RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 PDIA4P13667 645 aaKnown RBP6.29□□□□□ -1.4
SRRM1-203ENST00000447431 MRE11P49959 708 aa6.29□□□□□ -1.4
SRRM1-203ENST00000447431 MPHOSPH9Q99550 1183 aa6.29□□□□□ -1.4
SRRM1-203ENST00000447431 CARMIL1Q5VZK9 1371 aa6.29□□□□□ -1.4
SRRM1-203ENST00000447431 SLKQ9H2G2 1235 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-203ENST00000447431 HFM1A2PYH4 1435 aa6.29□□□□□ -1.4
SRRM1-203ENST00000447431 POTEDQ86YR6 584 aa6.28□□□□□ -1.4
SRRM1-203ENST00000447431 SLC24A3Q9HC58 644 aa6.28□□□□□ -1.4
SRRM1-203ENST00000447431 UNC13AQ9UPW8 1703 aa6.28□□□□□ -1.4
SRRM1-203ENST00000447431 BRD4O60885 1362 aaPredicted RBP6.28□□□□□ -1.4
SRRM1-203ENST00000447431 CLCN1P35523 988 aa6.28□□□□□ -1.4
SRRM1-203ENST00000447431 PNISRQ8TF01 805 aaKnown RBP6.28□□□□□ -1.4
SRRM1-203ENST00000447431 FGD6Q6ZV73 1430 aa6.28□□□□□ -1.4
SRRM1-203ENST00000447431 MAPK8IP3Q9UPT6 1336 aa6.28□□□□□ -1.4
SRRM1-203ENST00000447431 MTERF4Q7Z6M4 381 aaKnown RBP6.28□□□□□ -1.4
SRRM1-203ENST00000447431 NCOA1Q15788 1441 aa6.27□□□□□ -1.41
SRRM1-203ENST00000447431 SENP3-EIF4A1A0A087X0R7 540 aa6.27□□□□□ -1.41
SRRM1-203ENST00000447431 DDX11L8A8MPP1 907 aa6.27□□□□□ -1.41
SRRM1-203ENST00000447431 CARD11Q9BXL7 1154 aa6.27□□□□□ -1.41
SRRM1-203ENST00000447431 PDCL3Q9H2J4 239 aa6.27□□□□□ -1.41
SRRM1-203ENST00000447431 CRBNQ96SW2 442 aa6.27□□□□□ -1.41
SRRM1-203ENST00000447431 NCOA2Q15596 1464 aa6.26□□□□□ -1.41
SRRM1-203ENST00000447431 ARID3CA6NKF2 412 aa6.26□□□□□ -1.41
SRRM1-203ENST00000447431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.26□□□□□ -1.41
SRRM1-203ENST00000447431 GBP4Q96PP9 640 aa6.26□□□□□ -1.41
SRRM1-203ENST00000447431 TOP2BQ02880 1626 aa6.26□□□□□ -1.41
SRRM1-203ENST00000447431 GZF1Q9H116 711 aaPredicted RBP6.25□□□□□ -1.41
SRRM1-203ENST00000447431 SKOR2Q2VWA4 1001 aaPredicted RBP6.25□□□□□ -1.41
SRRM1-203ENST00000447431 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.25□□□□□ -1.41
SRRM1-203ENST00000447431 HSCBQ8IWL3 235 aa6.25□□□□□ -1.41
SRRM1-203ENST00000447431 ESPNB1AK53 854 aa6.24□□□□□ -1.41
SRRM1-203ENST00000447431 NKX1-1Q15270 411 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-203ENST00000447431 CHMP5Q9NZZ3 219 aa6.24□□□□□ -1.41
SRRM1-203ENST00000447431 GTPBP6O43824 516 aaPredicted RBP6.24□□□□□ -1.41
SRRM1-203ENST00000447431 MIA2Q96PC5 1412 aa6.24□□□□□ -1.41
SRRM1-203ENST00000447431 USP47Q96K76 1375 aa6.23□□□□□ -1.41
SRRM1-203ENST00000447431 STAG3Q9UJ98 1225 aa6.23□□□□□ -1.41
SRRM1-203ENST00000447431 CUX1P39880 1505 aa6.23□□□□□ -1.41
SRRM1-203ENST00000447431 EIF3AQ14152 1382 aaKnown RBP6.23□□□□□ -1.41
SRRM1-203ENST00000447431 APBB1O00213 710 aa6.23□□□□□ -1.41
SRRM1-203ENST00000447431 PLIN1O60240 522 aa6.23□□□□□ -1.41
SRRM1-203ENST00000447431 POGKQ9P215 609 aa6.23□□□□□ -1.41
SRRM1-203ENST00000447431 GOLGA2Q08379 1002 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 FYCO1Q9BQS8 1478 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 POLA2Q14181 598 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 PMFBP1Q8TBY8 1022 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 KCNV2Q8TDN2 545 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 CGNL1Q0VF96 1302 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 NAIPQ13075 1403 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 MYOM3Q5VTT5 1437 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 CASKIN1Q8WXD9 1431 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 NCAPD3P42695 1498 aa6.22□□□□□ -1.41
SRRM1-203ENST00000447431 AAMPQ13685 434 aa6.21□□□□□ -1.41
SRRM1-203ENST00000447431 TRAK2O60296 914 aa6.21□□□□□ -1.42
SRRM1-203ENST00000447431 CSPP1Q1MSJ5 1256 aa6.21□□□□□ -1.42
SRRM1-203ENST00000447431 RRAGDQ9NQL2 400 aaPredicted RBP6.21□□□□□ -1.42
SRRM1-203ENST00000447431 MCM4P33991 863 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 DCAF11Q8TEB1 546 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 ZC3H15Q8WU90 426 aaKnown RBP6.2□□□□□ -1.42
SRRM1-203ENST00000447431 GRPEL1Q9HAV7 217 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 STK24Q9Y6E0 443 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 HSP90AB1P08238 724 aaKnown RBP6.2□□□□□ -1.42
SRRM1-203ENST00000447431 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
SRRM1-203ENST00000447431 DNTTIP2Q5QJE6 756 aaKnown RBP6.2□□□□□ -1.42
SRRM1-203ENST00000447431 IGF1RP08069 1367 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 FHOD3Q2V2M9 1422 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 ATAD2BQ9ULI0 1458 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 PEG3Q9GZU2 1588 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 CALD1Q05682 793 aaKnown RBP6.2□□□□□ -1.42
SRRM1-203ENST00000447431 CDCA8Q53HL2 280 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 KNSTRNQ9Y448 316 aa6.2□□□□□ -1.42
SRRM1-203ENST00000447431 CCDC173Q0VFZ6 552 aa6.19□□□□□ -1.42
SRRM1-203ENST00000447431 KIAA1211Q6ZU35 1233 aa6.19□□□□□ -1.42
SRRM1-203ENST00000447431 NGEFQ8N5V2 710 aa6.19□□□□□ -1.42
SRRM1-203ENST00000447431 RWDD1Q9H446 243 aaPredicted RBP6.19□□□□□ -1.42
SRRM1-203ENST00000447431 PTMAP06454 111 aaKnown RBP6.19□□□□□ -1.42
SRRM1-203ENST00000447431 XRCC6P12956 609 aaKnown RBP eCLIP6.19□□□□□ -1.42
SRRM1-203ENST00000447431 FAM13BQ9NYF5 915 aa6.19□□□□□ -1.42
SRRM1-203ENST00000447431 BICRAQ9NZM4 1560 aa6.19□□□□□ -1.42
SRRM1-203ENST00000447431 PLEKHH2Q8IVE3 1493 aa6.19□□□□□ -1.42
SRRM1-203ENST00000447431 A0A0U1RQG5 324 aaPredicted RBP6.18□□□□□ -1.42
SRRM1-203ENST00000447431 NBPF8Q3BBV2 869 aa6.18□□□□□ -1.42
SRRM1-203ENST00000447431 PTPN23Q9H3S7 1636 aa6.18□□□□□ -1.42
SRRM1-203ENST00000447431 CC2D1BQ5T0F9 858 aaKnown RBP6.18□□□□□ -1.42
SRRM1-203ENST00000447431 RNF25Q96BH1 459 aaPredicted RBP6.18□□□□□ -1.42
SRRM1-203ENST00000447431 ZNF692Q9BU19 519 aaPredicted RBP6.18□□□□□ -1.42
SRRM1-203ENST00000447431 CDCA7LQ96GN5 454 aa6.18□□□□□ -1.42
SRRM1-203ENST00000447431 AQRO60306 1485 aaKnown RBP eCLIP6.17□□□□□ -1.427e-7■■■■□ 25.1
SRRM1-203ENST00000447431 EFCAB5A4FU69 1503 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 TMF1P82094 1093 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 ZSCAN30Q86W11 494 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 CENPJQ9HC77 1338 aaPredicted RBP6.17□□□□□ -1.42
SRRM1-203ENST00000447431 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 GPBP1L1Q9HC44 474 aaPredicted RBP6.17□□□□□ -1.42
SRRM1-203ENST00000447431 TERF1P54274 439 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 DCAF8Q5TAQ9 597 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 KCTD17Q8N5Z5 321 aa6.17□□□□□ -1.42
SRRM1-203ENST00000447431 RYDENQ9NUL5 291 aaKnown RBP6.17□□□□□ -1.42
SRRM1-203ENST00000447431 ST20-MTHFSA0A0A6YYL1 179 aa6.16□□□□□ -1.42
SRRM1-203ENST00000447431 RIOK3O14730 519 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms