RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 PKD2Q13563 968 aa27.3■■□□□ 1.96
SF1-212ENST00000463343 PLA2R1Q13018 1463 aa27.3■■□□□ 1.96
SF1-212ENST00000463343 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
SF1-212ENST00000463343 TCOF1Q13428 1488 aaKnown RBP27.29■■□□□ 1.96
SF1-212ENST00000463343 ZNF142P52746 1687 aaPredicted RBP27.27■■□□□ 1.96
SF1-212ENST00000463343 DHX29Q7Z478 1369 aaKnown RBP27.27■■□□□ 1.96
SF1-212ENST00000463343 FAM50AQ14320 339 aaKnown RBP27.25■■□□□ 1.95
SF1-212ENST00000463343 NCKAP5LQ9HCH0 1330 aa27.24■■□□□ 1.95
SF1-212ENST00000463343 ABCC5O15440 1437 aa27.23■■□□□ 1.95
SF1-212ENST00000463343 MYO3AQ8NEV4 1616 aa27.23■■□□□ 1.95
SF1-212ENST00000463343 CEP170BQ9Y4F5 1589 aaPredicted RBP27.22■■□□□ 1.95
SF1-212ENST00000463343 FAM135AQ9P2D6 1515 aa27.19■■□□□ 1.94
SF1-212ENST00000463343 DAPK1P53355 1430 aa27.17■■□□□ 1.94
SF1-212ENST00000463343 DISP3Q9P2K9 1392 aa27.17■■□□□ 1.94
SF1-212ENST00000463343 A2ML1A8K2U0 1454 aa27.17■■□□□ 1.94
SF1-212ENST00000463343 MAST1Q9Y2H9 1570 aa27.15■■□□□ 1.94
SF1-212ENST00000463343 ZNF335Q9H4Z2 1342 aaPredicted RBP27.15■■□□□ 1.94
SF1-212ENST00000463343 KIF3BO15066 747 aa27.14■■□□□ 1.94
SF1-212ENST00000463343 DNMT1P26358 1616 aaKnown RBP27.13■■□□□ 1.93
SF1-212ENST00000463343 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
SF1-212ENST00000463343 SHANK2Q9UPX8 1470 aa27.1■■□□□ 1.93
SF1-212ENST00000463343 PZPP20742 1482 aa27.09■■□□□ 1.93
SF1-212ENST00000463343 TNRQ92752 1358 aa27.09■■□□□ 1.93
SF1-212ENST00000463343 KDM5DQ9BY66 1539 aa27.08■■□□□ 1.93
SF1-212ENST00000463343 RRP7BPQ9NSQ0 103 aa27.08■■□□□ 1.93
SF1-212ENST00000463343 WASHC2CQ9Y4E1 1318 aa27.08■■□□□ 1.93
SF1-212ENST00000463343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.08■■□□□ 1.93
SF1-212ENST00000463343 ILDR2Q71H61 639 aa27.07■■□□□ 1.92
SF1-212ENST00000463343 FBXO31Q5XUX0 539 aaPredicted RBP27.06■■□□□ 1.92
SF1-212ENST00000463343 RRBP1Q9P2E9 1410 aaKnown RBP27.06■■□□□ 1.92
SF1-212ENST00000463343 UBAP1LF5GYI3 381 aa27.05■■□□□ 1.92
SF1-212ENST00000463343 CROCC2H7BZ55 1655 aa27.05■■□□□ 1.92
SF1-212ENST00000463343 SOCS7O14512 581 aa27.03■■□□□ 1.92
SF1-212ENST00000463343 ANKRD30AQ9BXX3 1397 aa27.02■■□□□ 1.92
SF1-212ENST00000463343 KIF15Q9NS87 1388 aa27.02■■□□□ 1.92
SF1-212ENST00000463343 ITGAEP38570 1179 aa27.02■■□□□ 1.92
SF1-212ENST00000463343 THEMISQ8N1K5 641 aaPredicted RBP27.02■■□□□ 1.92
SF1-212ENST00000463343 NLRP1Q9C000 1473 aa27■■□□□ 1.91
SF1-212ENST00000463343 SPATA31D1Q6ZQQ2 1576 aa27■■□□□ 1.91
SF1-212ENST00000463343 ANKLE2Q86XL3 938 aa26.99■■□□□ 1.91
SF1-212ENST00000463343 DUOX2Q9NRD8 1548 aa26.97■■□□□ 1.91
SF1-212ENST00000463343 POLR1AO95602 1720 aaPredicted RBP26.97■■□□□ 1.91
SF1-212ENST00000463343 ADGRL2O95490 1459 aa26.97■■□□□ 1.91
SF1-212ENST00000463343 CPS1P31327 1500 aa26.95■■□□□ 1.91
SF1-212ENST00000463343 NEURL4Q96JN8 1562 aa26.95■■□□□ 1.9
SF1-212ENST00000463343 MED14O60244 1454 aa26.93■■□□□ 1.9
SF1-212ENST00000463343 RNF17Q9BXT8 1623 aaKnown RBP26.92■■□□□ 1.9
SF1-212ENST00000463343 UGGT1Q9NYU2 1555 aa26.91■■□□□ 1.9
SF1-212ENST00000463343 DEPDC5O75140 1603 aa26.9■■□□□ 1.9
SF1-212ENST00000463343 ROCK1Q13464 1354 aa26.9■■□□□ 1.9
SF1-212ENST00000463343 TOM1O60784 492 aa26.9■■□□□ 1.9
SF1-212ENST00000463343 ERBINQ96RT1 1412 aa26.9■■□□□ 1.9
SF1-212ENST00000463343 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.89
SF1-212ENST00000463343 EIF2AK4Q9P2K8 1649 aaKnown RBP26.88■■□□□ 1.89
SF1-212ENST00000463343 ABCC3O15438 1527 aa26.86■■□□□ 1.89
SF1-212ENST00000463343 NPHP4O75161 1426 aaPredicted RBP26.85■■□□□ 1.89
SF1-212ENST00000463343 VWDEQ8N2E2 1590 aa26.84■■□□□ 1.89
SF1-212ENST00000463343 ANKRD50Q9ULJ7 1429 aa26.83■■□□□ 1.89
SF1-212ENST00000463343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.82■■□□□ 1.881e-12■■■□□ 15.5
SF1-212ENST00000463343 ERVK-7P63135 1459 aa26.8■■□□□ 1.88
SF1-212ENST00000463343 MROH1Q8NDA8 1641 aa26.79■■□□□ 1.88
SF1-212ENST00000463343 IQGAP1P46940 1657 aa26.76■■□□□ 1.87
SF1-212ENST00000463343 ARHGAP31Q2M1Z3 1444 aa26.76■■□□□ 1.87
SF1-212ENST00000463343 HSPA1LP34931 641 aa26.76■■□□□ 1.87
SF1-212ENST00000463343 PIP4K2BP78356 416 aa26.75■■□□□ 1.87
SF1-212ENST00000463343 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
SF1-212ENST00000463343 KANK1Q14678 1352 aa26.71■■□□□ 1.87
SF1-212ENST00000463343 PRDM15P57071 1507 aaPredicted RBP26.7■■□□□ 1.87
SF1-212ENST00000463343 NAIPQ13075 1403 aa26.7■■□□□ 1.86
SF1-212ENST00000463343 CFAP65Q6ZU64 1925 aaKnown RBP26.7■■□□□ 1.86
SF1-212ENST00000463343 CEP152O94986 1710 aa26.69■■□□□ 1.86
SF1-212ENST00000463343 UBR1Q8IWV7 1749 aa26.69■■□□□ 1.86
SF1-212ENST00000463343 LRRC7Q96NW7 1537 aa26.67■■□□□ 1.86
SF1-212ENST00000463343 ARHGAP23Q9P227 1491 aa26.67■■□□□ 1.86
SF1-212ENST00000463343 SLIT1O75093 1534 aa26.66■■□□□ 1.86
SF1-212ENST00000463343 ALKQ9UM73 1620 aa26.66■■□□□ 1.86
SF1-212ENST00000463343 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
SF1-212ENST00000463343 STRCP1A6NGW2 1772 aa26.65■■□□□ 1.86
SF1-212ENST00000463343 HFM1A2PYH4 1435 aa26.64■■□□□ 1.85
SF1-212ENST00000463343 SYNMO15061 1565 aa26.63■■□□□ 1.85
SF1-212ENST00000463343 LTKP29376 864 aa26.63■■□□□ 1.85
SF1-212ENST00000463343 TXNDC2Q86VQ3 553 aa26.63■■□□□ 1.85
SF1-212ENST00000463343 MED1Q15648 1581 aaPredicted RBP26.62■■□□□ 1.85
SF1-212ENST00000463343 LMTK2Q8IWU2 1503 aa26.61■■□□□ 1.85
SF1-212ENST00000463343 EID1Q9Y6B2 187 aa26.61■■□□□ 1.85
SF1-212ENST00000463343 NUP155O75694 1391 aa26.6■■□□□ 1.85
SF1-212ENST00000463343 UNC13BO14795 1591 aa26.58■■□□□ 1.85
SF1-212ENST00000463343 KDM5AP29375 1690 aaKnown RBP26.57■■□□□ 1.84
SF1-212ENST00000463343 TMEM2Q9UHN6 1383 aa26.56■■□□□ 1.84
SF1-212ENST00000463343 GCC2Q8IWJ2 1684 aa26.55■■□□□ 1.84
SF1-212ENST00000463343 IDI1Q13907 227 aa26.52■■□□□ 1.84
SF1-212ENST00000463343 PIK3C2BO00750 1634 aa26.51■■□□□ 1.83
SF1-212ENST00000463343 STAG3Q9UJ98 1225 aa26.51■■□□□ 1.83
SF1-212ENST00000463343 TRIM52Q96A61 297 aa26.5■■□□□ 1.83
SF1-212ENST00000463343 EFCAB6Q5THR3 1501 aa26.49■■□□□ 1.83
SF1-212ENST00000463343 IQGAP3Q86VI3 1631 aa26.49■■□□□ 1.83
SF1-212ENST00000463343 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
SF1-212ENST00000463343 NOS1P29475 1434 aa26.48■■□□□ 1.83
SF1-212ENST00000463343 SLC52A1Q9NWF4 448 aa26.47■■□□□ 1.83
SF1-212ENST00000463343 TET3O43151 1660 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms