RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 FGD6Q6ZV73 1430 aa19.39■□□□□ 0.69
VEGFA-210ENST00000457104 EIF2AK4Q9P2K8 1649 aaKnown RBP19.39■□□□□ 0.69
VEGFA-210ENST00000457104 TCOF1Q13428 1488 aaKnown RBP19.38■□□□□ 0.69
VEGFA-210ENST00000457104 DNMT1P26358 1616 aaKnown RBP19.37■□□□□ 0.69
VEGFA-210ENST00000457104 ABCC5O15440 1437 aa19.37■□□□□ 0.69
VEGFA-210ENST00000457104 CAMSAP1Q5T5Y3 1602 aa19.36■□□□□ 0.69
VEGFA-210ENST00000457104 CEP170BQ9Y4F5 1589 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-210ENST00000457104 NCOA1Q15788 1441 aa19.36■□□□□ 0.69
VEGFA-210ENST00000457104 MROH1Q8NDA8 1641 aa19.36■□□□□ 0.69
VEGFA-210ENST00000457104 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
VEGFA-210ENST00000457104 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
VEGFA-210ENST00000457104 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
VEGFA-210ENST00000457104 DUOX2Q9NRD8 1548 aa19.34■□□□□ 0.69
VEGFA-210ENST00000457104 PZPP20742 1482 aa19.34■□□□□ 0.69
VEGFA-210ENST00000457104 PTPRTO14522 1441 aa19.34■□□□□ 0.69
VEGFA-210ENST00000457104 DAPK1P53355 1430 aa19.34■□□□□ 0.69
VEGFA-210ENST00000457104 WASHC2CQ9Y4E1 1318 aa19.33■□□□□ 0.69
VEGFA-210ENST00000457104 ZC3H13Q5T200 1668 aaKnown RBP19.33■□□□□ 0.68
VEGFA-210ENST00000457104 FBXO31Q5XUX0 539 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-210ENST00000457104 CEP152O94986 1710 aa19.31■□□□□ 0.68
VEGFA-210ENST00000457104 ABCC3O15438 1527 aa19.3■□□□□ 0.68
VEGFA-210ENST00000457104 CFAP65Q6ZU64 1925 aaKnown RBP19.3■□□□□ 0.68
VEGFA-210ENST00000457104 A2ML1A8K2U0 1454 aa19.29■□□□□ 0.68
VEGFA-210ENST00000457104 CERKQ8TCT0 537 aa19.29■□□□□ 0.68
VEGFA-210ENST00000457104 KIF15Q9NS87 1388 aa19.29■□□□□ 0.68
VEGFA-210ENST00000457104 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
VEGFA-210ENST00000457104 TNRQ92752 1358 aa19.28■□□□□ 0.68
VEGFA-210ENST00000457104 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
VEGFA-210ENST00000457104 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
VEGFA-210ENST00000457104 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
VEGFA-210ENST00000457104 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
VEGFA-210ENST00000457104 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-210ENST00000457104 LTBP4Q8N2S1 1624 aa19.24■□□□□ 0.67
VEGFA-210ENST00000457104 SPATA31D1Q6ZQQ2 1576 aa19.23■□□□□ 0.67
VEGFA-210ENST00000457104 POLR1AO95602 1720 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-210ENST00000457104 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
VEGFA-210ENST00000457104 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
VEGFA-210ENST00000457104 PKD2Q13563 968 aa19.21■□□□□ 0.67
VEGFA-210ENST00000457104 ADGRL2O95490 1459 aa19.21■□□□□ 0.67
VEGFA-210ENST00000457104 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
VEGFA-210ENST00000457104 ERVK-7P63135 1459 aa19.2■□□□□ 0.66
VEGFA-210ENST00000457104 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
VEGFA-210ENST00000457104 NEURL4Q96JN8 1562 aa19.18■□□□□ 0.66
VEGFA-210ENST00000457104 UGGT1Q9NYU2 1555 aa19.18■□□□□ 0.66
VEGFA-210ENST00000457104 VWDEQ8N2E2 1590 aa19.17■□□□□ 0.66
VEGFA-210ENST00000457104 ARHGAP31Q2M1Z3 1444 aa19.17■□□□□ 0.66
VEGFA-210ENST00000457104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.661e-14■■■□□ 16.5
VEGFA-210ENST00000457104 UBR1Q8IWV7 1749 aa19.14■□□□□ 0.66
VEGFA-210ENST00000457104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.653e-7■■■□□ 14.6
VEGFA-210ENST00000457104 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
VEGFA-210ENST00000457104 ZNF335Q9H4Z2 1342 aaPredicted RBP19.13■□□□□ 0.65
VEGFA-210ENST00000457104 LMTK2Q8IWU2 1503 aa19.13■□□□□ 0.65
VEGFA-210ENST00000457104 KANK1Q14678 1352 aa19.11■□□□□ 0.65
VEGFA-210ENST00000457104 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
VEGFA-210ENST00000457104 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
VEGFA-210ENST00000457104 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
VEGFA-210ENST00000457104 ANKLE2Q86XL3 938 aa19.09■□□□□ 0.65
VEGFA-210ENST00000457104 MED14O60244 1454 aa19.09■□□□□ 0.65
VEGFA-210ENST00000457104 PIK3C2BO00750 1634 aa19.07■□□□□ 0.64
VEGFA-210ENST00000457104 EFCAB6Q5THR3 1501 aa19.07■□□□□ 0.64
VEGFA-210ENST00000457104 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
VEGFA-210ENST00000457104 UNC13BO14795 1591 aa19.05■□□□□ 0.64
VEGFA-210ENST00000457104 SYNMO15061 1565 aa19.05■□□□□ 0.64
VEGFA-210ENST00000457104 ROCK1Q13464 1354 aa19.05■□□□□ 0.64
VEGFA-210ENST00000457104 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
VEGFA-210ENST00000457104 KDM5AP29375 1690 aaKnown RBP19.04■□□□□ 0.64
VEGFA-210ENST00000457104 TET3O43151 1660 aa19.03■□□□□ 0.64
VEGFA-210ENST00000457104 SLIT1O75093 1534 aa19.03■□□□□ 0.64
VEGFA-210ENST00000457104 ARHGAP23Q9P227 1491 aa19.03■□□□□ 0.64
VEGFA-210ENST00000457104 GCC2Q8IWJ2 1684 aa19.02■□□□□ 0.64
VEGFA-210ENST00000457104 NOS1P29475 1434 aa19.02■□□□□ 0.64
VEGFA-210ENST00000457104 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
VEGFA-210ENST00000457104 IDI1Q13907 227 aa18.99■□□□□ 0.63
VEGFA-210ENST00000457104 RPRD2Q5VT52 1461 aaKnown RBP18.98■□□□□ 0.63
VEGFA-210ENST00000457104 SCAF11Q99590 1463 aaKnown RBP18.98■□□□□ 0.63
VEGFA-210ENST00000457104 MYO5BQ9ULV0 1848 aa18.98■□□□□ 0.63
VEGFA-210ENST00000457104 LTKP29376 864 aa18.98■□□□□ 0.63
VEGFA-210ENST00000457104 ITGAEP38570 1179 aa18.98■□□□□ 0.63
VEGFA-210ENST00000457104 CPS1P31327 1500 aa18.98■□□□□ 0.63
VEGFA-210ENST00000457104 E9PCH4 1651 aa18.98■□□□□ 0.63
VEGFA-210ENST00000457104 IQGAP3Q86VI3 1631 aa18.97■□□□□ 0.63
VEGFA-210ENST00000457104 RRBP1Q9P2E9 1410 aaKnown RBP18.96■□□□□ 0.63
VEGFA-210ENST00000457104 TXNDC2Q86VQ3 553 aa18.95■□□□□ 0.62
VEGFA-210ENST00000457104 TMEM2Q9UHN6 1383 aa18.94■□□□□ 0.62
VEGFA-210ENST00000457104 ADGRB3O60242 1522 aa18.94■□□□□ 0.62
VEGFA-210ENST00000457104 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
VEGFA-210ENST00000457104 UBAP1LF5GYI3 381 aa18.91■□□□□ 0.62
VEGFA-210ENST00000457104 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
VEGFA-210ENST00000457104 TMEM131LA2VDJ0 1609 aa18.9■□□□□ 0.62
VEGFA-210ENST00000457104 EID1Q9Y6B2 187 aa18.9■□□□□ 0.62
VEGFA-210ENST00000457104 XIRP1Q702N8 1843 aaKnown RBP18.88■□□□□ 0.61
VEGFA-210ENST00000457104 NUP155O75694 1391 aa18.88■□□□□ 0.61
VEGFA-210ENST00000457104 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
VEGFA-210ENST00000457104 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
VEGFA-210ENST00000457104 ZFYVE9O95405 1425 aa18.84■□□□□ 0.61
VEGFA-210ENST00000457104 NAIPQ13075 1403 aa18.84■□□□□ 0.61
VEGFA-210ENST00000457104 SPHKAPQ2M3C7 1700 aa18.83■□□□□ 0.6
VEGFA-210ENST00000457104 TOM1O60784 492 aa18.8■□□□□ 0.6
VEGFA-210ENST00000457104 SLC26A8Q96RN1 970 aa18.79■□□□□ 0.6
VEGFA-210ENST00000457104 RIMS2Q9UQ26 1411 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms