RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 DAPK1P53355 1430 aa25.08■■□□□ 1.61
SNX21-206ENST00000462307 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
SNX21-206ENST00000462307 RNF17Q9BXT8 1623 aaKnown RBP25.06■■□□□ 1.6
SNX21-206ENST00000462307 WASHC2CQ9Y4E1 1318 aa25.06■■□□□ 1.6
SNX21-206ENST00000462307 KDM5DQ9BY66 1539 aa25.06■■□□□ 1.6
SNX21-206ENST00000462307 DUOX2Q9NRD8 1548 aa25.06■■□□□ 1.6
SNX21-206ENST00000462307 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
SNX21-206ENST00000462307 KIF15Q9NS87 1388 aa25.02■■□□□ 1.6
SNX21-206ENST00000462307 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
SNX21-206ENST00000462307 PZPP20742 1482 aa25.01■■□□□ 1.59
SNX21-206ENST00000462307 ILDR1Q86SU0 546 aaPredicted RBP25■■□□□ 1.59
SNX21-206ENST00000462307 ZNF142P52746 1687 aaPredicted RBP24.98■■□□□ 1.59
SNX21-206ENST00000462307 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
SNX21-206ENST00000462307 MYO3AQ8NEV4 1616 aa24.98■■□□□ 1.59
SNX21-206ENST00000462307 NCOA1Q15788 1441 aa24.98■■□□□ 1.59
SNX21-206ENST00000462307 ERBINQ96RT1 1412 aa24.98■■□□□ 1.59
SNX21-206ENST00000462307 FBXO31Q5XUX0 539 aaPredicted RBP24.98■■□□□ 1.59
SNX21-206ENST00000462307 ANKRD30AQ9BXX3 1397 aa24.96■■□□□ 1.59
SNX21-206ENST00000462307 ZC3H13Q5T200 1668 aaKnown RBP24.96■■□□□ 1.59
SNX21-206ENST00000462307 PTPRTO14522 1441 aa24.95■■□□□ 1.59
SNX21-206ENST00000462307 CHIC2Q9UKJ5 165 aa24.95■■□□□ 1.58
SNX21-206ENST00000462307 ABCC3O15438 1527 aa24.95■■□□□ 1.58
SNX21-206ENST00000462307 CEP170BQ9Y4F5 1589 aaPredicted RBP24.94■■□□□ 1.58
SNX21-206ENST00000462307 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
SNX21-206ENST00000462307 ADGRL2O95490 1459 aa24.94■■□□□ 1.58
SNX21-206ENST00000462307 CAMSAP1Q5T5Y3 1602 aa24.94■■□□□ 1.58
SNX21-206ENST00000462307 TNRQ92752 1358 aa24.93■■□□□ 1.58
SNX21-206ENST00000462307 A2ML1A8K2U0 1454 aa24.92■■□□□ 1.58
SNX21-206ENST00000462307 PLA2R1Q13018 1463 aa24.9■■□□□ 1.58
SNX21-206ENST00000462307 PRDM15P57071 1507 aaPredicted RBP24.9■■□□□ 1.58
SNX21-206ENST00000462307 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
SNX21-206ENST00000462307 PKD2Q13563 968 aa24.88■■□□□ 1.57
SNX21-206ENST00000462307 CEP152O94986 1710 aa24.88■■□□□ 1.57
SNX21-206ENST00000462307 CFAP65Q6ZU64 1925 aaKnown RBP24.88■■□□□ 1.57
SNX21-206ENST00000462307 FBXO41Q8TF61 875 aa24.87■■□□□ 1.57
SNX21-206ENST00000462307 SPATA31D1Q6ZQQ2 1576 aa24.86■■□□□ 1.57
SNX21-206ENST00000462307 ARHGAP31Q2M1Z3 1444 aa24.86■■□□□ 1.57
SNX21-206ENST00000462307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.85■■□□□ 1.57
SNX21-206ENST00000462307 NLRP1Q9C000 1473 aa24.84■■□□□ 1.57
SNX21-206ENST00000462307 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
SNX21-206ENST00000462307 NCKAP5LQ9HCH0 1330 aa24.84■■□□□ 1.57
SNX21-206ENST00000462307 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.57
SNX21-206ENST00000462307 VWDEQ8N2E2 1590 aa24.82■■□□□ 1.56
SNX21-206ENST00000462307 ERVK-7P63135 1459 aa24.82■■□□□ 1.56
SNX21-206ENST00000462307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.563e-6■■□□□ 11.7
SNX21-206ENST00000462307 LMTK2Q8IWU2 1503 aa24.8■■□□□ 1.56
SNX21-206ENST00000462307 KANK1Q14678 1352 aa24.8■■□□□ 1.56
SNX21-206ENST00000462307 ANKRD50Q9ULJ7 1429 aa24.79■■□□□ 1.56
SNX21-206ENST00000462307 THEMISQ8N1K5 641 aaPredicted RBP24.79■■□□□ 1.56
SNX21-206ENST00000462307 ROCK1Q13464 1354 aa24.79■■□□□ 1.56
SNX21-206ENST00000462307 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
SNX21-206ENST00000462307 LTBP4Q8N2S1 1624 aa24.74■■□□□ 1.55
SNX21-206ENST00000462307 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
SNX21-206ENST00000462307 RRBP1Q9P2E9 1410 aaKnown RBP24.71■■□□□ 1.55
SNX21-206ENST00000462307 POLR1AO95602 1720 aaPredicted RBP24.71■■□□□ 1.55
SNX21-206ENST00000462307 NEURL4Q96JN8 1562 aa24.69■■□□□ 1.54
SNX21-206ENST00000462307 UBR1Q8IWV7 1749 aa24.67■■□□□ 1.54
SNX21-206ENST00000462307 MED14O60244 1454 aa24.67■■□□□ 1.54
SNX21-206ENST00000462307 EFCAB6Q5THR3 1501 aa24.66■■□□□ 1.54
SNX21-206ENST00000462307 NOS1P29475 1434 aa24.65■■□□□ 1.54
SNX21-206ENST00000462307 ZNF335Q9H4Z2 1342 aaPredicted RBP24.64■■□□□ 1.54
SNX21-206ENST00000462307 UNC13BO14795 1591 aa24.64■■□□□ 1.54
SNX21-206ENST00000462307 ITGAEP38570 1179 aa24.64■■□□□ 1.54
SNX21-206ENST00000462307 IDI1Q13907 227 aa24.63■■□□□ 1.53
SNX21-206ENST00000462307 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
SNX21-206ENST00000462307 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
SNX21-206ENST00000462307 TET3O43151 1660 aa24.61■■□□□ 1.53
SNX21-206ENST00000462307 KDM5AP29375 1690 aaKnown RBP24.6■■□□□ 1.53
SNX21-206ENST00000462307 ARHGAP23Q9P227 1491 aa24.6■■□□□ 1.53
SNX21-206ENST00000462307 SYNMO15061 1565 aa24.59■■□□□ 1.53
SNX21-206ENST00000462307 SLC52A1Q9NWF4 448 aa24.59■■□□□ 1.53
SNX21-206ENST00000462307 PIK3C2BO00750 1634 aa24.59■■□□□ 1.53
SNX21-206ENST00000462307 SLIT1O75093 1534 aa24.59■■□□□ 1.53
SNX21-206ENST00000462307 NPHP4O75161 1426 aaPredicted RBP24.59■■□□□ 1.53
SNX21-206ENST00000462307 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
SNX21-206ENST00000462307 LTKP29376 864 aa24.56■■□□□ 1.52
SNX21-206ENST00000462307 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
SNX21-206ENST00000462307 IQGAP1P46940 1657 aa24.55■■□□□ 1.52
SNX21-206ENST00000462307 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
SNX21-206ENST00000462307 TXNDC2Q86VQ3 553 aa24.53■■□□□ 1.52
SNX21-206ENST00000462307 NUP155O75694 1391 aa24.53■■□□□ 1.52
SNX21-206ENST00000462307 TMEM2Q9UHN6 1383 aa24.53■■□□□ 1.52
SNX21-206ENST00000462307 E9PCH4 1651 aa24.51■■□□□ 1.51
SNX21-206ENST00000462307 STAG3Q9UJ98 1225 aa24.51■■□□□ 1.51
SNX21-206ENST00000462307 EID1Q9Y6B2 187 aa24.5■■□□□ 1.51
SNX21-206ENST00000462307 NAIPQ13075 1403 aa24.49■■□□□ 1.51
SNX21-206ENST00000462307 CPS1P31327 1500 aa24.49■■□□□ 1.51
SNX21-206ENST00000462307 ADGRB3O60242 1522 aa24.45■■□□□ 1.51
SNX21-206ENST00000462307 MYO5BQ9ULV0 1848 aa24.42■■□□□ 1.5
SNX21-206ENST00000462307 STRCP1A6NGW2 1772 aa24.42■■□□□ 1.5
SNX21-206ENST00000462307 HFM1A2PYH4 1435 aa24.42■■□□□ 1.5
SNX21-206ENST00000462307 TMEM131LA2VDJ0 1609 aa24.42■■□□□ 1.5
SNX21-206ENST00000462307 ZFYVE9O95405 1425 aa24.38■■□□□ 1.49
SNX21-206ENST00000462307 UBAP1LF5GYI3 381 aa24.36■■□□□ 1.49
SNX21-206ENST00000462307 HDGFP51858 240 aaKnown RBP24.36■■□□□ 1.49
SNX21-206ENST00000462307 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
SNX21-206ENST00000462307 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
SNX21-206ENST00000462307 RIMS2Q9UQ26 1411 aa24.32■■□□□ 1.48
SNX21-206ENST00000462307 TOM1O60784 492 aa24.3■■□□□ 1.48
SNX21-206ENST00000462307 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms