RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
PHF1-206ENST00000459809 RRP7BPQ9NSQ0 103 aa20.26■□□□□ 0.83
PHF1-206ENST00000459809 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
PHF1-206ENST00000459809 PKD2Q13563 968 aa20.25■□□□□ 0.83
PHF1-206ENST00000459809 KDM5DQ9BY66 1539 aa20.25■□□□□ 0.83
PHF1-206ENST00000459809 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
PHF1-206ENST00000459809 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
PHF1-206ENST00000459809 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
PHF1-206ENST00000459809 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
PHF1-206ENST00000459809 DUOX2Q9NRD8 1548 aa20.23■□□□□ 0.83
PHF1-206ENST00000459809 DAPK1P53355 1430 aa20.23■□□□□ 0.83
PHF1-206ENST00000459809 PZPP20742 1482 aa20.23■□□□□ 0.83
PHF1-206ENST00000459809 TNRQ92752 1358 aa20.22■□□□□ 0.83
PHF1-206ENST00000459809 STRCQ7RTU9 1775 aa20.21■□□□□ 0.83
PHF1-206ENST00000459809 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
PHF1-206ENST00000459809 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
PHF1-206ENST00000459809 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
PHF1-206ENST00000459809 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
PHF1-206ENST00000459809 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
PHF1-206ENST00000459809 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
PHF1-206ENST00000459809 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
PHF1-206ENST00000459809 CAMSAP1Q5T5Y3 1602 aa20.18■□□□□ 0.82
PHF1-206ENST00000459809 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
PHF1-206ENST00000459809 EIF2AK4Q9P2K8 1649 aaKnown RBP20.17■□□□□ 0.82
PHF1-206ENST00000459809 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
PHF1-206ENST00000459809 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
PHF1-206ENST00000459809 DNMT1P26358 1616 aaKnown RBP20.15■□□□□ 0.82
PHF1-206ENST00000459809 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
PHF1-206ENST00000459809 ABCC3O15438 1527 aa20.14■□□□□ 0.81
PHF1-206ENST00000459809 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
PHF1-206ENST00000459809 KANK1Q14678 1352 aa20.13■□□□□ 0.81
PHF1-206ENST00000459809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.816e-7■■■□□ 15
PHF1-206ENST00000459809 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
PHF1-206ENST00000459809 ZNF142P52746 1687 aaPredicted RBP20.11■□□□□ 0.81
PHF1-206ENST00000459809 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
PHF1-206ENST00000459809 ZC3H13Q5T200 1668 aaKnown RBP20.09■□□□□ 0.81
PHF1-206ENST00000459809 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.81
PHF1-206ENST00000459809 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
PHF1-206ENST00000459809 MROH1Q8NDA8 1641 aa20.07■□□□□ 0.8
PHF1-206ENST00000459809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.06■□□□□ 0.87e-7■■■■■ 38.4
PHF1-206ENST00000459809 ERVK-7P63135 1459 aa20.05■□□□□ 0.8
PHF1-206ENST00000459809 SPATA31D1Q6ZQQ2 1576 aa20.05■□□□□ 0.8
PHF1-206ENST00000459809 PRDM15P57071 1507 aaPredicted RBP20.05■□□□□ 0.8
PHF1-206ENST00000459809 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
PHF1-206ENST00000459809 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
PHF1-206ENST00000459809 ZNF335Q9H4Z2 1342 aaPredicted RBP20.02■□□□□ 0.8
PHF1-206ENST00000459809 LTBP4Q8N2S1 1624 aa20.02■□□□□ 0.8
PHF1-206ENST00000459809 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
PHF1-206ENST00000459809 ROCK1Q13464 1354 aa20.01■□□□□ 0.79
PHF1-206ENST00000459809 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
PHF1-206ENST00000459809 LMTK2Q8IWU2 1503 aa20■□□□□ 0.79
PHF1-206ENST00000459809 DEPDC5O75140 1603 aa19.98■□□□□ 0.79
PHF1-206ENST00000459809 MED14O60244 1454 aa19.98■□□□□ 0.79
PHF1-206ENST00000459809 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
PHF1-206ENST00000459809 VWDEQ8N2E2 1590 aa19.96■□□□□ 0.79
PHF1-206ENST00000459809 IDI1Q13907 227 aa19.96■□□□□ 0.79
PHF1-206ENST00000459809 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
PHF1-206ENST00000459809 EID1Q9Y6B2 187 aa19.96■□□□□ 0.79
PHF1-206ENST00000459809 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
PHF1-206ENST00000459809 CEP152O94986 1710 aa19.94■□□□□ 0.78
PHF1-206ENST00000459809 ITGAEP38570 1179 aa19.94■□□□□ 0.78
PHF1-206ENST00000459809 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
PHF1-206ENST00000459809 LTKP29376 864 aa19.91■□□□□ 0.78
PHF1-206ENST00000459809 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
PHF1-206ENST00000459809 NOS1P29475 1434 aa19.9■□□□□ 0.78
PHF1-206ENST00000459809 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
PHF1-206ENST00000459809 ARHGAP23Q9P227 1491 aa19.88■□□□□ 0.77
PHF1-206ENST00000459809 TMEM2Q9UHN6 1383 aa19.88■□□□□ 0.77
PHF1-206ENST00000459809 UBAP1LF5GYI3 381 aa19.88■□□□□ 0.77
PHF1-206ENST00000459809 SLIT1O75093 1534 aa19.87■□□□□ 0.77
PHF1-206ENST00000459809 CPS1P31327 1500 aa19.87■□□□□ 0.77
PHF1-206ENST00000459809 EFCAB6Q5THR3 1501 aa19.87■□□□□ 0.77
PHF1-206ENST00000459809 POLR1AO95602 1720 aaPredicted RBP19.87■□□□□ 0.77
PHF1-206ENST00000459809 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
PHF1-206ENST00000459809 HDGFP51858 240 aaKnown RBP19.86■□□□□ 0.77
PHF1-206ENST00000459809 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
PHF1-206ENST00000459809 NUP155O75694 1391 aa19.85■□□□□ 0.77
PHF1-206ENST00000459809 UBR1Q8IWV7 1749 aa19.85■□□□□ 0.77
PHF1-206ENST00000459809 TOM1O60784 492 aa19.84■□□□□ 0.77
PHF1-206ENST00000459809 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
PHF1-206ENST00000459809 KDM5AP29375 1690 aaKnown RBP19.8■□□□□ 0.76
PHF1-206ENST00000459809 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
PHF1-206ENST00000459809 PIK3C2BO00750 1634 aa19.8■□□□□ 0.76
PHF1-206ENST00000459809 UNC13BO14795 1591 aa19.79■□□□□ 0.76
PHF1-206ENST00000459809 SYNMO15061 1565 aa19.79■□□□□ 0.76
PHF1-206ENST00000459809 TET3O43151 1660 aa19.78■□□□□ 0.76
PHF1-206ENST00000459809 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
PHF1-206ENST00000459809 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
PHF1-206ENST00000459809 KCNA6P17658 529 aa19.74■□□□□ 0.75
PHF1-206ENST00000459809 BCANQ96GW7 911 aa19.74■□□□□ 0.75
PHF1-206ENST00000459809 ADGRB3O60242 1522 aa19.73■□□□□ 0.75
PHF1-206ENST00000459809 SLC26A8Q96RN1 970 aa19.73■□□□□ 0.75
PHF1-206ENST00000459809 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
PHF1-206ENST00000459809 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
PHF1-206ENST00000459809 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
PHF1-206ENST00000459809 NAIPQ13075 1403 aa19.72■□□□□ 0.75
PHF1-206ENST00000459809 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
PHF1-206ENST00000459809 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
PHF1-206ENST00000459809 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
PHF1-206ENST00000459809 RIMS2Q9UQ26 1411 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms