RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
RTN4R-204ENST00000463936 PLA2R1Q13018 1463 aa22.9■■□□□ 1.26
RTN4R-204ENST00000463936 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
RTN4R-204ENST00000463936 PKD2Q13563 968 aa22.86■■□□□ 1.25
RTN4R-204ENST00000463936 PZPP20742 1482 aa22.85■■□□□ 1.25
RTN4R-204ENST00000463936 KDM5DQ9BY66 1539 aa22.85■■□□□ 1.25
RTN4R-204ENST00000463936 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
RTN4R-204ENST00000463936 WASHC2CQ9Y4E1 1318 aa22.83■■□□□ 1.25
RTN4R-204ENST00000463936 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
RTN4R-204ENST00000463936 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
RTN4R-204ENST00000463936 TNRQ92752 1358 aa22.83■■□□□ 1.25
RTN4R-204ENST00000463936 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
RTN4R-204ENST00000463936 NEURL4Q96JN8 1562 aa22.81■■□□□ 1.24
RTN4R-204ENST00000463936 IQSEC2Q5JU85 1478 aa22.81■■□□□ 1.24
RTN4R-204ENST00000463936 MYOM3Q5VTT5 1437 aa22.8■■□□□ 1.24
RTN4R-204ENST00000463936 MROH1Q8NDA8 1641 aa22.79■■□□□ 1.24
RTN4R-204ENST00000463936 MIA2Q96PC5 1412 aa22.79■■□□□ 1.24
RTN4R-204ENST00000463936 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
RTN4R-204ENST00000463936 FAM135AQ9P2D6 1515 aa22.78■■□□□ 1.24
RTN4R-204ENST00000463936 ILDR2Q71H61 639 aa22.77■■□□□ 1.24
RTN4R-204ENST00000463936 ABCC3O15438 1527 aa22.76■■□□□ 1.23
RTN4R-204ENST00000463936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
RTN4R-204ENST00000463936 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
RTN4R-204ENST00000463936 ABCC5O15440 1437 aa22.72■■□□□ 1.23
RTN4R-204ENST00000463936 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
RTN4R-204ENST00000463936 SPATA31D1Q6ZQQ2 1576 aa22.7■■□□□ 1.22
RTN4R-204ENST00000463936 CEP152O94986 1710 aa22.7■■□□□ 1.22
RTN4R-204ENST00000463936 UGGT1Q9NYU2 1555 aa22.69■■□□□ 1.22
RTN4R-204ENST00000463936 NLRP1Q9C000 1473 aa22.69■■□□□ 1.22
RTN4R-204ENST00000463936 DISP3Q9P2K9 1392 aa22.69■■□□□ 1.22
RTN4R-204ENST00000463936 UBAP1LF5GYI3 381 aa22.69■■□□□ 1.22
RTN4R-204ENST00000463936 CFAP65Q6ZU64 1925 aaKnown RBP22.68■■□□□ 1.22
RTN4R-204ENST00000463936 THEMISQ8N1K5 641 aaPredicted RBP22.67■■□□□ 1.22
RTN4R-204ENST00000463936 PTPN23Q9H3S7 1636 aa22.67■■□□□ 1.22
RTN4R-204ENST00000463936 VWDEQ8N2E2 1590 aa22.67■■□□□ 1.22
RTN4R-204ENST00000463936 ERVK-7P63135 1459 aa22.66■■□□□ 1.22
RTN4R-204ENST00000463936 ZC3H13Q5T200 1668 aaKnown RBP22.66■■□□□ 1.22
RTN4R-204ENST00000463936 ANKLE2Q86XL3 938 aa22.66■■□□□ 1.22
RTN4R-204ENST00000463936 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
RTN4R-204ENST00000463936 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
RTN4R-204ENST00000463936 SHANK2Q9UPX8 1470 aa22.66■■□□□ 1.22
RTN4R-204ENST00000463936 CROCC2H7BZ55 1655 aa22.65■■□□□ 1.22
RTN4R-204ENST00000463936 MED14O60244 1454 aa22.65■■□□□ 1.22
RTN4R-204ENST00000463936 DEPDC5O75140 1603 aa22.63■■□□□ 1.21
RTN4R-204ENST00000463936 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
RTN4R-204ENST00000463936 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
RTN4R-204ENST00000463936 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
RTN4R-204ENST00000463936 DAPK1P53355 1430 aa22.62■■□□□ 1.21
RTN4R-204ENST00000463936 FGD6Q6ZV73 1430 aa22.61■■□□□ 1.21
RTN4R-204ENST00000463936 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
RTN4R-204ENST00000463936 UBR1Q8IWV7 1749 aa22.6■■□□□ 1.21
RTN4R-204ENST00000463936 PRDM15P57071 1507 aaPredicted RBP22.59■■□□□ 1.21
RTN4R-204ENST00000463936 CHIC2Q9UKJ5 165 aa22.58■■□□□ 1.21
RTN4R-204ENST00000463936 CPS1P31327 1500 aa22.57■■□□□ 1.2
RTN4R-204ENST00000463936 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
RTN4R-204ENST00000463936 ERBINQ96RT1 1412 aa22.57■■□□□ 1.2
RTN4R-204ENST00000463936 LTKP29376 864 aa22.56■■□□□ 1.2
RTN4R-204ENST00000463936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.2
RTN4R-204ENST00000463936 ARHGAP31Q2M1Z3 1444 aa22.56■■□□□ 1.2
RTN4R-204ENST00000463936 HSPA1LP34931 641 aa22.54■■□□□ 1.2
RTN4R-204ENST00000463936 PIP4K2BP78356 416 aa22.53■■□□□ 1.2
RTN4R-204ENST00000463936 APLP2Q06481 763 aa22.53■■□□□ 1.2
RTN4R-204ENST00000463936 ARHGAP23Q9P227 1491 aa22.52■■□□□ 1.2
RTN4R-204ENST00000463936 LRRC7Q96NW7 1537 aa22.5■■□□□ 1.19
RTN4R-204ENST00000463936 SLIT1O75093 1534 aa22.49■■□□□ 1.19
RTN4R-204ENST00000463936 PIK3C2BO00750 1634 aa22.49■■□□□ 1.19
RTN4R-204ENST00000463936 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
RTN4R-204ENST00000463936 SOCS7O14512 581 aa22.47■■□□□ 1.19
RTN4R-204ENST00000463936 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
RTN4R-204ENST00000463936 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
RTN4R-204ENST00000463936 TOM1O60784 492 aa22.46■■□□□ 1.19
RTN4R-204ENST00000463936 IDI1Q13907 227 aa22.46■■□□□ 1.19
RTN4R-204ENST00000463936 ANKRD30AQ9BXX3 1397 aa22.46■■□□□ 1.19
RTN4R-204ENST00000463936 LMTK2Q8IWU2 1503 aa22.46■■□□□ 1.19
RTN4R-204ENST00000463936 SYNMO15061 1565 aa22.45■■□□□ 1.18
RTN4R-204ENST00000463936 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
RTN4R-204ENST00000463936 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
RTN4R-204ENST00000463936 XIRP1Q702N8 1843 aaKnown RBP22.41■■□□□ 1.18
RTN4R-204ENST00000463936 FAM50AQ14320 339 aaKnown RBP22.41■■□□□ 1.18
RTN4R-204ENST00000463936 NOS1P29475 1434 aa22.4■■□□□ 1.18
RTN4R-204ENST00000463936 KANK1Q14678 1352 aa22.39■■□□□ 1.18
RTN4R-204ENST00000463936 EFCAB6Q5THR3 1501 aa22.38■■□□□ 1.17
RTN4R-204ENST00000463936 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
RTN4R-204ENST00000463936 TET3O43151 1660 aa22.36■■□□□ 1.17
RTN4R-204ENST00000463936 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
RTN4R-204ENST00000463936 KDM5AP29375 1690 aaKnown RBP22.35■■□□□ 1.17
RTN4R-204ENST00000463936 ANKRD50Q9ULJ7 1429 aa22.34■■□□□ 1.17
RTN4R-204ENST00000463936 EID1Q9Y6B2 187 aa22.33■■□□□ 1.17
RTN4R-204ENST00000463936 SLC26A8Q96RN1 970 aa22.32■■□□□ 1.16
RTN4R-204ENST00000463936 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
RTN4R-204ENST00000463936 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
RTN4R-204ENST00000463936 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
RTN4R-204ENST00000463936 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
RTN4R-204ENST00000463936 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
RTN4R-204ENST00000463936 SLC52A1Q9NWF4 448 aa22.26■■□□□ 1.15
RTN4R-204ENST00000463936 ZFYVE9O95405 1425 aa22.25■■□□□ 1.15
RTN4R-204ENST00000463936 KCNA6P17658 529 aa22.25■■□□□ 1.15
RTN4R-204ENST00000463936 UNC13BO14795 1591 aa22.25■■□□□ 1.15
RTN4R-204ENST00000463936 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
RTN4R-204ENST00000463936 RPRD2Q5VT52 1461 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms