RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 NCOA1Q15788 1441 aa20.84■□□□□ 0.93
UBA3-205ENST00000461934 CFAP65Q6ZU64 1925 aaKnown RBP20.84■□□□□ 0.93
UBA3-205ENST00000461934 KDM5DQ9BY66 1539 aa20.83■□□□□ 0.93
UBA3-205ENST00000461934 FAM135AQ9P2D6 1515 aa20.83■□□□□ 0.93
UBA3-205ENST00000461934 PTPRKQ15262 1439 aa20.83■□□□□ 0.93
UBA3-205ENST00000461934 MAST1Q9Y2H9 1570 aa20.83■□□□□ 0.92
UBA3-205ENST00000461934 POLR1AO95602 1720 aaPredicted RBP20.83■□□□□ 0.92
UBA3-205ENST00000461934 CROCC2H7BZ55 1655 aa20.81■□□□□ 0.92
UBA3-205ENST00000461934 ZC3H13Q5T200 1668 aaKnown RBP20.81■□□□□ 0.92
UBA3-205ENST00000461934 MYOM3Q5VTT5 1437 aa20.8■□□□□ 0.92
UBA3-205ENST00000461934 EIF2AK4Q9P2K8 1649 aaKnown RBP20.8■□□□□ 0.92
UBA3-205ENST00000461934 MIA2Q96PC5 1412 aa20.78■□□□□ 0.92
UBA3-205ENST00000461934 KANK4Q5T7N3 995 aaPredicted RBP20.78■□□□□ 0.92
UBA3-205ENST00000461934 WASHC2CQ9Y4E1 1318 aa20.78■□□□□ 0.92
UBA3-205ENST00000461934 CEP152O94986 1710 aa20.77■□□□□ 0.92
UBA3-205ENST00000461934 DNMT1P26358 1616 aaKnown RBP20.77■□□□□ 0.92
UBA3-205ENST00000461934 RNF17Q9BXT8 1623 aaKnown RBP20.77■□□□□ 0.92
UBA3-205ENST00000461934 PTPN23Q9H3S7 1636 aa20.77■□□□□ 0.92
UBA3-205ENST00000461934 PLA2R1Q13018 1463 aa20.76■□□□□ 0.91
UBA3-205ENST00000461934 A2ML1A8K2U0 1454 aa20.75■□□□□ 0.91
UBA3-205ENST00000461934 PZPP20742 1482 aa20.74■□□□□ 0.91
UBA3-205ENST00000461934 NCKAP5LQ9HCH0 1330 aa20.74■□□□□ 0.91
UBA3-205ENST00000461934 PKD2Q13563 968 aa20.73■□□□□ 0.91
UBA3-205ENST00000461934 TNRQ92752 1358 aa20.72■□□□□ 0.91
UBA3-205ENST00000461934 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
UBA3-205ENST00000461934 DUOX2Q9NRD8 1548 aa20.7■□□□□ 0.9
UBA3-205ENST00000461934 TCOF1Q13428 1488 aaKnown RBP20.68■□□□□ 0.9
UBA3-205ENST00000461934 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
UBA3-205ENST00000461934 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
UBA3-205ENST00000461934 ABCC3O15438 1527 aa20.66■□□□□ 0.9
UBA3-205ENST00000461934 UGGT1Q9NYU2 1555 aa20.65■□□□□ 0.9
UBA3-205ENST00000461934 NLRP1Q9C000 1473 aa20.65■□□□□ 0.9
UBA3-205ENST00000461934 SHANK2Q9UPX8 1470 aa20.65■□□□□ 0.9
UBA3-205ENST00000461934 MROH1Q8NDA8 1641 aa20.64■□□□□ 0.89
UBA3-205ENST00000461934 FGD6Q6ZV73 1430 aa20.61■□□□□ 0.89
UBA3-205ENST00000461934 ZNF335Q9H4Z2 1342 aaPredicted RBP20.61■□□□□ 0.89
UBA3-205ENST00000461934 DAPK1P53355 1430 aa20.61■□□□□ 0.89
UBA3-205ENST00000461934 KIF15Q9NS87 1388 aa20.6■□□□□ 0.89
UBA3-205ENST00000461934 SPATA31D1Q6ZQQ2 1576 aa20.6■□□□□ 0.89
UBA3-205ENST00000461934 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
UBA3-205ENST00000461934 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
UBA3-205ENST00000461934 IQGAP1P46940 1657 aa20.59■□□□□ 0.89
UBA3-205ENST00000461934 DEPDC5O75140 1603 aa20.59■□□□□ 0.89
UBA3-205ENST00000461934 ABCC5O15440 1437 aa20.59■□□□□ 0.89
UBA3-205ENST00000461934 ERBINQ96RT1 1412 aa20.59■□□□□ 0.89
UBA3-205ENST00000461934 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
UBA3-205ENST00000461934 RRP7BPQ9NSQ0 103 aa20.58■□□□□ 0.89
UBA3-205ENST00000461934 UBR1Q8IWV7 1749 aa20.58■□□□□ 0.88
UBA3-205ENST00000461934 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
UBA3-205ENST00000461934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.57■□□□□ 0.88
UBA3-205ENST00000461934 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
UBA3-205ENST00000461934 KANK1Q14678 1352 aa20.55■□□□□ 0.88
UBA3-205ENST00000461934 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
UBA3-205ENST00000461934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
UBA3-205ENST00000461934 CHIC2Q9UKJ5 165 aa20.53■□□□□ 0.88
UBA3-205ENST00000461934 CPS1P31327 1500 aa20.53■□□□□ 0.88
UBA3-205ENST00000461934 UBAP1LF5GYI3 381 aa20.51■□□□□ 0.87
UBA3-205ENST00000461934 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
UBA3-205ENST00000461934 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
UBA3-205ENST00000461934 PIK3C2BO00750 1634 aa20.48■□□□□ 0.87
UBA3-205ENST00000461934 MED14O60244 1454 aa20.48■□□□□ 0.87
UBA3-205ENST00000461934 MSH5O43196 834 aa20.47■□□□□ 0.87
UBA3-205ENST00000461934 ARHGAP31Q2M1Z3 1444 aa20.46■□□□□ 0.87
UBA3-205ENST00000461934 VWDEQ8N2E2 1590 aa20.46■□□□□ 0.87
UBA3-205ENST00000461934 KDM5AP29375 1690 aaKnown RBP20.45■□□□□ 0.86
UBA3-205ENST00000461934 STRCP1A6NGW2 1772 aa20.44■□□□□ 0.86
UBA3-205ENST00000461934 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
UBA3-205ENST00000461934 DISP3Q9P2K9 1392 aa20.44■□□□□ 0.86
UBA3-205ENST00000461934 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
UBA3-205ENST00000461934 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
UBA3-205ENST00000461934 SYNMO15061 1565 aa20.42■□□□□ 0.86
UBA3-205ENST00000461934 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
UBA3-205ENST00000461934 MYO5BQ9ULV0 1848 aa20.41■□□□□ 0.86
UBA3-205ENST00000461934 SCAF11Q99590 1463 aaKnown RBP20.41■□□□□ 0.86
UBA3-205ENST00000461934 LMTK2Q8IWU2 1503 aa20.41■□□□□ 0.86
UBA3-205ENST00000461934 TOM1O60784 492 aa20.4■□□□□ 0.86
UBA3-205ENST00000461934 EFCAB6Q5THR3 1501 aa20.4■□□□□ 0.86
UBA3-205ENST00000461934 SLIT1O75093 1534 aa20.39■□□□□ 0.85
UBA3-205ENST00000461934 EID1Q9Y6B2 187 aa20.39■□□□□ 0.85
UBA3-205ENST00000461934 TET3O43151 1660 aa20.38■□□□□ 0.85
UBA3-205ENST00000461934 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
UBA3-205ENST00000461934 PIP4K2BP78356 416 aa20.36■□□□□ 0.85
UBA3-205ENST00000461934 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
UBA3-205ENST00000461934 ARHGAP23Q9P227 1491 aa20.35■□□□□ 0.85
UBA3-205ENST00000461934 UNC13BO14795 1591 aa20.34■□□□□ 0.85
UBA3-205ENST00000461934 XIRP1Q702N8 1843 aaKnown RBP20.33■□□□□ 0.85
UBA3-205ENST00000461934 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
UBA3-205ENST00000461934 RPRD2Q5VT52 1461 aaKnown RBP20.31■□□□□ 0.84
UBA3-205ENST00000461934 LTKP29376 864 aa20.3■□□□□ 0.84
UBA3-205ENST00000461934 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
UBA3-205ENST00000461934 E9PCH4 1651 aa20.29■□□□□ 0.84
UBA3-205ENST00000461934 LRRC7Q96NW7 1537 aa20.29■□□□□ 0.84
UBA3-205ENST00000461934 IDI1Q13907 227 aa20.28■□□□□ 0.84
UBA3-205ENST00000461934 NOS1P29475 1434 aa20.27■□□□□ 0.84
UBA3-205ENST00000461934 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.84
UBA3-205ENST00000461934 ITGAEP38570 1179 aa20.26■□□□□ 0.83
UBA3-205ENST00000461934 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
UBA3-205ENST00000461934 BCANQ96GW7 911 aa20.25■□□□□ 0.83
UBA3-205ENST00000461934 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
UBA3-205ENST00000461934 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms