RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 NISCHQ9Y2I1 1504 aa39.84■■■■□ 3.97
SNX21-206ENST00000462307 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
SNX21-206ENST00000462307 ABCC9O60706 1549 aa35.02■■■■□ 3.2
SNX21-206ENST00000462307 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
SNX21-206ENST00000462307 NACADO15069 1562 aa33.51■■■□□ 2.96
SNX21-206ENST00000462307 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
SNX21-206ENST00000462307 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
SNX21-206ENST00000462307 ZCCHC6Q5VYS8 1495 aaKnown RBP33.1■■■□□ 2.89
SNX21-206ENST00000462307 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
SNX21-206ENST00000462307 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
SNX21-206ENST00000462307 PABPN1Q86U42 306 aaKnown RBP eCLIP32.71■■■□□ 2.83
SNX21-206ENST00000462307 BICRAQ9NZM4 1560 aa32.63■■■□□ 2.81
SNX21-206ENST00000462307 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
SNX21-206ENST00000462307 SCRIBQ14160 1630 aa32.32■■■□□ 2.76
SNX21-206ENST00000462307 SHROOM4Q9ULL8 1493 aa32.26■■■□□ 2.75
SNX21-206ENST00000462307 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.67
SNX21-206ENST00000462307 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
SNX21-206ENST00000462307 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
SNX21-206ENST00000462307 NCAPD3P42695 1498 aa30.96■■■□□ 2.55
SNX21-206ENST00000462307 SMARCA4P51532 1647 aa30.95■■■□□ 2.55
SNX21-206ENST00000462307 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.54
SNX21-206ENST00000462307 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
SNX21-206ENST00000462307 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
SNX21-206ENST00000462307 HMGXB3Q12766 1538 aa30.73■■■□□ 2.51
SNX21-206ENST00000462307 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
SNX21-206ENST00000462307 MROH2BQ7Z745 1585 aa30.68■■■□□ 2.5
SNX21-206ENST00000462307 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.48
SNX21-206ENST00000462307 WIZO95785 1651 aa30.33■■■□□ 2.45
SNX21-206ENST00000462307 NESP48681 1621 aa30.25■■■□□ 2.43
SNX21-206ENST00000462307 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
SNX21-206ENST00000462307 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
SNX21-206ENST00000462307 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
SNX21-206ENST00000462307 CUX2O14529 1486 aa30.06■■■□□ 2.4
SNX21-206ENST00000462307 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
SNX21-206ENST00000462307 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
SNX21-206ENST00000462307 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
SNX21-206ENST00000462307 KIF21AQ7Z4S6 1674 aa29.87■■■□□ 2.37
SNX21-206ENST00000462307 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
SNX21-206ENST00000462307 CFTRP13569 1480 aa29.78■■■□□ 2.36
SNX21-206ENST00000462307 CCDC88BA6NC98 1476 aa29.66■■■□□ 2.34
SNX21-206ENST00000462307 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
SNX21-206ENST00000462307 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
SNX21-206ENST00000462307 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
SNX21-206ENST00000462307 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
SNX21-206ENST00000462307 WDR62O43379 1518 aa29.57■■■□□ 2.32
SNX21-206ENST00000462307 PRDM2Q13029 1718 aa29.5■■■□□ 2.31
SNX21-206ENST00000462307 URB2Q14146 1524 aaKnown RBP29.36■■■□□ 2.29
SNX21-206ENST00000462307 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
SNX21-206ENST00000462307 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
SNX21-206ENST00000462307 TOPBP1Q92547 1522 aa29.13■■■□□ 2.25
SNX21-206ENST00000462307 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
SNX21-206ENST00000462307 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
SNX21-206ENST00000462307 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
SNX21-206ENST00000462307 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
SNX21-206ENST00000462307 TARBP1Q13395 1621 aaKnown RBP28.86■■■□□ 2.21
SNX21-206ENST00000462307 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
SNX21-206ENST00000462307 CUX1P39880 1505 aa28.79■■■□□ 2.2
SNX21-206ENST00000462307 SOGA1O94964 1423 aa28.76■■■□□ 2.19
SNX21-206ENST00000462307 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
SNX21-206ENST00000462307 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
SNX21-206ENST00000462307 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
SNX21-206ENST00000462307 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
SNX21-206ENST00000462307 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
SNX21-206ENST00000462307 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
SNX21-206ENST00000462307 WRNQ14191 1432 aaPredicted RBP eCLIP28.48■■■□□ 2.15
SNX21-206ENST00000462307 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
SNX21-206ENST00000462307 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
SNX21-206ENST00000462307 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
SNX21-206ENST00000462307 CHD1O14646 1710 aa28.46■■■□□ 2.15
SNX21-206ENST00000462307 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
SNX21-206ENST00000462307 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
SNX21-206ENST00000462307 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
SNX21-206ENST00000462307 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
SNX21-206ENST00000462307 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
SNX21-206ENST00000462307 FBLN2P98095 1184 aa28.39■■■□□ 2.14
SNX21-206ENST00000462307 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
SNX21-206ENST00000462307 PBRM1Q86U86 1689 aa28.33■■■□□ 2.13
SNX21-206ENST00000462307 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
SNX21-206ENST00000462307 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
SNX21-206ENST00000462307 RIMBP3CA6NJZ7 1639 aa28.31■■■□□ 2.12
SNX21-206ENST00000462307 RIMBP3BA6NNM3 1639 aa28.31■■■□□ 2.12
SNX21-206ENST00000462307 RIMBP3Q9UFD9 1639 aa28.31■■■□□ 2.12
SNX21-206ENST00000462307 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
SNX21-206ENST00000462307 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
SNX21-206ENST00000462307 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
SNX21-206ENST00000462307 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
SNX21-206ENST00000462307 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
SNX21-206ENST00000462307 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
SNX21-206ENST00000462307 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
SNX21-206ENST00000462307 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
SNX21-206ENST00000462307 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
SNX21-206ENST00000462307 NUP160Q12769 1436 aa28■■■□□ 2.07
SNX21-206ENST00000462307 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
SNX21-206ENST00000462307 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
SNX21-206ENST00000462307 IGF1RP08069 1367 aa27.91■■■□□ 2.06
SNX21-206ENST00000462307 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
SNX21-206ENST00000462307 CUL7Q14999 1698 aa27.77■■■□□ 2.04
SNX21-206ENST00000462307 ERCC6L2Q5T890 1561 aa27.75■■■□□ 2.03
SNX21-206ENST00000462307 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
SNX21-206ENST00000462307 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms