RNA–Protein interactions for RNA: ENST00000440234.6

RBM38-205, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-205ENST00000440234 FBXO31Q5XUX0 539 aaPredicted RBP34.49■■■■□ 3.11
RBM38-205ENST00000440234 PKD2Q13563 968 aa34.47■■■■□ 3.11
RBM38-205ENST00000440234 MYO3AQ8NEV4 1616 aa34.46■■■■□ 3.11
RBM38-205ENST00000440234 CEP170BQ9Y4F5 1589 aaPredicted RBP34.45■■■■□ 3.11
RBM38-205ENST00000440234 PLA2R1Q13018 1463 aa34.44■■■■□ 3.1
RBM38-205ENST00000440234 FAM135AQ9P2D6 1515 aa34.44■■■■□ 3.1
RBM38-205ENST00000440234 KDM5DQ9BY66 1539 aa34.43■■■■□ 3.1
RBM38-205ENST00000440234 ZNF142P52746 1687 aaPredicted RBP34.42■■■■□ 3.1
RBM38-205ENST00000440234 MAST1Q9Y2H9 1570 aa34.41■■■■□ 3.1
RBM38-205ENST00000440234 TNRQ92752 1358 aa34.41■■■■□ 3.1
RBM38-205ENST00000440234 A2ML1A8K2U0 1454 aa34.4■■■■□ 3.1
RBM38-205ENST00000440234 PZPP20742 1482 aa34.4■■■■□ 3.1
RBM38-205ENST00000440234 LTBP4Q8N2S1 1624 aa34.39■■■■□ 3.1
RBM38-205ENST00000440234 TCOF1Q13428 1488 aaKnown RBP34.38■■■■□ 3.09
RBM38-205ENST00000440234 DNMT1P26358 1616 aaKnown RBP34.31■■■■□ 3.08
RBM38-205ENST00000440234 ZNF335Q9H4Z2 1342 aaPredicted RBP34.3■■■■□ 3.08
RBM38-205ENST00000440234 ABCC5O15440 1437 aa34.28■■■■□ 3.08
RBM38-205ENST00000440234 THEMISQ8N1K5 641 aaPredicted RBP34.27■■■■□ 3.08
RBM38-205ENST00000440234 RNF17Q9BXT8 1623 aaKnown RBP34.26■■■■□ 3.08
RBM38-205ENST00000440234 IQSEC2Q5JU85 1478 aa34.26■■■■□ 3.07
RBM38-205ENST00000440234 DUOX2Q9NRD8 1548 aa34.25■■■■□ 3.07
RBM38-205ENST00000440234 EIF2AK4Q9P2K8 1649 aaKnown RBP34.23■■■■□ 3.07
RBM38-205ENST00000440234 NLRP1Q9C000 1473 aa34.23■■■■□ 3.07
RBM38-205ENST00000440234 RRP7BPQ9NSQ0 103 aa34.23■■■■□ 3.07
RBM38-205ENST00000440234 ABCC3O15438 1527 aa34.23■■■■□ 3.07
RBM38-205ENST00000440234 ANKLE2Q86XL3 938 aa34.22■■■■□ 3.07
RBM38-205ENST00000440234 KIF15Q9NS87 1388 aa34.22■■■■□ 3.07
RBM38-205ENST00000440234 PTPN23Q9H3S7 1636 aa34.21■■■■□ 3.07
RBM38-205ENST00000440234 FGD6Q6ZV73 1430 aa34.21■■■■□ 3.07
RBM38-205ENST00000440234 SHANK2Q9UPX8 1470 aa34.2■■■■□ 3.07
RBM38-205ENST00000440234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.2■■■■□ 3.071e-6■■■□□ 15.6
RBM38-205ENST00000440234 DAPK1P53355 1430 aa34.17■■■■□ 3.06
RBM38-205ENST00000440234 MROH1Q8NDA8 1641 aa34.15■■■■□ 3.06
RBM38-205ENST00000440234 ZC3H13Q5T200 1668 aaKnown RBP34.15■■■■□ 3.06
RBM38-205ENST00000440234 UGGT1Q9NYU2 1555 aa34.14■■■■□ 3.06
RBM38-205ENST00000440234 ERBINQ96RT1 1412 aa34.13■■■■□ 3.05
RBM38-205ENST00000440234 SPATA31D1Q6ZQQ2 1576 aa34.11■■■■□ 3.05
RBM38-205ENST00000440234 CHIC2Q9UKJ5 165 aa34.11■■■■□ 3.05
RBM38-205ENST00000440234 ERVK-7P63135 1459 aa34.11■■■■□ 3.05
RBM38-205ENST00000440234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.09■■■■□ 3.05
RBM38-205ENST00000440234 NEURL4Q96JN8 1562 aa34.08■■■■□ 3.05
RBM38-205ENST00000440234 ANKRD30AQ9BXX3 1397 aa34.08■■■■□ 3.05
RBM38-205ENST00000440234 CROCC2H7BZ55 1655 aa34.07■■■■□ 3.04
RBM38-205ENST00000440234 UBAP1LF5GYI3 381 aa34.07■■■■□ 3.04
RBM38-205ENST00000440234 ARHGAP31Q2M1Z3 1444 aa34.04■■■■□ 3.04
RBM38-205ENST00000440234 MED14O60244 1454 aa34.04■■■■□ 3.04
RBM38-205ENST00000440234 POLR1AO95602 1720 aaPredicted RBP34.04■■■■□ 3.04
RBM38-205ENST00000440234 PRDM15P57071 1507 aaPredicted RBP34.03■■■■□ 3.04
RBM38-205ENST00000440234 NPHP4O75161 1426 aaPredicted RBP34.03■■■■□ 3.04
RBM38-205ENST00000440234 CEP152O94986 1710 aa34.01■■■■□ 3.04
RBM38-205ENST00000440234 KANK1Q14678 1352 aa34.01■■■■□ 3.04
RBM38-205ENST00000440234 FAM50AQ14320 339 aaKnown RBP34■■■■□ 3.03
RBM38-205ENST00000440234 DEPDC5O75140 1603 aa33.97■■■■□ 3.03
RBM38-205ENST00000440234 CPS1P31327 1500 aa33.95■■■■□ 3.03
RBM38-205ENST00000440234 CFAP65Q6ZU64 1925 aaKnown RBP33.94■■■■□ 3.02
RBM38-205ENST00000440234 PPARGC1BQ86YN6 1023 aaKnown RBP33.93■■■■□ 3.02
RBM38-205ENST00000440234 VWDEQ8N2E2 1590 aa33.9■■■■□ 3.02
RBM38-205ENST00000440234 ADGRL2O95490 1459 aa33.9■■■■□ 3.02
RBM38-205ENST00000440234 DISP3Q9P2K9 1392 aa33.9■■■■□ 3.02
RBM38-205ENST00000440234 LTKP29376 864 aa33.88■■■■□ 3.01
RBM38-205ENST00000440234 TXNDC2Q86VQ3 553 aa33.88■■■■□ 3.01
RBM38-205ENST00000440234 LMTK2Q8IWU2 1503 aa33.87■■■■□ 3.01
RBM38-205ENST00000440234 TOM1O60784 492 aa33.86■■■■□ 3.01
RBM38-205ENST00000440234 UBR1Q8IWV7 1749 aa33.86■■■■□ 3.01
RBM38-205ENST00000440234 IQGAP1P46940 1657 aa33.85■■■■□ 3.01
RBM38-205ENST00000440234 STAG3Q9UJ98 1225 aa33.84■■■■□ 3.01
RBM38-205ENST00000440234 SCAF11Q99590 1463 aaKnown RBP33.83■■■■□ 3.01
RBM38-205ENST00000440234 ARHGAP23Q9P227 1491 aa33.83■■■■□ 3.01
RBM38-205ENST00000440234 IDI1Q13907 227 aa33.83■■■■□ 3.01
RBM38-205ENST00000440234 EID1Q9Y6B2 187 aa33.83■■■■□ 3.01
RBM38-205ENST00000440234 ANKRD50Q9ULJ7 1429 aa33.82■■■■□ 3
RBM38-205ENST00000440234 SLIT1O75093 1534 aa33.82■■■■□ 3
RBM38-205ENST00000440234 PIP4K2BP78356 416 aa33.79■■■■□ 3
RBM38-205ENST00000440234 TMEM2Q9UHN6 1383 aa33.78■■■■□ 3
RBM38-205ENST00000440234 SCAF1Q9H7N4 1312 aaKnown RBP33.78■■■■□ 3
RBM38-205ENST00000440234 NOS1P29475 1434 aa33.76■■■□□ 2.99
RBM38-205ENST00000440234 SLC52A1Q9NWF4 448 aa33.74■■■□□ 2.99
RBM38-205ENST00000440234 PIK3C2BO00750 1634 aa33.74■■■□□ 2.99
RBM38-205ENST00000440234 ILDR2Q71H61 639 aa33.73■■■□□ 2.99
RBM38-205ENST00000440234 EFCAB6Q5THR3 1501 aa33.72■■■□□ 2.99
RBM38-205ENST00000440234 LRRC7Q96NW7 1537 aa33.71■■■□□ 2.99
RBM38-205ENST00000440234 HSPA1LP34931 641 aa33.7■■■□□ 2.99
RBM38-205ENST00000440234 SYNMO15061 1565 aa33.68■■■□□ 2.98
RBM38-205ENST00000440234 STRCP1A6NGW2 1772 aa33.67■■■□□ 2.98
RBM38-205ENST00000440234 ROCK1Q13464 1354 aa33.66■■■□□ 2.98
RBM38-205ENST00000440234 RPRD2Q5VT52 1461 aaKnown RBP33.66■■■□□ 2.98
RBM38-205ENST00000440234 KDM5AP29375 1690 aaKnown RBP33.64■■■□□ 2.98
RBM38-205ENST00000440234 ITGAEP38570 1179 aa33.59■■■□□ 2.97
RBM38-205ENST00000440234 ALKQ9UM73 1620 aa33.59■■■□□ 2.97
RBM38-205ENST00000440234 SLC26A8Q96RN1 970 aa33.57■■■□□ 2.96
RBM38-205ENST00000440234 ADGRB3O60242 1522 aa33.56■■■□□ 2.96
RBM38-205ENST00000440234 TET3O43151 1660 aa33.55■■■□□ 2.96
RBM38-205ENST00000440234 KCNA6P17658 529 aa33.54■■■□□ 2.96
RBM38-205ENST00000440234 RRBP1Q9P2E9 1410 aaKnown RBP33.53■■■□□ 2.96
RBM38-205ENST00000440234 UNC13BO14795 1591 aa33.52■■■□□ 2.96
RBM38-205ENST00000440234 HDGFP51858 240 aaKnown RBP33.52■■■□□ 2.96
RBM38-205ENST00000440234 BCANQ96GW7 911 aa33.51■■■□□ 2.95
RBM38-205ENST00000440234 SOCS7O14512 581 aa33.5■■■□□ 2.95
RBM38-205ENST00000440234 NUP155O75694 1391 aa33.48■■■□□ 2.95
RBM38-205ENST00000440234 CHGAP10645 457 aaKnown RBP33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms