RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 LTBP4Q8N2S1 1624 aa23.85■■□□□ 1.41
COL16A1-206ENST00000461217 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
COL16A1-206ENST00000461217 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
COL16A1-206ENST00000461217 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
COL16A1-206ENST00000461217 A2ML1A8K2U0 1454 aa23.82■■□□□ 1.4
COL16A1-206ENST00000461217 PKD2Q13563 968 aa23.82■■□□□ 1.4
COL16A1-206ENST00000461217 MYOM3Q5VTT5 1437 aa23.81■■□□□ 1.4
COL16A1-206ENST00000461217 PZPP20742 1482 aa23.81■■□□□ 1.4
COL16A1-206ENST00000461217 TNRQ92752 1358 aa23.8■■□□□ 1.4
COL16A1-206ENST00000461217 MAST1Q9Y2H9 1570 aa23.8■■□□□ 1.4
COL16A1-206ENST00000461217 TCOF1Q13428 1488 aaKnown RBP23.8■■□□□ 1.4
COL16A1-206ENST00000461217 MIA2Q96PC5 1412 aa23.79■■□□□ 1.4
COL16A1-206ENST00000461217 FBXO31Q5XUX0 539 aaPredicted RBP23.79■■□□□ 1.4
COL16A1-206ENST00000461217 DNMT1P26358 1616 aaKnown RBP23.79■■□□□ 1.4
COL16A1-206ENST00000461217 IQSEC2Q5JU85 1478 aa23.77■■□□□ 1.4
COL16A1-206ENST00000461217 APLP2Q06481 763 aa23.77■■□□□ 1.4
COL16A1-206ENST00000461217 ZNF335Q9H4Z2 1342 aaPredicted RBP23.77■■□□□ 1.4
COL16A1-206ENST00000461217 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
COL16A1-206ENST00000461217 EIF2AK4Q9P2K8 1649 aaKnown RBP23.73■■□□□ 1.39
COL16A1-206ENST00000461217 ZC3H13Q5T200 1668 aaKnown RBP23.72■■□□□ 1.39
COL16A1-206ENST00000461217 POLR1AO95602 1720 aaPredicted RBP23.72■■□□□ 1.39
COL16A1-206ENST00000461217 ABCC3O15438 1527 aa23.69■■□□□ 1.38
COL16A1-206ENST00000461217 NLRP1Q9C000 1473 aa23.69■■□□□ 1.38
COL16A1-206ENST00000461217 PTPN23Q9H3S7 1636 aa23.67■■□□□ 1.38
COL16A1-206ENST00000461217 UGGT1Q9NYU2 1555 aa23.67■■□□□ 1.38
COL16A1-206ENST00000461217 DUOX2Q9NRD8 1548 aa23.67■■□□□ 1.38
COL16A1-206ENST00000461217 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
COL16A1-206ENST00000461217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.66■■□□□ 1.38
COL16A1-206ENST00000461217 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
COL16A1-206ENST00000461217 CEP152O94986 1710 aa23.64■■□□□ 1.38
COL16A1-206ENST00000461217 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.38
COL16A1-206ENST00000461217 THEMISQ8N1K5 641 aaPredicted RBP23.64■■□□□ 1.37
COL16A1-206ENST00000461217 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
COL16A1-206ENST00000461217 UBAP1LF5GYI3 381 aa23.63■■□□□ 1.37
COL16A1-206ENST00000461217 ANKLE2Q86XL3 938 aa23.63■■□□□ 1.37
COL16A1-206ENST00000461217 KIF15Q9NS87 1388 aa23.63■■□□□ 1.37
COL16A1-206ENST00000461217 SPATA31D1Q6ZQQ2 1576 aa23.62■■□□□ 1.37
COL16A1-206ENST00000461217 DISP3Q9P2K9 1392 aa23.62■■□□□ 1.37
COL16A1-206ENST00000461217 ABCC5O15440 1437 aa23.61■■□□□ 1.37
COL16A1-206ENST00000461217 ERVK-7P63135 1459 aa23.61■■□□□ 1.37
COL16A1-206ENST00000461217 DAPK1P53355 1430 aa23.59■■□□□ 1.37
COL16A1-206ENST00000461217 FGD6Q6ZV73 1430 aa23.59■■□□□ 1.37
COL16A1-206ENST00000461217 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
COL16A1-206ENST00000461217 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
COL16A1-206ENST00000461217 DEPDC5O75140 1603 aa23.57■■□□□ 1.36
COL16A1-206ENST00000461217 PRDM15P57071 1507 aaPredicted RBP23.57■■□□□ 1.36
COL16A1-206ENST00000461217 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
COL16A1-206ENST00000461217 CPS1P31327 1500 aa23.56■■□□□ 1.36
COL16A1-206ENST00000461217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
COL16A1-206ENST00000461217 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
COL16A1-206ENST00000461217 MED14O60244 1454 aa23.53■■□□□ 1.36
COL16A1-206ENST00000461217 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
COL16A1-206ENST00000461217 KANK1Q14678 1352 aa23.52■■□□□ 1.36
COL16A1-206ENST00000461217 VWDEQ8N2E2 1590 aa23.51■■□□□ 1.35
COL16A1-206ENST00000461217 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
COL16A1-206ENST00000461217 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
COL16A1-206ENST00000461217 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
COL16A1-206ENST00000461217 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
COL16A1-206ENST00000461217 ARHGAP31Q2M1Z3 1444 aa23.48■■□□□ 1.35
COL16A1-206ENST00000461217 PIP4K2BP78356 416 aa23.46■■□□□ 1.35
COL16A1-206ENST00000461217 TOM1O60784 492 aa23.45■■□□□ 1.34
COL16A1-206ENST00000461217 FAM50AQ14320 339 aaKnown RBP23.44■■□□□ 1.34
COL16A1-206ENST00000461217 SCAF11Q99590 1463 aaKnown RBP23.43■■□□□ 1.34
COL16A1-206ENST00000461217 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
COL16A1-206ENST00000461217 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
COL16A1-206ENST00000461217 STAG3Q9UJ98 1225 aa23.41■■□□□ 1.34
COL16A1-206ENST00000461217 SLIT1O75093 1534 aa23.39■■□□□ 1.34
COL16A1-206ENST00000461217 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.34
COL16A1-206ENST00000461217 ADGRL2O95490 1459 aa23.39■■□□□ 1.34
COL16A1-206ENST00000461217 TXNDC2Q86VQ3 553 aa23.39■■□□□ 1.33
COL16A1-206ENST00000461217 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
COL16A1-206ENST00000461217 EID1Q9Y6B2 187 aa23.38■■□□□ 1.33
COL16A1-206ENST00000461217 SYNMO15061 1565 aa23.38■■□□□ 1.33
COL16A1-206ENST00000461217 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
COL16A1-206ENST00000461217 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
COL16A1-206ENST00000461217 LTKP29376 864 aa23.35■■□□□ 1.33
COL16A1-206ENST00000461217 HSPA1LP34931 641 aa23.35■■□□□ 1.33
COL16A1-206ENST00000461217 LRRC7Q96NW7 1537 aa23.34■■□□□ 1.33
COL16A1-206ENST00000461217 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.32
COL16A1-206ENST00000461217 TMEM2Q9UHN6 1383 aa23.32■■□□□ 1.32
COL16A1-206ENST00000461217 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
COL16A1-206ENST00000461217 IDI1Q13907 227 aa23.3■■□□□ 1.32
COL16A1-206ENST00000461217 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
COL16A1-206ENST00000461217 NOS1P29475 1434 aa23.28■■□□□ 1.32
COL16A1-206ENST00000461217 SOCS7O14512 581 aa23.28■■□□□ 1.32
COL16A1-206ENST00000461217 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
COL16A1-206ENST00000461217 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
COL16A1-206ENST00000461217 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
COL16A1-206ENST00000461217 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
COL16A1-206ENST00000461217 TET3O43151 1660 aa23.24■■□□□ 1.31
COL16A1-206ENST00000461217 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
COL16A1-206ENST00000461217 UNC13BO14795 1591 aa23.22■■□□□ 1.31
COL16A1-206ENST00000461217 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
COL16A1-206ENST00000461217 BCANQ96GW7 911 aa23.2■■□□□ 1.3
COL16A1-206ENST00000461217 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
COL16A1-206ENST00000461217 XIRP1Q702N8 1843 aaKnown RBP23.18■■□□□ 1.3
COL16A1-206ENST00000461217 ITGAEP38570 1179 aa23.17■■□□□ 1.3
COL16A1-206ENST00000461217 ROCK1Q13464 1354 aa23.16■■□□□ 1.3
COL16A1-206ENST00000461217 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
COL16A1-206ENST00000461217 PPP1R15AO75807 674 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms