENST00000465027 TNRQ92752 1358 aa26.77■■□□□ 1.88
COPS6-205ENST00000465027 POLR1AO95602 1720 aaPredicted RBP26.76■■□□□ 1.88
COPS6-205ENST00000465027 SHANK2Q9UPX8 1470 aa26.75■■□□□ 1.87
COPS6-205ENST00000465027 DHX29Q7Z478 1369 aaKnown RBP26.73■■□□□ 1.87
COPS6-205ENST00000465027 TOM1O60784 492 aa26.73■■□□□ 1.87
COPS6-205ENST00000465027 CPS1P31327 1500 aa26.73■■□□□ 1.87
COPS6-205ENST00000465027 KIF3BO15066 747 aa26.72■■□□□ 1.87
COPS6-205ENST00000465027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.71■■□□□ 1.87
COPS6-205ENST00000465027 RTEL1-TNFRSF6BF6WH68 1400 aa26.69■■□□□ 1.86
COPS6-205ENST00000465027 VWDEQ8N2E2 1590 aa26.69■■□□□ 1.86
COPS6-205ENST00000465027 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
COPS6-205ENST00000465027 ALKQ9UM73 1620 aa26.68■■□□□ 1.86
COPS6-205ENST00000465027 PZPP20742 1482 aa26.68■■□□□ 1.86
COPS6-205ENST00000465027 KDM5DQ9BY66 1539 aa26.66■■□□□ 1.86
COPS6-205ENST00000465027 ANKLE2Q86XL3 938 aa26.65■■□□□ 1.86
COPS6-205ENST00000465027 EHBP1L1Q8N3D4 1523 aa26.64■■□□□ 1.85
COPS6-205ENST00000465027 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
COPS6-205ENST00000465027 NPHP4O75161 1426 aaPredicted RBP26.62■■□□□ 1.85
COPS6-205ENST00000465027 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
COPS6-205ENST00000465027 CEP162Q5TB80 1403 aa26.6■■□□□ 1.85
COPS6-205ENST00000465027 PHF23Q9BUL5 403 aaPredicted RBP26.6■■□□□ 1.85
COPS6-205ENST00000465027 CCDC141Q6ZP82 1450 aa26.6■■□□□ 1.85
COPS6-205ENST00000465027 UGGT1Q9NYU2 1555 aa26.59■■□□□ 1.85
COPS6-205ENST00000465027 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
COPS6-205ENST00000465027 CAMSAP2Q08AD1 1489 aa26.58■■□□□ 1.85
COPS6-205ENST00000465027 NLRP1Q9C000 1473 aa26.57■■□□□ 1.84
COPS6-205ENST00000465027 STRCP1A6NGW2 1772 aa26.57■■□□□ 1.84
COPS6-205ENST00000465027 MED14O60244 1454 aa26.56■■□□□ 1.84
COPS6-205ENST00000465027 FAM135AQ9P2D6 1515 aa26.55■■□□□ 1.84
COPS6-205ENST00000465027 DEPDC5O75140 1603 aa26.55■■□□□ 1.84
COPS6-205ENST00000465027 IQGAP1P46940 1657 aa26.54■■□□□ 1.84
COPS6-205ENST00000465027 NCOA2Q15596 1464 aa26.52■■□□□ 1.84
COPS6-205ENST00000465027 LRRC7Q96NW7 1537 aa26.52■■□□□ 1.84
COPS6-205ENST00000465027 ABCC3O15438 1527 aa26.46■■□□□ 1.83
COPS6-205ENST00000465027 RNF17Q9BXT8 1623 aaKnown RBP26.44■■□□□ 1.82
COPS6-205ENST00000465027 ARHGEF5Q12774 1597 aa26.44■■□□□ 1.82
COPS6-205ENST00000465027 RSPH4AQ5TD94 716 aa26.43■■□□□ 1.82
COPS6-205ENST00000465027 ERVK-7P63135 1459 aa26.42■■□□□ 1.82
COPS6-205ENST00000465027 SYNMO15061 1565 aa26.41■■□□□ 1.82
COPS6-205ENST00000465027 ZC3H13Q5T200 1668 aaKnown RBP26.41■■□□□ 1.82
COPS6-205ENST00000465027 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
COPS6-205ENST00000465027 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
COPS6-205ENST00000465027 RGS17Q9UGC6 210 aaPredicted RBP26.41■■□□□ 1.82
COPS6-205ENST00000465027 CFAP65Q6ZU64 1925 aaKnown RBP26.38■■□□□ 1.81
COPS6-205ENST00000465027 MROH1Q8NDA8 1641 aa26.38■■□□□ 1.81
COPS6-205ENST00000465027 UBR1Q8IWV7 1749 aa26.36■■□□□ 1.81
COPS6-205ENST00000465027 LTKP29376 864 aa26.36■■□□□ 1.81
COPS6-205ENST00000465027 CEP152O94986 1710 aa26.36■■□□□ 1.81
COPS6-205ENST00000465027 SCAF11Q99590 1463 aaKnown RBP26.34■■□□□ 1.81
COPS6-205ENST00000465027 XIRP1Q702N8 1843 aaKnown RBP26.32■■□□□ 1.8
COPS6-205ENST00000465027 MAST1Q9Y2H9 1570 aa26.31■■□□□ 1.8
COPS6-205ENST00000465027 TXNDC2Q86VQ3 553 aa26.3■■□□□ 1.8
COPS6-205ENST00000465027 EIF2AK4Q9P2K8 1649 aaKnown RBP26.29■■□□□ 1.8
COPS6-205ENST00000465027 ARHGAP23Q9P227 1491 aa26.28■■□□□ 1.8
COPS6-205ENST00000465027 SLIT1O75093 1534 aa26.25■■□□□ 1.79
COPS6-205ENST00000465027 LRRC9Q6ZRR7 1453 aa26.24■■□□□ 1.79
COPS6-205ENST00000465027 POTEAQ6S8J7 498 aa26.23■■□□□ 1.79
COPS6-205ENST00000465027 RBM33Q96EV2 1170 aaKnown RBP26.21■■□□□ 1.79
COPS6-205ENST00000465027 KANK4Q5T7N3 995 aaPredicted RBP26.2■■□□□ 1.78
COPS6-205ENST00000465027 PIK3C2BO00750 1634 aa26.19■■□□□ 1.78
COPS6-205ENST00000465027 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
COPS6-205ENST00000465027 FAM135BQ49AJ0 1406 aa26.18■■□□□ 1.78
COPS6-205ENST00000465027 EID1Q9Y6B2 187 aa26.18■■□□□ 1.78
COPS6-205ENST00000465027 TMEM94Q12767 1356 aa26.18■■□□□ 1.78
COPS6-205ENST00000465027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.17■■□□□ 1.788e-9■■■■■ 28
COPS6-205ENST00000465027 TMEM2Q9UHN6 1383 aa26.16■■□□□ 1.78
COPS6-205ENST00000465027 ARHGAP31Q2M1Z3 1444 aa26.15■■□□□ 1.78
COPS6-205ENST00000465027 PRDM15P57071 1507 aaPredicted RBP26.15■■□□□ 1.78
COPS6-205ENST00000465027 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.78
COPS6-205ENST00000465027 KIF15Q9NS87 1388 aa26.14■■□□□ 1.78
COPS6-205ENST00000465027 MYOM3Q5VTT5 1437 aa26.14■■□□□ 1.77
COPS6-205ENST00000465027 SLC26A8Q96RN1 970 aa26.13■■□□□ 1.77
COPS6-205ENST00000465027 ROBO1Q9Y6N7 1651 aa26.12■■□□□ 1.77
COPS6-205ENST00000465027 STAG3Q9UJ98 1225 aa26.12■■□□□ 1.77
COPS6-205ENST00000465027 MAP3K1Q13233 1512 aa26.12■■□□□ 1.77
COPS6-205ENST00000465027 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
COPS6-205ENST00000465027 PROSER2Q86WR7 435 aaPredicted RBP26.09■■□□□ 1.77
COPS6-205ENST00000465027 KCNA6P17658 529 aa26.08■■□□□ 1.77
COPS6-205ENST00000465027 IDI1Q13907 227 aa26.08■■□□□ 1.77
COPS6-205ENST00000465027 EFCAB6Q5THR3 1501 aa26.08■■□□□ 1.77
COPS6-205ENST00000465027 SETD1AO15047 1707 aaKnown RBP26.08■■□□□ 1.76
COPS6-205ENST00000465027 ABCC5O15440 1437 aa26.07■■□□□ 1.76
COPS6-205ENST00000465027 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
COPS6-205ENST00000465027 TET3O43151 1660 aa26.06■■□□□ 1.76
COPS6-205ENST00000465027 CROCC2H7BZ55 1655 aa26.05■■□□□ 1.76
COPS6-205ENST00000465027 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
COPS6-205ENST00000465027 KANK1Q14678 1352 aa25.99■■□□□ 1.75
COPS6-205ENST00000465027 CHIC2Q9UKJ5 165 aa25.98■■□□□ 1.75
COPS6-205ENST00000465027 KDM5AP29375 1690 aaKnown RBP25.98■■□□□ 1.75
COPS6-205ENST00000465027 PTPN23Q9H3S7 1636 aa25.98■■□□□ 1.75
COPS6-205ENST00000465027 NWD1Q149M9 1564 aa25.98■■□□□ 1.75
COPS6-205ENST00000465027 DAPK1P53355 1430 aa25.97■■□□□ 1.75
COPS6-205ENST00000465027 BCANQ96GW7 911 aa25.97■■□□□ 1.75
COPS6-205ENST00000465027 PHLPP1O60346 1717 aa25.97■■□□□ 1.75
COPS6-205ENST00000465027 ADGRB3O60242 1522 aa25.96■■□□□ 1.75
COPS6-205ENST00000465027 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
COPS6-205ENST00000465027 NKTRP30414 1462 aaKnown RBP25.96■■□□□ 1.75
COPS6-205ENST00000465027 MSH6P52701 1360 aa25.95■■□□□ 1.75
COPS6-205ENST00000465027 SLAIN2Q9P270 581 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms