RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
PMS1-217ENST00000450931 MTUS2Q5JR59 1369 aa10.74□□□□□ -0.69
PMS1-217ENST00000450931 DHX29Q7Z478 1369 aaKnown RBP10.74□□□□□ -0.69
PMS1-217ENST00000450931 MED1Q15648 1581 aaPredicted RBP10.74□□□□□ -0.69
PMS1-217ENST00000450931 CEP162Q5TB80 1403 aa10.74□□□□□ -0.69
PMS1-217ENST00000450931 NLRP1Q9C000 1473 aa10.73□□□□□ -0.69
PMS1-217ENST00000450931 ZC3H13Q5T200 1668 aaKnown RBP10.73□□□□□ -0.69
PMS1-217ENST00000450931 MED14O60244 1454 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 CCDC141Q6ZP82 1450 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 SHANK2Q9UPX8 1470 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 TNRQ92752 1358 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 GGT6Q6P531 493 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 SYNMO15061 1565 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
PMS1-217ENST00000450931 ARHGEF5Q12774 1597 aa10.71□□□□□ -0.69
PMS1-217ENST00000450931 RNF17Q9BXT8 1623 aaKnown RBP10.7□□□□□ -0.7
PMS1-217ENST00000450931 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
PMS1-217ENST00000450931 TOM1O60784 492 aa10.69□□□□□ -0.7
PMS1-217ENST00000450931 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
PMS1-217ENST00000450931 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
PMS1-217ENST00000450931 UGGT1Q9NYU2 1555 aa10.69□□□□□ -0.7
PMS1-217ENST00000450931 CAMSAP2Q08AD1 1489 aa10.69□□□□□ -0.7
PMS1-217ENST00000450931 MAST1Q9Y2H9 1570 aa10.68□□□□□ -0.7
PMS1-217ENST00000450931 NPHP4O75161 1426 aaPredicted RBP10.67□□□□□ -0.7
PMS1-217ENST00000450931 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
PMS1-217ENST00000450931 ALKQ9UM73 1620 aa10.67□□□□□ -0.7
PMS1-217ENST00000450931 ANKLE2Q86XL3 938 aa10.66□□□□□ -0.7
PMS1-217ENST00000450931 THEMISQ8N1K5 641 aaPredicted RBP10.66□□□□□ -0.7
PMS1-217ENST00000450931 NCOA2Q15596 1464 aa10.65□□□□□ -0.7
PMS1-217ENST00000450931 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
PMS1-217ENST00000450931 HSPA1LP34931 641 aa10.65□□□□□ -0.71
PMS1-217ENST00000450931 ABCC3O15438 1527 aa10.64□□□□□ -0.71
PMS1-217ENST00000450931 KIF3BO15066 747 aa10.64□□□□□ -0.71
PMS1-217ENST00000450931 WASHC2CQ9Y4E1 1318 aa10.64□□□□□ -0.71
PMS1-217ENST00000450931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
PMS1-217ENST00000450931 LRRC7Q96NW7 1537 aa10.62□□□□□ -0.71
PMS1-217ENST00000450931 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
PMS1-217ENST00000450931 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
PMS1-217ENST00000450931 ERVK-7P63135 1459 aa10.62□□□□□ -0.71
PMS1-217ENST00000450931 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
PMS1-217ENST00000450931 MROH1Q8NDA8 1641 aa10.61□□□□□ -0.71
PMS1-217ENST00000450931 PIP4K2BP78356 416 aa10.61□□□□□ -0.71
PMS1-217ENST00000450931 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
PMS1-217ENST00000450931 SLIT1O75093 1534 aa10.6□□□□□ -0.71
PMS1-217ENST00000450931 KDM5AP29375 1690 aaKnown RBP10.6□□□□□ -0.71
PMS1-217ENST00000450931 ARHGAP23Q9P227 1491 aa10.59□□□□□ -0.71
PMS1-217ENST00000450931 CEP152O94986 1710 aa10.58□□□□□ -0.71
PMS1-217ENST00000450931 PRDM15P57071 1507 aaPredicted RBP10.58□□□□□ -0.72
PMS1-217ENST00000450931 SCAF11Q99590 1463 aaKnown RBP10.58□□□□□ -0.72
PMS1-217ENST00000450931 TSPY4P0CV99 314 aa10.58□□□□□ -0.72
PMS1-217ENST00000450931 TSPY10P0CW01 314 aa10.58□□□□□ -0.72
PMS1-217ENST00000450931 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
PMS1-217ENST00000450931 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
PMS1-217ENST00000450931 ARHGAP31Q2M1Z3 1444 aa10.58□□□□□ -0.72
PMS1-217ENST00000450931 PHF23Q9BUL5 403 aaPredicted RBP10.57□□□□□ -0.72
PMS1-217ENST00000450931 LRRC9Q6ZRR7 1453 aa10.56□□□□□ -0.72
PMS1-217ENST00000450931 CROCC2H7BZ55 1655 aa10.56□□□□□ -0.72
PMS1-217ENST00000450931 XIRP1Q702N8 1843 aaKnown RBP10.56□□□□□ -0.72
PMS1-217ENST00000450931 ERBINQ96RT1 1412 aa10.55□□□□□ -0.72
PMS1-217ENST00000450931 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
PMS1-217ENST00000450931 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
PMS1-217ENST00000450931 PIK3C2BO00750 1634 aa10.52□□□□□ -0.73
PMS1-217ENST00000450931 LMTK2Q8IWU2 1503 aa10.52□□□□□ -0.73
PMS1-217ENST00000450931 FAM135BQ49AJ0 1406 aa10.52□□□□□ -0.73
PMS1-217ENST00000450931 NWD1Q149M9 1564 aa10.51□□□□□ -0.73
PMS1-217ENST00000450931 EFCAB6Q5THR3 1501 aa10.5□□□□□ -0.73
PMS1-217ENST00000450931 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
PMS1-217ENST00000450931 EID1Q9Y6B2 187 aa10.49□□□□□ -0.73
PMS1-217ENST00000450931 TMEM2Q9UHN6 1383 aa10.49□□□□□ -0.73
PMS1-217ENST00000450931 KIF15Q9NS87 1388 aa10.48□□□□□ -0.73
PMS1-217ENST00000450931 TET3O43151 1660 aa10.48□□□□□ -0.73
PMS1-217ENST00000450931 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
PMS1-217ENST00000450931 ADGRB3O60242 1522 aa10.47□□□□□ -0.73
PMS1-217ENST00000450931 ROBO1Q9Y6N7 1651 aa10.47□□□□□ -0.73
PMS1-217ENST00000450931 KANK1Q14678 1352 aa10.47□□□□□ -0.73
PMS1-217ENST00000450931 LTKP29376 864 aa10.47□□□□□ -0.73
PMS1-217ENST00000450931 PTPN23Q9H3S7 1636 aa10.46□□□□□ -0.73
PMS1-217ENST00000450931 RGS17Q9UGC6 210 aaPredicted RBP10.45□□□□□ -0.74
PMS1-217ENST00000450931 ABCC5O15440 1437 aa10.45□□□□□ -0.74
PMS1-217ENST00000450931 CFAP65Q6ZU64 1925 aaKnown RBP10.44□□□□□ -0.74
PMS1-217ENST00000450931 KCNA6P17658 529 aa10.44□□□□□ -0.74
PMS1-217ENST00000450931 NOS1P29475 1434 aa10.44□□□□□ -0.74
PMS1-217ENST00000450931 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
PMS1-217ENST00000450931 DAPK1P53355 1430 aa10.44□□□□□ -0.74
PMS1-217ENST00000450931 RPRD2Q5VT52 1461 aaKnown RBP10.44□□□□□ -0.74
PMS1-217ENST00000450931 PHLPP1O60346 1717 aa10.42□□□□□ -0.74
PMS1-217ENST00000450931 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
PMS1-217ENST00000450931 ADGRL2O95490 1459 aa10.41□□□□□ -0.74
PMS1-217ENST00000450931 CHD2O14647 1828 aaKnown RBP10.41□□□□□ -0.74
PMS1-217ENST00000450931 ANKRD30AQ9BXX3 1397 aa10.41□□□□□ -0.74
PMS1-217ENST00000450931 MSH6P52701 1360 aa10.4□□□□□ -0.74
PMS1-217ENST00000450931 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
PMS1-217ENST00000450931 DIP2AQ14689 1571 aa10.4□□□□□ -0.74
PMS1-217ENST00000450931 SLC52A1Q9NWF4 448 aa10.4□□□□□ -0.74
PMS1-217ENST00000450931 FGD6Q6ZV73 1430 aa10.4□□□□□ -0.74
PMS1-217ENST00000450931 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.75
PMS1-217ENST00000450931 JCADQ9P266 1359 aa10.4□□□□□ -0.75
PMS1-217ENST00000450931 KANK4Q5T7N3 995 aaPredicted RBP10.39□□□□□ -0.75
PMS1-217ENST00000450931 ZFYVE9O95405 1425 aa10.39□□□□□ -0.75
PMS1-217ENST00000450931 GCC2Q8IWJ2 1684 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms