RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 ESF1Q9H501 851 aaKnown RBP33.77■■■■□ 3
TRAF4-205ENST00000444415 PTPRKQ15262 1439 aa33.75■■■□□ 2.99
TRAF4-205ENST00000444415 ADGRL2O95490 1459 aa33.75■■■□□ 2.99
TRAF4-205ENST00000444415 PPP6R1Q9UPN7 881 aa33.75■■■□□ 2.99
TRAF4-205ENST00000444415 CHIC2Q9UKJ5 165 aa33.74■■■□□ 2.99
TRAF4-205ENST00000444415 NCOA1Q15788 1441 aa33.74■■■□□ 2.99
TRAF4-205ENST00000444415 KDM5DQ9BY66 1539 aa33.74■■■□□ 2.99
TRAF4-205ENST00000444415 FAM135AQ9P2D6 1515 aa33.73■■■□□ 2.99
TRAF4-205ENST00000444415 RRP7BPQ9NSQ0 103 aa33.72■■■□□ 2.99
TRAF4-205ENST00000444415 ERBINQ96RT1 1412 aa33.71■■■□□ 2.99
TRAF4-205ENST00000444415 HSPA2P54652 639 aa33.68■■■□□ 2.98
TRAF4-205ENST00000444415 NPATQ14207 1427 aa33.67■■■□□ 2.98
TRAF4-205ENST00000444415 ANKRD30AQ9BXX3 1397 aa33.67■■■□□ 2.98
TRAF4-205ENST00000444415 ABCC3O15438 1527 aa33.66■■■□□ 2.98
TRAF4-205ENST00000444415 DEPDC5O75140 1603 aa33.65■■■□□ 2.98
TRAF4-205ENST00000444415 PRDM15P57071 1507 aaPredicted RBP33.64■■■□□ 2.98
TRAF4-205ENST00000444415 ZC3H13Q5T200 1668 aaKnown RBP33.64■■■□□ 2.98
TRAF4-205ENST00000444415 UHRF1BP1Q6BDS2 1440 aa33.64■■■□□ 2.98
TRAF4-205ENST00000444415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.63■■■□□ 2.971e-7■■□□□ 12.7
TRAF4-205ENST00000444415 CEP152O94986 1710 aa33.63■■■□□ 2.97
TRAF4-205ENST00000444415 RRBP1Q9P2E9 1410 aaKnown RBP33.62■■■□□ 2.97
TRAF4-205ENST00000444415 WASHC2CQ9Y4E1 1318 aa33.6■■■□□ 2.97
TRAF4-205ENST00000444415 PZPP20742 1482 aa33.59■■■□□ 2.97
TRAF4-205ENST00000444415 MYO3AQ8NEV4 1616 aa33.59■■■□□ 2.97
TRAF4-205ENST00000444415 CAMSAP1Q5T5Y3 1602 aa33.55■■■□□ 2.96
TRAF4-205ENST00000444415 ZNF142P52746 1687 aaPredicted RBP33.54■■■□□ 2.96
TRAF4-205ENST00000444415 FBXO31Q5XUX0 539 aaPredicted RBP33.53■■■□□ 2.96
TRAF4-205ENST00000444415 VWDEQ8N2E2 1590 aa33.53■■■□□ 2.96
TRAF4-205ENST00000444415 STRCQ7RTU9 1775 aa33.52■■■□□ 2.96
TRAF4-205ENST00000444415 ROCK1Q13464 1354 aa33.51■■■□□ 2.96
TRAF4-205ENST00000444415 ANKRD50Q9ULJ7 1429 aa33.5■■■□□ 2.95
TRAF4-205ENST00000444415 CEP170BQ9Y4F5 1589 aaPredicted RBP33.48■■■□□ 2.95
TRAF4-205ENST00000444415 ITGAEP38570 1179 aa33.45■■■□□ 2.95
TRAF4-205ENST00000444415 SPATA31D1Q6ZQQ2 1576 aa33.44■■■□□ 2.94
TRAF4-205ENST00000444415 CFAP65Q6ZU64 1925 aaKnown RBP33.44■■■□□ 2.94
TRAF4-205ENST00000444415 TNRQ92752 1358 aa33.43■■■□□ 2.94
TRAF4-205ENST00000444415 LMTK2Q8IWU2 1503 aa33.42■■■□□ 2.94
TRAF4-205ENST00000444415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.41■■■□□ 2.949e-7■■■□□ 14.9
TRAF4-205ENST00000444415 ERVK-7P63135 1459 aa33.41■■■□□ 2.94
TRAF4-205ENST00000444415 ARHGAP31Q2M1Z3 1444 aa33.4■■■□□ 2.94
TRAF4-205ENST00000444415 UNC13BO14795 1591 aa33.39■■■□□ 2.94
TRAF4-205ENST00000444415 A2ML1A8K2U0 1454 aa33.38■■■□□ 2.93
TRAF4-205ENST00000444415 EFCAB6Q5THR3 1501 aa33.34■■■□□ 2.93
TRAF4-205ENST00000444415 KANK1Q14678 1352 aa33.34■■■□□ 2.93
TRAF4-205ENST00000444415 NLRP1Q9C000 1473 aa33.31■■■□□ 2.92
TRAF4-205ENST00000444415 PLA2R1Q13018 1463 aa33.29■■■□□ 2.92
TRAF4-205ENST00000444415 GCC2Q8IWJ2 1684 aa33.27■■■□□ 2.92
TRAF4-205ENST00000444415 TET3O43151 1660 aa33.26■■■□□ 2.92
TRAF4-205ENST00000444415 NAIPQ13075 1403 aa33.25■■■□□ 2.91
TRAF4-205ENST00000444415 IQGAP3Q86VI3 1631 aa33.25■■■□□ 2.91
TRAF4-205ENST00000444415 SYNMO15061 1565 aa33.23■■■□□ 2.91
TRAF4-205ENST00000444415 UGGT1Q9NYU2 1555 aa33.23■■■□□ 2.91
TRAF4-205ENST00000444415 UBR1Q8IWV7 1749 aa33.2■■■□□ 2.91
TRAF4-205ENST00000444415 PTPRTO14522 1441 aa33.2■■■□□ 2.91
TRAF4-205ENST00000444415 NOS1P29475 1434 aa33.2■■■□□ 2.9
TRAF4-205ENST00000444415 NCKAP5LQ9HCH0 1330 aa33.19■■■□□ 2.9
TRAF4-205ENST00000444415 E9PCH4 1651 aa33.18■■■□□ 2.9
TRAF4-205ENST00000444415 POLR1AO95602 1720 aaPredicted RBP33.17■■■□□ 2.9
TRAF4-205ENST00000444415 NEURL4Q96JN8 1562 aa33.17■■■□□ 2.9
TRAF4-205ENST00000444415 HFM1A2PYH4 1435 aa33.16■■■□□ 2.9
TRAF4-205ENST00000444415 RPRD2Q5VT52 1461 aaKnown RBP33.15■■■□□ 2.9
TRAF4-205ENST00000444415 PIK3C2BO00750 1634 aa33.15■■■□□ 2.9
TRAF4-205ENST00000444415 DMRT2Q9Y5R5 561 aa33.12■■■□□ 2.89
TRAF4-205ENST00000444415 NUP155O75694 1391 aa33.12■■■□□ 2.89
TRAF4-205ENST00000444415 PKD2Q13563 968 aa33.09■■■□□ 2.89
TRAF4-205ENST00000444415 THEMISQ8N1K5 641 aaPredicted RBP33.07■■■□□ 2.88
TRAF4-205ENST00000444415 KDM5AP29375 1690 aaKnown RBP33.06■■■□□ 2.88
TRAF4-205ENST00000444415 IDI1Q13907 227 aa33.05■■■□□ 2.88
TRAF4-205ENST00000444415 ARHGAP23Q9P227 1491 aa33.03■■■□□ 2.88
TRAF4-205ENST00000444415 SLIT1O75093 1534 aa33.01■■■□□ 2.88
TRAF4-205ENST00000444415 LTBP4Q8N2S1 1624 aa33.01■■■□□ 2.87
TRAF4-205ENST00000444415 MED14O60244 1454 aa33■■■□□ 2.87
TRAF4-205ENST00000444415 ADGRB3O60242 1522 aa32.99■■■□□ 2.87
TRAF4-205ENST00000444415 MYO5BQ9ULV0 1848 aa32.99■■■□□ 2.87
TRAF4-205ENST00000444415 ANKLE2Q86XL3 938 aa32.96■■■□□ 2.87
TRAF4-205ENST00000444415 IQGAP1P46940 1657 aa32.95■■■□□ 2.86
TRAF4-205ENST00000444415 SPHKAPQ2M3C7 1700 aa32.94■■■□□ 2.86
TRAF4-205ENST00000444415 SLC52A1Q9NWF4 448 aa32.93■■■□□ 2.86
TRAF4-205ENST00000444415 NPHP4O75161 1426 aaPredicted RBP32.92■■■□□ 2.86
TRAF4-205ENST00000444415 TMEM131LA2VDJ0 1609 aa32.92■■■□□ 2.86
TRAF4-205ENST00000444415 LTKP29376 864 aa32.92■■■□□ 2.86
TRAF4-205ENST00000444415 SCAF11Q99590 1463 aaKnown RBP32.91■■■□□ 2.86
TRAF4-205ENST00000444415 TMEM2Q9UHN6 1383 aa32.91■■■□□ 2.86
TRAF4-205ENST00000444415 ZNF335Q9H4Z2 1342 aaPredicted RBP32.91■■■□□ 2.86
TRAF4-205ENST00000444415 CERKQ8TCT0 537 aa32.89■■■□□ 2.86
TRAF4-205ENST00000444415 ILDR1Q86SU0 546 aaPredicted RBP32.87■■■□□ 2.85
TRAF4-205ENST00000444415 STAG3Q9UJ98 1225 aa32.83■■■□□ 2.85
TRAF4-205ENST00000444415 ZFYVE9O95405 1425 aa32.82■■■□□ 2.84
TRAF4-205ENST00000444415 TXNDC2Q86VQ3 553 aa32.81■■■□□ 2.84
TRAF4-205ENST00000444415 TRIM52Q96A61 297 aa32.81■■■□□ 2.84
TRAF4-205ENST00000444415 TRPM2O94759 1503 aa32.8■■■□□ 2.84
TRAF4-205ENST00000444415 CLTCL1P53675 1640 aa32.79■■■□□ 2.84
TRAF4-205ENST00000444415 STRCP1A6NGW2 1772 aa32.79■■■□□ 2.84
TRAF4-205ENST00000444415 SETD5Q9C0A6 1442 aa32.78■■■□□ 2.84
TRAF4-205ENST00000444415 FBXO41Q8TF61 875 aa32.76■■■□□ 2.84
TRAF4-205ENST00000444415 SLC4A1APQ9BWU0 796 aaKnown RBP32.73■■■□□ 2.83
TRAF4-205ENST00000444415 EID1Q9Y6B2 187 aa32.73■■■□□ 2.83
TRAF4-205ENST00000444415 RIMS2Q9UQ26 1411 aa32.72■■■□□ 2.83
TRAF4-205ENST00000444415 RAB3GAP2Q9H2M9 1393 aa32.7■■■□□ 2.83
TRAF4-205ENST00000444415 IQSEC2Q5JU85 1478 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms