RNA–Protein interactions for RNA: ENST00000444131.2

TMED4-202, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 4

Gene TMED4, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-202ENST00000444131 IQSEC2Q5JU85 1478 aa29.53■■■□□ 2.32
TMED4-202ENST00000444131 LTBP4Q8N2S1 1624 aa29.53■■■□□ 2.32
TMED4-202ENST00000444131 KDM5DQ9BY66 1539 aa29.52■■■□□ 2.32
TMED4-202ENST00000444131 A2ML1A8K2U0 1454 aa29.49■■■□□ 2.31
TMED4-202ENST00000444131 TCOF1Q13428 1488 aaKnown RBP29.48■■■□□ 2.31
TMED4-202ENST00000444131 MIA2Q96PC5 1412 aa29.48■■■□□ 2.31
TMED4-202ENST00000444131 MAST1Q9Y2H9 1570 aa29.47■■■□□ 2.31
TMED4-202ENST00000444131 WASHC2CQ9Y4E1 1318 aa29.47■■■□□ 2.31
TMED4-202ENST00000444131 PZPP20742 1482 aa29.47■■■□□ 2.31
TMED4-202ENST00000444131 NCKAP5LQ9HCH0 1330 aa29.46■■■□□ 2.31
TMED4-202ENST00000444131 MYOM3Q5VTT5 1437 aa29.45■■■□□ 2.3
TMED4-202ENST00000444131 TNRQ92752 1358 aa29.43■■■□□ 2.3
TMED4-202ENST00000444131 DNMT1P26358 1616 aaKnown RBP29.43■■■□□ 2.3
TMED4-202ENST00000444131 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
TMED4-202ENST00000444131 RNF17Q9BXT8 1623 aaKnown RBP29.39■■■□□ 2.3
TMED4-202ENST00000444131 EIF2AK4Q9P2K8 1649 aaKnown RBP29.39■■■□□ 2.3
TMED4-202ENST00000444131 FBXO31Q5XUX0 539 aaPredicted RBP29.38■■■□□ 2.29
TMED4-202ENST00000444131 ZC3H13Q5T200 1668 aaKnown RBP29.37■■■□□ 2.29
TMED4-202ENST00000444131 APLP2Q06481 763 aa29.36■■■□□ 2.29
TMED4-202ENST00000444131 NLRP1Q9C000 1473 aa29.35■■■□□ 2.29
TMED4-202ENST00000444131 ZNF335Q9H4Z2 1342 aaPredicted RBP29.34■■■□□ 2.29
TMED4-202ENST00000444131 POLR1AO95602 1720 aaPredicted RBP29.34■■■□□ 2.29
TMED4-202ENST00000444131 THEMISQ8N1K5 641 aaPredicted RBP29.3■■■□□ 2.28
TMED4-202ENST00000444131 ABCC3O15438 1527 aa29.3■■■□□ 2.28
TMED4-202ENST00000444131 DUOX2Q9NRD8 1548 aa29.3■■■□□ 2.28
TMED4-202ENST00000444131 UGGT1Q9NYU2 1555 aa29.27■■■□□ 2.28
TMED4-202ENST00000444131 SHANK2Q9UPX8 1470 aa29.27■■■□□ 2.28
TMED4-202ENST00000444131 ANKLE2Q86XL3 938 aa29.26■■■□□ 2.27
TMED4-202ENST00000444131 SPATA31D1Q6ZQQ2 1576 aa29.25■■■□□ 2.27
TMED4-202ENST00000444131 NEURL4Q96JN8 1562 aa29.24■■■□□ 2.27
TMED4-202ENST00000444131 CROCC2H7BZ55 1655 aa29.24■■■□□ 2.27
TMED4-202ENST00000444131 MROH1Q8NDA8 1641 aa29.23■■■□□ 2.27
TMED4-202ENST00000444131 PTPN23Q9H3S7 1636 aa29.23■■■□□ 2.27
TMED4-202ENST00000444131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.23■■■□□ 2.276e-7■■□□□ 11.8
TMED4-202ENST00000444131 DEPDC5O75140 1603 aa29.21■■■□□ 2.27
TMED4-202ENST00000444131 ERBINQ96RT1 1412 aa29.2■■■□□ 2.27
TMED4-202ENST00000444131 KIF15Q9NS87 1388 aa29.2■■■□□ 2.26
TMED4-202ENST00000444131 ABCC5O15440 1437 aa29.2■■■□□ 2.26
TMED4-202ENST00000444131 CPS1P31327 1500 aa29.19■■■□□ 2.26
TMED4-202ENST00000444131 MED14O60244 1454 aa29.18■■■□□ 2.26
TMED4-202ENST00000444131 ERVK-7P63135 1459 aa29.18■■■□□ 2.26
TMED4-202ENST00000444131 CEP152O94986 1710 aa29.18■■■□□ 2.26
TMED4-202ENST00000444131 UBAP1LF5GYI3 381 aa29.18■■■□□ 2.26
TMED4-202ENST00000444131 FGD6Q6ZV73 1430 aa29.17■■■□□ 2.26
TMED4-202ENST00000444131 PRDM15P57071 1507 aaPredicted RBP29.16■■■□□ 2.26
TMED4-202ENST00000444131 DAPK1P53355 1430 aa29.16■■■□□ 2.26
TMED4-202ENST00000444131 DISP3Q9P2K9 1392 aa29.14■■■□□ 2.26
TMED4-202ENST00000444131 NPHP4O75161 1426 aaPredicted RBP29.14■■■□□ 2.26
TMED4-202ENST00000444131 ARHGAP31Q2M1Z3 1444 aa29.13■■■□□ 2.25
TMED4-202ENST00000444131 RRP7BPQ9NSQ0 103 aa29.12■■■□□ 2.25
TMED4-202ENST00000444131 CFAP65Q6ZU64 1925 aaKnown RBP29.11■■■□□ 2.25
TMED4-202ENST00000444131 IQGAP1P46940 1657 aa29.09■■■□□ 2.25
TMED4-202ENST00000444131 KANK1Q14678 1352 aa29.09■■■□□ 2.25
TMED4-202ENST00000444131 ANKRD30AQ9BXX3 1397 aa29.09■■■□□ 2.25
TMED4-202ENST00000444131 VWDEQ8N2E2 1590 aa29.07■■■□□ 2.24
TMED4-202ENST00000444131 UBR1Q8IWV7 1749 aa29.06■■■□□ 2.24
TMED4-202ENST00000444131 TOM1O60784 492 aa29.04■■■□□ 2.24
TMED4-202ENST00000444131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.01■■■□□ 2.234e-8■□□□□ 8.8
TMED4-202ENST00000444131 LMTK2Q8IWU2 1503 aa28.99■■■□□ 2.23
TMED4-202ENST00000444131 SCAF11Q99590 1463 aaKnown RBP28.98■■■□□ 2.23
TMED4-202ENST00000444131 CHIC2Q9UKJ5 165 aa28.98■■■□□ 2.23
TMED4-202ENST00000444131 SLIT1O75093 1534 aa28.98■■■□□ 2.23
TMED4-202ENST00000444131 ARHGAP23Q9P227 1491 aa28.97■■■□□ 2.23
TMED4-202ENST00000444131 ADGRL2O95490 1459 aa28.97■■■□□ 2.23
TMED4-202ENST00000444131 KDM5AP29375 1690 aaKnown RBP28.93■■■□□ 2.22
TMED4-202ENST00000444131 SYNMO15061 1565 aa28.93■■■□□ 2.22
TMED4-202ENST00000444131 EID1Q9Y6B2 187 aa28.93■■■□□ 2.22
TMED4-202ENST00000444131 SCAF1Q9H7N4 1312 aaKnown RBP28.93■■■□□ 2.22
TMED4-202ENST00000444131 TXNDC2Q86VQ3 553 aa28.92■■■□□ 2.22
TMED4-202ENST00000444131 PIK3C2BO00750 1634 aa28.91■■■□□ 2.22
TMED4-202ENST00000444131 ILDR2Q71H61 639 aa28.91■■■□□ 2.22
TMED4-202ENST00000444131 PIP4K2BP78356 416 aa28.9■■■□□ 2.22
TMED4-202ENST00000444131 FAM50AQ14320 339 aaKnown RBP28.9■■■□□ 2.22
TMED4-202ENST00000444131 STRCP1A6NGW2 1772 aa28.89■■■□□ 2.22
TMED4-202ENST00000444131 STAG3Q9UJ98 1225 aa28.89■■■□□ 2.22
TMED4-202ENST00000444131 LTKP29376 864 aa28.88■■■□□ 2.21
TMED4-202ENST00000444131 EFCAB6Q5THR3 1501 aa28.88■■■□□ 2.21
TMED4-202ENST00000444131 LRRC7Q96NW7 1537 aa28.88■■■□□ 2.21
TMED4-202ENST00000444131 TMEM2Q9UHN6 1383 aa28.87■■■□□ 2.21
TMED4-202ENST00000444131 HSPA1LP34931 641 aa28.85■■■□□ 2.21
TMED4-202ENST00000444131 ANKRD50Q9ULJ7 1429 aa28.85■■■□□ 2.21
TMED4-202ENST00000444131 SOCS7O14512 581 aa28.84■■■□□ 2.21
TMED4-202ENST00000444131 NOS1P29475 1434 aa28.84■■■□□ 2.21
TMED4-202ENST00000444131 IDI1Q13907 227 aa28.83■■■□□ 2.21
TMED4-202ENST00000444131 RPRD2Q5VT52 1461 aaKnown RBP28.83■■■□□ 2.21
TMED4-202ENST00000444131 SLC52A1Q9NWF4 448 aa28.81■■■□□ 2.2
TMED4-202ENST00000444131 ALKQ9UM73 1620 aa28.8■■■□□ 2.2
TMED4-202ENST00000444131 ADGRB3O60242 1522 aa28.77■■■□□ 2.2
TMED4-202ENST00000444131 TET3O43151 1660 aa28.75■■■□□ 2.19
TMED4-202ENST00000444131 ROCK1Q13464 1354 aa28.72■■■□□ 2.19
TMED4-202ENST00000444131 GCC2Q8IWJ2 1684 aa28.71■■■□□ 2.19
TMED4-202ENST00000444131 UNC13BO14795 1591 aa28.71■■■□□ 2.19
TMED4-202ENST00000444131 MED1Q15648 1581 aaPredicted RBP28.7■■■□□ 2.18
TMED4-202ENST00000444131 XIRP1Q702N8 1843 aaKnown RBP28.69■■■□□ 2.18
TMED4-202ENST00000444131 KCNA6P17658 529 aa28.67■■■□□ 2.18
TMED4-202ENST00000444131 HDGFP51858 240 aaKnown RBP28.66■■■□□ 2.18
TMED4-202ENST00000444131 SLC26A8Q96RN1 970 aa28.62■■■□□ 2.17
TMED4-202ENST00000444131 TMEM94Q12767 1356 aa28.61■■■□□ 2.17
TMED4-202ENST00000444131 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
TMED4-202ENST00000444131 IQGAP3Q86VI3 1631 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms