RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 MAST1Q9Y2H9 1570 aa18.69■□□□□ 0.58
RTCB-202ENST00000463455 CLTCQ00610 1675 aaKnown RBP18.66■□□□□ 0.58
RTCB-202ENST00000463455 GGT6Q6P531 493 aa18.65■□□□□ 0.58
RTCB-202ENST00000463455 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
RTCB-202ENST00000463455 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
RTCB-202ENST00000463455 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
RTCB-202ENST00000463455 PTPRKQ15262 1439 aa18.62■□□□□ 0.57
RTCB-202ENST00000463455 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
RTCB-202ENST00000463455 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
RTCB-202ENST00000463455 KIF3BO15066 747 aa18.6■□□□□ 0.57
RTCB-202ENST00000463455 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
RTCB-202ENST00000463455 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
RTCB-202ENST00000463455 EIF2AK4Q9P2K8 1649 aaKnown RBP18.6■□□□□ 0.57
RTCB-202ENST00000463455 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
RTCB-202ENST00000463455 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
RTCB-202ENST00000463455 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
RTCB-202ENST00000463455 FGD6Q6ZV73 1430 aa18.58■□□□□ 0.57
RTCB-202ENST00000463455 PTPRTO14522 1441 aa18.57■□□□□ 0.56
RTCB-202ENST00000463455 MYO3AQ8NEV4 1616 aa18.57■□□□□ 0.56
RTCB-202ENST00000463455 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
RTCB-202ENST00000463455 DUOX2Q9NRD8 1548 aa18.56■□□□□ 0.56
RTCB-202ENST00000463455 FBXO41Q8TF61 875 aa18.56■□□□□ 0.56
RTCB-202ENST00000463455 PZPP20742 1482 aa18.56■□□□□ 0.56
RTCB-202ENST00000463455 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
RTCB-202ENST00000463455 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
RTCB-202ENST00000463455 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
RTCB-202ENST00000463455 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
RTCB-202ENST00000463455 DNMT1P26358 1616 aaKnown RBP18.54■□□□□ 0.56
RTCB-202ENST00000463455 ABCC5O15440 1437 aa18.54■□□□□ 0.56
RTCB-202ENST00000463455 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
RTCB-202ENST00000463455 DAPK1P53355 1430 aa18.52■□□□□ 0.56
RTCB-202ENST00000463455 ERBINQ96RT1 1412 aa18.52■□□□□ 0.56
RTCB-202ENST00000463455 CAMSAP1Q5T5Y3 1602 aa18.52■□□□□ 0.55
RTCB-202ENST00000463455 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.55
RTCB-202ENST00000463455 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
RTCB-202ENST00000463455 ABCC3O15438 1527 aa18.49■□□□□ 0.55
RTCB-202ENST00000463455 RNF216Q9NWF9 866 aaPredicted RBP18.49■□□□□ 0.55
RTCB-202ENST00000463455 TNRQ92752 1358 aa18.49■□□□□ 0.55
RTCB-202ENST00000463455 PKD2Q13563 968 aa18.48■□□□□ 0.55
RTCB-202ENST00000463455 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
RTCB-202ENST00000463455 NLRP1Q9C000 1473 aa18.47■□□□□ 0.55
RTCB-202ENST00000463455 CERKQ8TCT0 537 aa18.47■□□□□ 0.55
RTCB-202ENST00000463455 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
RTCB-202ENST00000463455 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
RTCB-202ENST00000463455 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
RTCB-202ENST00000463455 SPATA31D1Q6ZQQ2 1576 aa18.43■□□□□ 0.54
RTCB-202ENST00000463455 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
RTCB-202ENST00000463455 FBXO31Q5XUX0 539 aaPredicted RBP18.43■□□□□ 0.54
RTCB-202ENST00000463455 ARHGAP31Q2M1Z3 1444 aa18.42■□□□□ 0.54
RTCB-202ENST00000463455 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
RTCB-202ENST00000463455 ERVK-7P63135 1459 aa18.4■□□□□ 0.54
RTCB-202ENST00000463455 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
RTCB-202ENST00000463455 KANK1Q14678 1352 aa18.39■□□□□ 0.53
RTCB-202ENST00000463455 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
RTCB-202ENST00000463455 CEP152O94986 1710 aa18.38■□□□□ 0.53
RTCB-202ENST00000463455 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
RTCB-202ENST00000463455 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
RTCB-202ENST00000463455 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
RTCB-202ENST00000463455 UGGT1Q9NYU2 1555 aa18.38■□□□□ 0.53
RTCB-202ENST00000463455 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
RTCB-202ENST00000463455 HOXD11P31277 338 aaPredicted RBP18.36■□□□□ 0.53
RTCB-202ENST00000463455 VWDEQ8N2E2 1590 aa18.36■□□□□ 0.53
RTCB-202ENST00000463455 FAM50AQ14320 339 aaKnown RBP18.35■□□□□ 0.53
RTCB-202ENST00000463455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
RTCB-202ENST00000463455 CHIC2Q9UKJ5 165 aa18.34■□□□□ 0.53
RTCB-202ENST00000463455 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
RTCB-202ENST00000463455 NEURL4Q96JN8 1562 aa18.32■□□□□ 0.52
RTCB-202ENST00000463455 MED14O60244 1454 aa18.32■□□□□ 0.52
RTCB-202ENST00000463455 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
RTCB-202ENST00000463455 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
RTCB-202ENST00000463455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
RTCB-202ENST00000463455 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
RTCB-202ENST00000463455 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
RTCB-202ENST00000463455 KDM5AP29375 1690 aaKnown RBP18.27■□□□□ 0.52
RTCB-202ENST00000463455 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
RTCB-202ENST00000463455 ZNF335Q9H4Z2 1342 aaPredicted RBP18.26■□□□□ 0.51
RTCB-202ENST00000463455 CFAP65Q6ZU64 1925 aaKnown RBP18.26■□□□□ 0.51
RTCB-202ENST00000463455 NPHP4O75161 1426 aaPredicted RBP18.25■□□□□ 0.51
RTCB-202ENST00000463455 SLIT1O75093 1534 aa18.25■□□□□ 0.51
RTCB-202ENST00000463455 CPS1P31327 1500 aa18.25■□□□□ 0.51
RTCB-202ENST00000463455 ARHGAP23Q9P227 1491 aa18.24■□□□□ 0.51
RTCB-202ENST00000463455 UNC13BO14795 1591 aa18.24■□□□□ 0.51
RTCB-202ENST00000463455 NOS1P29475 1434 aa18.23■□□□□ 0.51
RTCB-202ENST00000463455 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
RTCB-202ENST00000463455 TET3O43151 1660 aa18.22■□□□□ 0.51
RTCB-202ENST00000463455 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
RTCB-202ENST00000463455 PIK3C2BO00750 1634 aa18.2■□□□□ 0.5
RTCB-202ENST00000463455 GCC2Q8IWJ2 1684 aa18.19■□□□□ 0.5
RTCB-202ENST00000463455 SYNMO15061 1565 aa18.19■□□□□ 0.5
RTCB-202ENST00000463455 SLC52A1Q9NWF4 448 aa18.19■□□□□ 0.5
RTCB-202ENST00000463455 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
RTCB-202ENST00000463455 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
RTCB-202ENST00000463455 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
RTCB-202ENST00000463455 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
RTCB-202ENST00000463455 IDI1Q13907 227 aa18.16■□□□□ 0.5
RTCB-202ENST00000463455 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
RTCB-202ENST00000463455 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
RTCB-202ENST00000463455 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
RTCB-202ENST00000463455 LTKP29376 864 aa18.13■□□□□ 0.49
RTCB-202ENST00000463455 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms