RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 KIF3BO15066 747 aa12.41□□□□□ -0.42
SSR1-203ENST00000462112 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
SSR1-203ENST00000462112 ADAMTSL3P82987 1691 aa12.41□□□□□ -0.42
SSR1-203ENST00000462112 ABCC5O15440 1437 aa12.4□□□□□ -0.42
SSR1-203ENST00000462112 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
SSR1-203ENST00000462112 CHIC2Q9UKJ5 165 aa12.39□□□□□ -0.43
SSR1-203ENST00000462112 PLXNC1O60486 1568 aa12.39□□□□□ -0.43
SSR1-203ENST00000462112 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
SSR1-203ENST00000462112 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
SSR1-203ENST00000462112 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
SSR1-203ENST00000462112 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
SSR1-203ENST00000462112 PTPRMP28827 1452 aa12.38□□□□□ -0.43
SSR1-203ENST00000462112 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
SSR1-203ENST00000462112 ITGAEP38570 1179 aa12.37□□□□□ -0.43
SSR1-203ENST00000462112 KANK1Q14678 1352 aa12.37□□□□□ -0.43
SSR1-203ENST00000462112 RIMS1Q86UR5 1692 aaKnown RBP12.37□□□□□ -0.43
SSR1-203ENST00000462112 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
SSR1-203ENST00000462112 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
SSR1-203ENST00000462112 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
SSR1-203ENST00000462112 ERBINQ96RT1 1412 aa12.36□□□□□ -0.43
SSR1-203ENST00000462112 EIF2AK4Q9P2K8 1649 aaKnown RBP12.35□□□□□ -0.43
SSR1-203ENST00000462112 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
SSR1-203ENST00000462112 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
SSR1-203ENST00000462112 ROCK1Q13464 1354 aa12.33□□□□□ -0.44
SSR1-203ENST00000462112 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
SSR1-203ENST00000462112 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
SSR1-203ENST00000462112 MROH2AA6NES4 1674 aa12.31□□□□□ -0.44
SSR1-203ENST00000462112 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
SSR1-203ENST00000462112 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
SSR1-203ENST00000462112 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
SSR1-203ENST00000462112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.441e-10■■■□□ 14.9
SSR1-203ENST00000462112 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
SSR1-203ENST00000462112 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
SSR1-203ENST00000462112 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
SSR1-203ENST00000462112 NPATQ14207 1427 aa12.28□□□□□ -0.44
SSR1-203ENST00000462112 CEBPAP49715 358 aaPredicted RBP12.28□□□□□ -0.44
SSR1-203ENST00000462112 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
SSR1-203ENST00000462112 ZC3H13Q5T200 1668 aaKnown RBP12.28□□□□□ -0.44
SSR1-203ENST00000462112 UHRF1BP1Q6BDS2 1440 aa12.28□□□□□ -0.44
SSR1-203ENST00000462112 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.44
SSR1-203ENST00000462112 C3P01024 1663 aa12.25□□□□□ -0.45
SSR1-203ENST00000462112 POTEHQ6S545 545 aa12.24□□□□□ -0.45
SSR1-203ENST00000462112 PREX1Q8TCU6 1659 aa12.23□□□□□ -0.45
SSR1-203ENST00000462112 PRDM15P57071 1507 aaPredicted RBP12.22□□□□□ -0.45
SSR1-203ENST00000462112 PZPP20742 1482 aa12.22□□□□□ -0.45
SSR1-203ENST00000462112 PTPRKQ15262 1439 aa12.22□□□□□ -0.45
SSR1-203ENST00000462112 ABCC3O15438 1527 aa12.21□□□□□ -0.45
SSR1-203ENST00000462112 TNRQ92752 1358 aa12.21□□□□□ -0.45
SSR1-203ENST00000462112 DEPDC5O75140 1603 aa12.21□□□□□ -0.46
SSR1-203ENST00000462112 NUP155O75694 1391 aa12.2□□□□□ -0.46
SSR1-203ENST00000462112 TRIM52Q96A61 297 aa12.2□□□□□ -0.46
SSR1-203ENST00000462112 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
SSR1-203ENST00000462112 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
SSR1-203ENST00000462112 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
SSR1-203ENST00000462112 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
SSR1-203ENST00000462112 CAMSAP1Q5T5Y3 1602 aa12.19□□□□□ -0.46
SSR1-203ENST00000462112 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
SSR1-203ENST00000462112 CEP152O94986 1710 aa12.17□□□□□ -0.46
SSR1-203ENST00000462112 LMTK2Q8IWU2 1503 aa12.17□□□□□ -0.46
SSR1-203ENST00000462112 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
SSR1-203ENST00000462112 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
SSR1-203ENST00000462112 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
SSR1-203ENST00000462112 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
SSR1-203ENST00000462112 NAIPQ13075 1403 aa12.17□□□□□ -0.46
SSR1-203ENST00000462112 GCC2Q8IWJ2 1684 aa12.16□□□□□ -0.46
SSR1-203ENST00000462112 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
SSR1-203ENST00000462112 UNC13BO14795 1591 aa12.16□□□□□ -0.46
SSR1-203ENST00000462112 HSPA2P54652 639 aa12.15□□□□□ -0.46
SSR1-203ENST00000462112 SLC52A1Q9NWF4 448 aa12.15□□□□□ -0.46
SSR1-203ENST00000462112 A2ML1A8K2U0 1454 aa12.14□□□□□ -0.47
SSR1-203ENST00000462112 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
SSR1-203ENST00000462112 VWDEQ8N2E2 1590 aa12.14□□□□□ -0.47
SSR1-203ENST00000462112 TET3O43151 1660 aa12.14□□□□□ -0.47
SSR1-203ENST00000462112 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
SSR1-203ENST00000462112 PKD2Q13563 968 aa12.14□□□□□ -0.47
SSR1-203ENST00000462112 SPATA31D1Q6ZQQ2 1576 aa12.13□□□□□ -0.47
SSR1-203ENST00000462112 EFCAB6Q5THR3 1501 aa12.13□□□□□ -0.47
SSR1-203ENST00000462112 MYO3AQ8NEV4 1616 aa12.13□□□□□ -0.47
SSR1-203ENST00000462112 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
SSR1-203ENST00000462112 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
SSR1-203ENST00000462112 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
SSR1-203ENST00000462112 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
SSR1-203ENST00000462112 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
SSR1-203ENST00000462112 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
SSR1-203ENST00000462112 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
SSR1-203ENST00000462112 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
SSR1-203ENST00000462112 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
SSR1-203ENST00000462112 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
SSR1-203ENST00000462112 HRCP23327 699 aa12.09□□□□□ -0.47
SSR1-203ENST00000462112 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
SSR1-203ENST00000462112 NOS1P29475 1434 aa12.07□□□□□ -0.48
SSR1-203ENST00000462112 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
SSR1-203ENST00000462112 IDI1Q13907 227 aa12.06□□□□□ -0.48
SSR1-203ENST00000462112 PTPRTO14522 1441 aa12.05□□□□□ -0.48
SSR1-203ENST00000462112 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
SSR1-203ENST00000462112 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
SSR1-203ENST00000462112 E9PCH4 1651 aa12.04□□□□□ -0.48
SSR1-203ENST00000462112 KDM5AP29375 1690 aaKnown RBP12.04□□□□□ -0.48
SSR1-203ENST00000462112 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
SSR1-203ENST00000462112 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms