RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 EIF2AK4Q9P2K8 1649 aaKnown RBP28.22■■■□□ 2.11
SMPD4-210ENST00000441135 STRCQ7RTU9 1775 aa28.22■■■□□ 2.11
SMPD4-210ENST00000441135 ABCC5O15440 1437 aa28.22■■■□□ 2.11
SMPD4-210ENST00000441135 RNF17Q9BXT8 1623 aaKnown RBP28.21■■■□□ 2.11
SMPD4-210ENST00000441135 WASHC2CQ9Y4E1 1318 aa28.21■■■□□ 2.11
SMPD4-210ENST00000441135 CROCC2H7BZ55 1655 aa28.2■■■□□ 2.11
SMPD4-210ENST00000441135 NCOA1Q15788 1441 aa28.2■■■□□ 2.11
SMPD4-210ENST00000441135 DUOX2Q9NRD8 1548 aa28.2■■■□□ 2.1
SMPD4-210ENST00000441135 PZPP20742 1482 aa28.2■■■□□ 2.1
SMPD4-210ENST00000441135 ZNF142P52746 1687 aaPredicted RBP28.19■■■□□ 2.1
SMPD4-210ENST00000441135 DAPK1P53355 1430 aa28.18■■■□□ 2.1
SMPD4-210ENST00000441135 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
SMPD4-210ENST00000441135 PTPRTO14522 1441 aa28.18■■■□□ 2.1
SMPD4-210ENST00000441135 CEP170BQ9Y4F5 1589 aaPredicted RBP28.17■■■□□ 2.1
SMPD4-210ENST00000441135 FBXO41Q8TF61 875 aa28.17■■■□□ 2.1
SMPD4-210ENST00000441135 KIF15Q9NS87 1388 aa28.16■■■□□ 2.1
SMPD4-210ENST00000441135 CAMSAP1Q5T5Y3 1602 aa28.15■■■□□ 2.1
SMPD4-210ENST00000441135 ERBINQ96RT1 1412 aa28.13■■■□□ 2.09
SMPD4-210ENST00000441135 PLA2R1Q13018 1463 aa28.13■■■□□ 2.09
SMPD4-210ENST00000441135 ZC3H13Q5T200 1668 aaKnown RBP28.13■■■□□ 2.09
SMPD4-210ENST00000441135 TNRQ92752 1358 aa28.12■■■□□ 2.09
SMPD4-210ENST00000441135 A2ML1A8K2U0 1454 aa28.12■■■□□ 2.09
SMPD4-210ENST00000441135 ABCC3O15438 1527 aa28.12■■■□□ 2.09
SMPD4-210ENST00000441135 MROH1Q8NDA8 1641 aa28.1■■■□□ 2.09
SMPD4-210ENST00000441135 FBXO31Q5XUX0 539 aaPredicted RBP28.08■■■□□ 2.09
SMPD4-210ENST00000441135 RRP7BPQ9NSQ0 103 aa28.08■■■□□ 2.09
SMPD4-210ENST00000441135 ANKRD30AQ9BXX3 1397 aa28.08■■■□□ 2.09
SMPD4-210ENST00000441135 CERKQ8TCT0 537 aa28.07■■■□□ 2.08
SMPD4-210ENST00000441135 PRDM15P57071 1507 aaPredicted RBP28.05■■■□□ 2.08
SMPD4-210ENST00000441135 NLRP1Q9C000 1473 aa28.04■■■□□ 2.08
SMPD4-210ENST00000441135 PKD2Q13563 968 aa28.04■■■□□ 2.08
SMPD4-210ENST00000441135 FAM50AQ14320 339 aaKnown RBP28.02■■■□□ 2.08
SMPD4-210ENST00000441135 ADGRL2O95490 1459 aa28.01■■■□□ 2.07
SMPD4-210ENST00000441135 NCKAP5LQ9HCH0 1330 aa28■■■□□ 2.07
SMPD4-210ENST00000441135 CHIC2Q9UKJ5 165 aa28■■■□□ 2.07
SMPD4-210ENST00000441135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.99■■■□□ 2.07
SMPD4-210ENST00000441135 SPATA31D1Q6ZQQ2 1576 aa27.99■■■□□ 2.07
SMPD4-210ENST00000441135 DEPDC5O75140 1603 aa27.98■■■□□ 2.07
SMPD4-210ENST00000441135 ERVK-7P63135 1459 aa27.97■■■□□ 2.07
SMPD4-210ENST00000441135 CEP152O94986 1710 aa27.96■■■□□ 2.07
SMPD4-210ENST00000441135 KANK1Q14678 1352 aa27.96■■■□□ 2.07
SMPD4-210ENST00000441135 ARHGAP31Q2M1Z3 1444 aa27.95■■■□□ 2.07
SMPD4-210ENST00000441135 UGGT1Q9NYU2 1555 aa27.93■■■□□ 2.06
SMPD4-210ENST00000441135 THEMISQ8N1K5 641 aaPredicted RBP27.92■■■□□ 2.06
SMPD4-210ENST00000441135 LTBP4Q8N2S1 1624 aa27.92■■■□□ 2.06
SMPD4-210ENST00000441135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.91■■■□□ 2.066e-9■■■□□ 16.9
SMPD4-210ENST00000441135 RRBP1Q9P2E9 1410 aaKnown RBP27.9■■■□□ 2.06
SMPD4-210ENST00000441135 PPARGC1BQ86YN6 1023 aaKnown RBP27.89■■■□□ 2.06
SMPD4-210ENST00000441135 LMTK2Q8IWU2 1503 aa27.88■■■□□ 2.05
SMPD4-210ENST00000441135 VWDEQ8N2E2 1590 aa27.87■■■□□ 2.05
SMPD4-210ENST00000441135 ANKRD50Q9ULJ7 1429 aa27.87■■■□□ 2.05
SMPD4-210ENST00000441135 POLR1AO95602 1720 aaPredicted RBP27.87■■■□□ 2.05
SMPD4-210ENST00000441135 IQSEC2Q5JU85 1478 aa27.85■■■□□ 2.05
SMPD4-210ENST00000441135 ANKLE2Q86XL3 938 aa27.85■■■□□ 2.05
SMPD4-210ENST00000441135 NEURL4Q96JN8 1562 aa27.84■■■□□ 2.05
SMPD4-210ENST00000441135 ROCK1Q13464 1354 aa27.83■■■□□ 2.05
SMPD4-210ENST00000441135 ZNF335Q9H4Z2 1342 aaPredicted RBP27.82■■■□□ 2.04
SMPD4-210ENST00000441135 EFCAB6Q5THR3 1501 aa27.79■■■□□ 2.04
SMPD4-210ENST00000441135 MED14O60244 1454 aa27.79■■■□□ 2.04
SMPD4-210ENST00000441135 NPHP4O75161 1426 aaPredicted RBP27.76■■■□□ 2.04
SMPD4-210ENST00000441135 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
SMPD4-210ENST00000441135 CFAP65Q6ZU64 1925 aaKnown RBP27.73■■■□□ 2.03
SMPD4-210ENST00000441135 RPRD2Q5VT52 1461 aaKnown RBP27.72■■■□□ 2.03
SMPD4-210ENST00000441135 UNC13BO14795 1591 aa27.71■■■□□ 2.03
SMPD4-210ENST00000441135 NOS1P29475 1434 aa27.71■■■□□ 2.03
SMPD4-210ENST00000441135 SLIT1O75093 1534 aa27.7■■■□□ 2.02
SMPD4-210ENST00000441135 ARHGAP23Q9P227 1491 aa27.7■■■□□ 2.02
SMPD4-210ENST00000441135 IQGAP1P46940 1657 aa27.69■■■□□ 2.02
SMPD4-210ENST00000441135 SCAF11Q99590 1463 aaKnown RBP27.69■■■□□ 2.02
SMPD4-210ENST00000441135 CPS1P31327 1500 aa27.68■■■□□ 2.02
SMPD4-210ENST00000441135 PIK3C2BO00750 1634 aa27.68■■■□□ 2.02
SMPD4-210ENST00000441135 SYNMO15061 1565 aa27.68■■■□□ 2.02
SMPD4-210ENST00000441135 ITGAEP38570 1179 aa27.67■■■□□ 2.02
SMPD4-210ENST00000441135 TET3O43151 1660 aa27.67■■■□□ 2.02
SMPD4-210ENST00000441135 KDM5AP29375 1690 aaKnown RBP27.67■■■□□ 2.02
SMPD4-210ENST00000441135 STAG3Q9UJ98 1225 aa27.65■■■□□ 2.02
SMPD4-210ENST00000441135 TMEM2Q9UHN6 1383 aa27.63■■■□□ 2.01
SMPD4-210ENST00000441135 IDI1Q13907 227 aa27.63■■■□□ 2.01
SMPD4-210ENST00000441135 SLC52A1Q9NWF4 448 aa27.63■■■□□ 2.01
SMPD4-210ENST00000441135 EID1Q9Y6B2 187 aa27.62■■■□□ 2.01
SMPD4-210ENST00000441135 TXNDC2Q86VQ3 553 aa27.61■■■□□ 2.01
SMPD4-210ENST00000441135 GCC2Q8IWJ2 1684 aa27.61■■■□□ 2.01
SMPD4-210ENST00000441135 ADGRB3O60242 1522 aa27.6■■■□□ 2.01
SMPD4-210ENST00000441135 IQGAP3Q86VI3 1631 aa27.59■■■□□ 2.01
SMPD4-210ENST00000441135 LTKP29376 864 aa27.59■■■□□ 2.01
SMPD4-210ENST00000441135 UBAP1LF5GYI3 381 aa27.56■■■□□ 2
SMPD4-210ENST00000441135 NUP155O75694 1391 aa27.55■■■□□ 2
SMPD4-210ENST00000441135 HFM1A2PYH4 1435 aa27.51■■□□□ 1.99
SMPD4-210ENST00000441135 E9PCH4 1651 aa27.51■■□□□ 1.99
SMPD4-210ENST00000441135 NAIPQ13075 1403 aa27.5■■□□□ 1.99
SMPD4-210ENST00000441135 LRRC7Q96NW7 1537 aa27.45■■□□□ 1.98
SMPD4-210ENST00000441135 TOM1O60784 492 aa27.44■■□□□ 1.98
SMPD4-210ENST00000441135 STRCP1A6NGW2 1772 aa27.44■■□□□ 1.98
SMPD4-210ENST00000441135 TMEM131LA2VDJ0 1609 aa27.44■■□□□ 1.98
SMPD4-210ENST00000441135 ZFYVE9O95405 1425 aa27.42■■□□□ 1.98
SMPD4-210ENST00000441135 HDGFP51858 240 aaKnown RBP27.41■■□□□ 1.98
SMPD4-210ENST00000441135 RIMS2Q9UQ26 1411 aa27.4■■□□□ 1.98
SMPD4-210ENST00000441135 PLEKHG1Q9ULL1 1385 aa27.37■■□□□ 1.97
SMPD4-210ENST00000441135 PPP1R15AO75807 674 aaPredicted RBP27.36■■□□□ 1.97
SMPD4-210ENST00000441135 CHGAP10645 457 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms