RNA–Protein interactions for RNA: ENST00000454108.5

CALD1-212, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-212ENST00000454108 A2ML1A8K2U0 1454 aa24.98■■□□□ 1.59
CALD1-212ENST00000454108 KIF3BO15066 747 aa24.98■■□□□ 1.59
CALD1-212ENST00000454108 PKD2Q13563 968 aa24.97■■□□□ 1.59
CALD1-212ENST00000454108 POLR1AO95602 1720 aaPredicted RBP24.96■■□□□ 1.59
CALD1-212ENST00000454108 PZPP20742 1482 aa24.96■■□□□ 1.59
CALD1-212ENST00000454108 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
CALD1-212ENST00000454108 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
CALD1-212ENST00000454108 TNRQ92752 1358 aa24.93■■□□□ 1.58
CALD1-212ENST00000454108 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
CALD1-212ENST00000454108 TSPY4P0CV99 314 aa24.92■■□□□ 1.58
CALD1-212ENST00000454108 TSPY10P0CW01 314 aa24.92■■□□□ 1.58
CALD1-212ENST00000454108 ZNF335Q9H4Z2 1342 aaPredicted RBP24.91■■□□□ 1.58
CALD1-212ENST00000454108 RNF17Q9BXT8 1623 aaKnown RBP24.91■■□□□ 1.58
CALD1-212ENST00000454108 WASHC2CQ9Y4E1 1318 aa24.9■■□□□ 1.58
CALD1-212ENST00000454108 ZC3H13Q5T200 1668 aaKnown RBP24.9■■□□□ 1.58
CALD1-212ENST00000454108 EIF2AK4Q9P2K8 1649 aaKnown RBP24.89■■□□□ 1.57
CALD1-212ENST00000454108 FBXO31Q5XUX0 539 aaPredicted RBP24.87■■□□□ 1.57
CALD1-212ENST00000454108 MYOM3Q5VTT5 1437 aa24.86■■□□□ 1.57
CALD1-212ENST00000454108 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
CALD1-212ENST00000454108 NEURL4Q96JN8 1562 aa24.85■■□□□ 1.57
CALD1-212ENST00000454108 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
CALD1-212ENST00000454108 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
CALD1-212ENST00000454108 DISP3Q9P2K9 1392 aa24.82■■□□□ 1.56
CALD1-212ENST00000454108 ABCC3O15438 1527 aa24.82■■□□□ 1.56
CALD1-212ENST00000454108 SPATA31D1Q6ZQQ2 1576 aa24.82■■□□□ 1.56
CALD1-212ENST00000454108 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
CALD1-212ENST00000454108 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
CALD1-212ENST00000454108 CEP152O94986 1710 aa24.81■■□□□ 1.56
CALD1-212ENST00000454108 MROH1Q8NDA8 1641 aa24.79■■□□□ 1.56
CALD1-212ENST00000454108 DUOX2Q9NRD8 1548 aa24.77■■□□□ 1.56
CALD1-212ENST00000454108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.77■■□□□ 1.56
CALD1-212ENST00000454108 DEPDC5O75140 1603 aa24.76■■□□□ 1.55
CALD1-212ENST00000454108 UBAP1LF5GYI3 381 aa24.76■■□□□ 1.55
CALD1-212ENST00000454108 CPS1P31327 1500 aa24.75■■□□□ 1.55
CALD1-212ENST00000454108 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
CALD1-212ENST00000454108 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
CALD1-212ENST00000454108 SHANK2Q9UPX8 1470 aa24.74■■□□□ 1.55
CALD1-212ENST00000454108 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
CALD1-212ENST00000454108 ANKLE2Q86XL3 938 aa24.73■■□□□ 1.55
CALD1-212ENST00000454108 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
CALD1-212ENST00000454108 IQGAP1P46940 1657 aa24.72■■□□□ 1.55
CALD1-212ENST00000454108 PRDM15P57071 1507 aaPredicted RBP24.71■■□□□ 1.55
CALD1-212ENST00000454108 MED14O60244 1454 aa24.7■■□□□ 1.55
CALD1-212ENST00000454108 VWDEQ8N2E2 1590 aa24.7■■□□□ 1.54
CALD1-212ENST00000454108 NPHP4O75161 1426 aaPredicted RBP24.69■■□□□ 1.54
CALD1-212ENST00000454108 APLP2Q06481 763 aa24.69■■□□□ 1.54
CALD1-212ENST00000454108 KIF15Q9NS87 1388 aa24.68■■□□□ 1.54
CALD1-212ENST00000454108 UBR1Q8IWV7 1749 aa24.68■■□□□ 1.54
CALD1-212ENST00000454108 ERBINQ96RT1 1412 aa24.68■■□□□ 1.54
CALD1-212ENST00000454108 ABCC5O15440 1437 aa24.67■■□□□ 1.54
CALD1-212ENST00000454108 ILDR2Q71H61 639 aa24.65■■□□□ 1.54
CALD1-212ENST00000454108 DAPK1P53355 1430 aa24.64■■□□□ 1.54
CALD1-212ENST00000454108 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
CALD1-212ENST00000454108 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
CALD1-212ENST00000454108 ARHGAP31Q2M1Z3 1444 aa24.6■■□□□ 1.53
CALD1-212ENST00000454108 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
CALD1-212ENST00000454108 STRCP1A6NGW2 1772 aa24.59■■□□□ 1.53
CALD1-212ENST00000454108 SYNMO15061 1565 aa24.59■■□□□ 1.53
CALD1-212ENST00000454108 TOM1O60784 492 aa24.57■■□□□ 1.52
CALD1-212ENST00000454108 PIP4K2BP78356 416 aa24.56■■□□□ 1.52
CALD1-212ENST00000454108 SCAF11Q99590 1463 aaKnown RBP24.56■■□□□ 1.52
CALD1-212ENST00000454108 PIK3C2BO00750 1634 aa24.55■■□□□ 1.52
CALD1-212ENST00000454108 KANK1Q14678 1352 aa24.54■■□□□ 1.52
CALD1-212ENST00000454108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.54■■□□□ 1.526e-8■■■□□ 17.4
CALD1-212ENST00000454108 SLIT1O75093 1534 aa24.54■■□□□ 1.52
CALD1-212ENST00000454108 ANKRD30AQ9BXX3 1397 aa24.54■■□□□ 1.52
CALD1-212ENST00000454108 SOCS7O14512 581 aa24.53■■□□□ 1.52
CALD1-212ENST00000454108 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
CALD1-212ENST00000454108 ALKQ9UM73 1620 aa24.51■■□□□ 1.51
CALD1-212ENST00000454108 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
CALD1-212ENST00000454108 KDM5AP29375 1690 aaKnown RBP24.5■■□□□ 1.51
CALD1-212ENST00000454108 HSPA1LP34931 641 aa24.5■■□□□ 1.51
CALD1-212ENST00000454108 LRRC7Q96NW7 1537 aa24.5■■□□□ 1.51
CALD1-212ENST00000454108 CHIC2Q9UKJ5 165 aa24.49■■□□□ 1.51
CALD1-212ENST00000454108 EFCAB6Q5THR3 1501 aa24.47■■□□□ 1.51
CALD1-212ENST00000454108 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
CALD1-212ENST00000454108 ADGRL2O95490 1459 aa24.46■■□□□ 1.51
CALD1-212ENST00000454108 TXNDC2Q86VQ3 553 aa24.45■■□□□ 1.5
CALD1-212ENST00000454108 LTKP29376 864 aa24.44■■□□□ 1.5
CALD1-212ENST00000454108 EID1Q9Y6B2 187 aa24.43■■□□□ 1.5
CALD1-212ENST00000454108 TMEM2Q9UHN6 1383 aa24.42■■□□□ 1.5
CALD1-212ENST00000454108 STAG3Q9UJ98 1225 aa24.42■■□□□ 1.5
CALD1-212ENST00000454108 XIRP1Q702N8 1843 aaKnown RBP24.42■■□□□ 1.5
CALD1-212ENST00000454108 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
CALD1-212ENST00000454108 FAM50AQ14320 339 aaKnown RBP24.39■■□□□ 1.49
CALD1-212ENST00000454108 NOS1P29475 1434 aa24.37■■□□□ 1.49
CALD1-212ENST00000454108 ANKRD50Q9ULJ7 1429 aa24.36■■□□□ 1.49
CALD1-212ENST00000454108 TET3O43151 1660 aa24.35■■□□□ 1.49
CALD1-212ENST00000454108 IDI1Q13907 227 aa24.35■■□□□ 1.49
CALD1-212ENST00000454108 RPRD2Q5VT52 1461 aaKnown RBP24.34■■□□□ 1.49
CALD1-212ENST00000454108 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
CALD1-212ENST00000454108 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
CALD1-212ENST00000454108 UNC13BO14795 1591 aa24.31■■□□□ 1.48
CALD1-212ENST00000454108 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
CALD1-212ENST00000454108 SLC52A1Q9NWF4 448 aa24.28■■□□□ 1.48
CALD1-212ENST00000454108 NWD1Q149M9 1564 aa24.26■■□□□ 1.47
CALD1-212ENST00000454108 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
CALD1-212ENST00000454108 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
CALD1-212ENST00000454108 NKTRP30414 1462 aaKnown RBP24.24■■□□□ 1.47
CALD1-212ENST00000454108 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms