RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
SHC1-210ENST00000448116 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.36
SHC1-210ENST00000448116 NBR1Q14596 966 aa17.26■□□□□ 0.35
SHC1-210ENST00000448116 POLR1AO95602 1720 aaPredicted RBP17.26■□□□□ 0.35
SHC1-210ENST00000448116 PTPRGP23470 1445 aa17.25■□□□□ 0.35
SHC1-210ENST00000448116 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
SHC1-210ENST00000448116 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
SHC1-210ENST00000448116 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
SHC1-210ENST00000448116 NUP160Q12769 1436 aa17.24■□□□□ 0.35
SHC1-210ENST00000448116 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
SHC1-210ENST00000448116 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
SHC1-210ENST00000448116 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
SHC1-210ENST00000448116 CCDC144AA2RUR9 1427 aa17.23■□□□□ 0.35
SHC1-210ENST00000448116 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
SHC1-210ENST00000448116 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
SHC1-210ENST00000448116 ANP32AP39687 249 aaKnown RBP17.23■□□□□ 0.35
SHC1-210ENST00000448116 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
SHC1-210ENST00000448116 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
SHC1-210ENST00000448116 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
SHC1-210ENST00000448116 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
SHC1-210ENST00000448116 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
SHC1-210ENST00000448116 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
SHC1-210ENST00000448116 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
SHC1-210ENST00000448116 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
SHC1-210ENST00000448116 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
SHC1-210ENST00000448116 PANK3Q9H999 370 aa17.19■□□□□ 0.34
SHC1-210ENST00000448116 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
SHC1-210ENST00000448116 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
SHC1-210ENST00000448116 ABCA8O94911 1581 aa17.18■□□□□ 0.34
SHC1-210ENST00000448116 UBE2Q2Q8WVN8 375 aa17.18■□□□□ 0.34
SHC1-210ENST00000448116 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
SHC1-210ENST00000448116 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
SHC1-210ENST00000448116 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
SHC1-210ENST00000448116 PLIN1O60240 522 aa17.16■□□□□ 0.34
SHC1-210ENST00000448116 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
SHC1-210ENST00000448116 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
SHC1-210ENST00000448116 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
SHC1-210ENST00000448116 PRAG1Q86YV5 1406 aa17.14■□□□□ 0.33
SHC1-210ENST00000448116 TMF1P82094 1093 aa17.13■□□□□ 0.33
SHC1-210ENST00000448116 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
SHC1-210ENST00000448116 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
SHC1-210ENST00000448116 DEKP35659 375 aaKnown RBP17.12■□□□□ 0.33
SHC1-210ENST00000448116 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
SHC1-210ENST00000448116 PARD3Q8TEW0 1356 aa17.11■□□□□ 0.33
SHC1-210ENST00000448116 TESK2Q96S53 571 aa17.11■□□□□ 0.33
SHC1-210ENST00000448116 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
SHC1-210ENST00000448116 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
SHC1-210ENST00000448116 PLEKHH2Q8IVE3 1493 aa17.1■□□□□ 0.33
SHC1-210ENST00000448116 SYCP2Q9BX26 1530 aa17.09■□□□□ 0.33
SHC1-210ENST00000448116 SAMD9LQ8IVG5 1584 aa17.09■□□□□ 0.33
SHC1-210ENST00000448116 PLA2R1Q13018 1463 aa17.08■□□□□ 0.33
SHC1-210ENST00000448116 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
SHC1-210ENST00000448116 ARHGEF5Q12774 1597 aa17.07■□□□□ 0.32
SHC1-210ENST00000448116 A2MP01023 1474 aa17.07■□□□□ 0.32
SHC1-210ENST00000448116 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
SHC1-210ENST00000448116 PKNOX2Q96KN3 472 aa17.06■□□□□ 0.32
SHC1-210ENST00000448116 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
SHC1-210ENST00000448116 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
SHC1-210ENST00000448116 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
SHC1-210ENST00000448116 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
SHC1-210ENST00000448116 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
SHC1-210ENST00000448116 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
SHC1-210ENST00000448116 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
SHC1-210ENST00000448116 PDE4AP27815 886 aa17.05■□□□□ 0.32
SHC1-210ENST00000448116 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.327e-6■■■■■ 27.3
SHC1-210ENST00000448116 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
SHC1-210ENST00000448116 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
SHC1-210ENST00000448116 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.31
SHC1-210ENST00000448116 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.31
SHC1-210ENST00000448116 COL17A1Q9UMD9 1497 aaPredicted RBP17.01■□□□□ 0.31
SHC1-210ENST00000448116 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
SHC1-210ENST00000448116 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
SHC1-210ENST00000448116 AFAP1Q8N556 730 aa17■□□□□ 0.31
SHC1-210ENST00000448116 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
SHC1-210ENST00000448116 PREX2Q70Z35 1606 aa16.98■□□□□ 0.31
SHC1-210ENST00000448116 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
SHC1-210ENST00000448116 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
SHC1-210ENST00000448116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHC1-210ENST00000448116 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
SHC1-210ENST00000448116 BACH2Q9BYV9 841 aa16.97■□□□□ 0.31
SHC1-210ENST00000448116 E9PCH4 1651 aa16.96■□□□□ 0.31
SHC1-210ENST00000448116 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.31
SHC1-210ENST00000448116 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
SHC1-210ENST00000448116 MS4A1P11836 297 aa16.92■□□□□ 0.3
SHC1-210ENST00000448116 PRDM15P57071 1507 aaPredicted RBP16.92■□□□□ 0.3
SHC1-210ENST00000448116 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
SHC1-210ENST00000448116 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
SHC1-210ENST00000448116 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
SHC1-210ENST00000448116 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
SHC1-210ENST00000448116 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
SHC1-210ENST00000448116 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
SHC1-210ENST00000448116 KIF3BO15066 747 aa16.9■□□□□ 0.3
SHC1-210ENST00000448116 PLEKHH1Q9ULM0 1364 aa16.9■□□□□ 0.3
SHC1-210ENST00000448116 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
SHC1-210ENST00000448116 UNC13BO14795 1591 aa16.9■□□□□ 0.3
SHC1-210ENST00000448116 NEFMP07197 916 aa16.89■□□□□ 0.29
SHC1-210ENST00000448116 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
SHC1-210ENST00000448116 APAF1O14727 1248 aa16.88■□□□□ 0.29
SHC1-210ENST00000448116 PLCH2O75038 1416 aa16.88■□□□□ 0.29
SHC1-210ENST00000448116 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms