RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 WASHC2CQ9Y4E1 1318 aa24.64■■□□□ 1.54
TRA2A-203ENST00000448549 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
TRA2A-203ENST00000448549 TCOF1Q13428 1488 aaKnown RBP24.63■■□□□ 1.53
TRA2A-203ENST00000448549 ZNF142P52746 1687 aaPredicted RBP24.62■■□□□ 1.53
TRA2A-203ENST00000448549 A2ML1A8K2U0 1454 aa24.61■■□□□ 1.53
TRA2A-203ENST00000448549 TNRQ92752 1358 aa24.6■■□□□ 1.53
TRA2A-203ENST00000448549 ARHGEF5Q12774 1597 aa24.59■■□□□ 1.53
TRA2A-203ENST00000448549 IQSEC2Q5JU85 1478 aa24.59■■□□□ 1.53
TRA2A-203ENST00000448549 KDM5DQ9BY66 1539 aa24.58■■□□□ 1.53
TRA2A-203ENST00000448549 PZPP20742 1482 aa24.57■■□□□ 1.52
TRA2A-203ENST00000448549 DNMT1P26358 1616 aaKnown RBP24.54■■□□□ 1.52
TRA2A-203ENST00000448549 FAM135AQ9P2D6 1515 aa24.54■■□□□ 1.52
TRA2A-203ENST00000448549 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
TRA2A-203ENST00000448549 MAP3K1Q13233 1512 aa24.52■■□□□ 1.52
TRA2A-203ENST00000448549 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
TRA2A-203ENST00000448549 UBAP1LF5GYI3 381 aa24.51■■□□□ 1.51
TRA2A-203ENST00000448549 MYOM3Q5VTT5 1437 aa24.51■■□□□ 1.51
TRA2A-203ENST00000448549 THEMISQ8N1K5 641 aaPredicted RBP24.48■■□□□ 1.51
TRA2A-203ENST00000448549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.48■■□□□ 1.511e-7■■□□□ 12.6
TRA2A-203ENST00000448549 ANKLE2Q86XL3 938 aa24.47■■□□□ 1.51
TRA2A-203ENST00000448549 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
TRA2A-203ENST00000448549 NLRP1Q9C000 1473 aa24.45■■□□□ 1.5
TRA2A-203ENST00000448549 ILDR2Q71H61 639 aa24.43■■□□□ 1.5
TRA2A-203ENST00000448549 ABCC3O15438 1527 aa24.43■■□□□ 1.5
TRA2A-203ENST00000448549 APLP2Q06481 763 aa24.42■■□□□ 1.5
TRA2A-203ENST00000448549 NEURL4Q96JN8 1562 aa24.42■■□□□ 1.5
TRA2A-203ENST00000448549 RNF17Q9BXT8 1623 aaKnown RBP24.41■■□□□ 1.5
TRA2A-203ENST00000448549 UGGT1Q9NYU2 1555 aa24.41■■□□□ 1.5
TRA2A-203ENST00000448549 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
TRA2A-203ENST00000448549 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
TRA2A-203ENST00000448549 ABCC5O15440 1437 aa24.36■■□□□ 1.49
TRA2A-203ENST00000448549 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
TRA2A-203ENST00000448549 DUOX2Q9NRD8 1548 aa24.36■■□□□ 1.49
TRA2A-203ENST00000448549 EIF2AK4Q9P2K8 1649 aaKnown RBP24.36■■□□□ 1.49
TRA2A-203ENST00000448549 KIF15Q9NS87 1388 aa24.36■■□□□ 1.49
TRA2A-203ENST00000448549 SPATA31D1Q6ZQQ2 1576 aa24.35■■□□□ 1.49
TRA2A-203ENST00000448549 ERVK-7P63135 1459 aa24.35■■□□□ 1.49
TRA2A-203ENST00000448549 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
TRA2A-203ENST00000448549 MROH1Q8NDA8 1641 aa24.35■■□□□ 1.49
TRA2A-203ENST00000448549 CPS1P31327 1500 aa24.34■■□□□ 1.49
TRA2A-203ENST00000448549 MED14O60244 1454 aa24.33■■□□□ 1.49
TRA2A-203ENST00000448549 ZC3H13Q5T200 1668 aaKnown RBP24.33■■□□□ 1.49
TRA2A-203ENST00000448549 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
TRA2A-203ENST00000448549 PIP4K2BP78356 416 aa24.31■■□□□ 1.48
TRA2A-203ENST00000448549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.31■■□□□ 1.488e-8■□□□□ 9.6
TRA2A-203ENST00000448549 TOM1O60784 492 aa24.3■■□□□ 1.48
TRA2A-203ENST00000448549 VWDEQ8N2E2 1590 aa24.29■■□□□ 1.48
TRA2A-203ENST00000448549 DAPK1P53355 1430 aa24.29■■□□□ 1.48
TRA2A-203ENST00000448549 ERBINQ96RT1 1412 aa24.29■■□□□ 1.48
TRA2A-203ENST00000448549 DEPDC5O75140 1603 aa24.28■■□□□ 1.48
TRA2A-203ENST00000448549 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
TRA2A-203ENST00000448549 FGD6Q6ZV73 1430 aa24.28■■□□□ 1.48
TRA2A-203ENST00000448549 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
TRA2A-203ENST00000448549 SOCS7O14512 581 aa24.27■■□□□ 1.48
TRA2A-203ENST00000448549 HSPA1LP34931 641 aa24.26■■□□□ 1.47
TRA2A-203ENST00000448549 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
TRA2A-203ENST00000448549 CEP152O94986 1710 aa24.24■■□□□ 1.47
TRA2A-203ENST00000448549 PRDM15P57071 1507 aaPredicted RBP24.24■■□□□ 1.47
TRA2A-203ENST00000448549 ANKRD30AQ9BXX3 1397 aa24.22■■□□□ 1.47
TRA2A-203ENST00000448549 LTKP29376 864 aa24.22■■□□□ 1.47
TRA2A-203ENST00000448549 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
TRA2A-203ENST00000448549 CROCC2H7BZ55 1655 aa24.21■■□□□ 1.47
TRA2A-203ENST00000448549 IQGAP1P46940 1657 aa24.21■■□□□ 1.47
TRA2A-203ENST00000448549 KANK1Q14678 1352 aa24.21■■□□□ 1.47
TRA2A-203ENST00000448549 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
TRA2A-203ENST00000448549 UBR1Q8IWV7 1749 aa24.17■■□□□ 1.46
TRA2A-203ENST00000448549 LRRC7Q96NW7 1537 aa24.16■■□□□ 1.46
TRA2A-203ENST00000448549 ARHGAP23Q9P227 1491 aa24.16■■□□□ 1.46
TRA2A-203ENST00000448549 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
TRA2A-203ENST00000448549 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
TRA2A-203ENST00000448549 STAG3Q9UJ98 1225 aa24.15■■□□□ 1.46
TRA2A-203ENST00000448549 SLIT1O75093 1534 aa24.15■■□□□ 1.46
TRA2A-203ENST00000448549 IDI1Q13907 227 aa24.13■■□□□ 1.45
TRA2A-203ENST00000448549 CFAP65Q6ZU64 1925 aaKnown RBP24.12■■□□□ 1.45
TRA2A-203ENST00000448549 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
TRA2A-203ENST00000448549 TMEM2Q9UHN6 1383 aa24.12■■□□□ 1.45
TRA2A-203ENST00000448549 LMTK2Q8IWU2 1503 aa24.11■■□□□ 1.45
TRA2A-203ENST00000448549 STRCP1A6NGW2 1772 aa24.1■■□□□ 1.45
TRA2A-203ENST00000448549 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
TRA2A-203ENST00000448549 PIK3C2BO00750 1634 aa24.08■■□□□ 1.45
TRA2A-203ENST00000448549 ADGRL2O95490 1459 aa24.07■■□□□ 1.44
TRA2A-203ENST00000448549 SYNMO15061 1565 aa24.05■■□□□ 1.44
TRA2A-203ENST00000448549 NOS1P29475 1434 aa24.05■■□□□ 1.44
TRA2A-203ENST00000448549 EFCAB6Q5THR3 1501 aa24.05■■□□□ 1.44
TRA2A-203ENST00000448549 ANKRD50Q9ULJ7 1429 aa24.04■■□□□ 1.44
TRA2A-203ENST00000448549 MED1Q15648 1581 aaPredicted RBP24.03■■□□□ 1.44
TRA2A-203ENST00000448549 SLC52A1Q9NWF4 448 aa24.02■■□□□ 1.44
TRA2A-203ENST00000448549 SLC26A8Q96RN1 970 aa24.01■■□□□ 1.43
TRA2A-203ENST00000448549 KCNA6P17658 529 aa23.98■■□□□ 1.43
TRA2A-203ENST00000448549 BCANQ96GW7 911 aa23.96■■□□□ 1.43
TRA2A-203ENST00000448549 KDM5AP29375 1690 aaKnown RBP23.95■■□□□ 1.43
TRA2A-203ENST00000448549 ADGRB3O60242 1522 aa23.95■■□□□ 1.43
TRA2A-203ENST00000448549 TMEM94Q12767 1356 aa23.95■■□□□ 1.42
TRA2A-203ENST00000448549 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
TRA2A-203ENST00000448549 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
TRA2A-203ENST00000448549 PROSER2Q86WR7 435 aaPredicted RBP23.94■■□□□ 1.42
TRA2A-203ENST00000448549 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
TRA2A-203ENST00000448549 TET3O43151 1660 aa23.93■■□□□ 1.42
TRA2A-203ENST00000448549 PPP1R15AO75807 674 aaPredicted RBP23.88■■□□□ 1.41
TRA2A-203ENST00000448549 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms