RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DAPK1P53355 1430 aa27.29■■□□□ 1.96
CCDC188-201ENST00000439765 MYO3AQ8NEV4 1616 aa27.29■■□□□ 1.96
CCDC188-201ENST00000439765 ABCC5O15440 1437 aa27.28■■□□□ 1.96
CCDC188-201ENST00000439765 GGT6Q6P531 493 aa27.27■■□□□ 1.96
CCDC188-201ENST00000439765 PTPRKQ15262 1439 aa27.25■■□□□ 1.95
CCDC188-201ENST00000439765 FAM50AQ14320 339 aaKnown RBP27.24■■□□□ 1.95
CCDC188-201ENST00000439765 DMRT2Q9Y5R5 561 aa27.23■■□□□ 1.95
CCDC188-201ENST00000439765 KDM5DQ9BY66 1539 aa27.21■■□□□ 1.95
CCDC188-201ENST00000439765 NCOA1Q15788 1441 aa27.2■■□□□ 1.94
CCDC188-201ENST00000439765 CEP170BQ9Y4F5 1589 aaPredicted RBP27.2■■□□□ 1.94
CCDC188-201ENST00000439765 PTPRTO14522 1441 aa27.19■■□□□ 1.94
CCDC188-201ENST00000439765 CAMSAP1Q5T5Y3 1602 aa27.19■■□□□ 1.94
CCDC188-201ENST00000439765 RNF17Q9BXT8 1623 aaKnown RBP27.19■■□□□ 1.94
CCDC188-201ENST00000439765 EIF2AK4Q9P2K8 1649 aaKnown RBP27.19■■□□□ 1.94
CCDC188-201ENST00000439765 KIF3BO15066 747 aa27.18■■□□□ 1.94
CCDC188-201ENST00000439765 DUOX2Q9NRD8 1548 aa27.15■■□□□ 1.94
CCDC188-201ENST00000439765 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.94
CCDC188-201ENST00000439765 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
CCDC188-201ENST00000439765 CERKQ8TCT0 537 aa27.13■■□□□ 1.93
CCDC188-201ENST00000439765 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
CCDC188-201ENST00000439765 PZPP20742 1482 aa27.12■■□□□ 1.93
CCDC188-201ENST00000439765 PLA2R1Q13018 1463 aa27.12■■□□□ 1.93
CCDC188-201ENST00000439765 ADGRL2O95490 1459 aa27.09■■□□□ 1.93
CCDC188-201ENST00000439765 RRP7BPQ9NSQ0 103 aa27.08■■□□□ 1.93
CCDC188-201ENST00000439765 MROH1Q8NDA8 1641 aa27.08■■□□□ 1.93
CCDC188-201ENST00000439765 A2ML1A8K2U0 1454 aa27.08■■□□□ 1.93
CCDC188-201ENST00000439765 RRBP1Q9P2E9 1410 aaKnown RBP27.08■■□□□ 1.93
CCDC188-201ENST00000439765 ANKRD30AQ9BXX3 1397 aa27.08■■□□□ 1.92
CCDC188-201ENST00000439765 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
CCDC188-201ENST00000439765 ERBINQ96RT1 1412 aa27.05■■□□□ 1.92
CCDC188-201ENST00000439765 ABCC3O15438 1527 aa27.04■■□□□ 1.92
CCDC188-201ENST00000439765 LTBP4Q8N2S1 1624 aa27.04■■□□□ 1.92
CCDC188-201ENST00000439765 CEP152O94986 1710 aa27.04■■□□□ 1.92
CCDC188-201ENST00000439765 POLR1AO95602 1720 aaPredicted RBP27.04■■□□□ 1.92
CCDC188-201ENST00000439765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
CCDC188-201ENST00000439765 TNRQ92752 1358 aa27.03■■□□□ 1.92
CCDC188-201ENST00000439765 DEPDC5O75140 1603 aa27.01■■□□□ 1.92
CCDC188-201ENST00000439765 ITGAEP38570 1179 aa27.01■■□□□ 1.91
CCDC188-201ENST00000439765 CFAP65Q6ZU64 1925 aaKnown RBP27.01■■□□□ 1.91
CCDC188-201ENST00000439765 PKD2Q13563 968 aa26.99■■□□□ 1.91
CCDC188-201ENST00000439765 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
CCDC188-201ENST00000439765 PRDM15P57071 1507 aaPredicted RBP26.99■■□□□ 1.91
CCDC188-201ENST00000439765 SPATA31D1Q6ZQQ2 1576 aa26.98■■□□□ 1.91
CCDC188-201ENST00000439765 NLRP1Q9C000 1473 aa26.97■■□□□ 1.91
CCDC188-201ENST00000439765 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
CCDC188-201ENST00000439765 IQSEC2Q5JU85 1478 aa26.95■■□□□ 1.91
CCDC188-201ENST00000439765 ROCK1Q13464 1354 aa26.92■■□□□ 1.9
CCDC188-201ENST00000439765 NEURL4Q96JN8 1562 aa26.92■■□□□ 1.9
CCDC188-201ENST00000439765 ANKRD50Q9ULJ7 1429 aa26.91■■□□□ 1.9
CCDC188-201ENST00000439765 UGGT1Q9NYU2 1555 aa26.91■■□□□ 1.9
CCDC188-201ENST00000439765 ERVK-7P63135 1459 aa26.9■■□□□ 1.9
CCDC188-201ENST00000439765 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
CCDC188-201ENST00000439765 UNC13BO14795 1591 aa26.86■■□□□ 1.89
CCDC188-201ENST00000439765 ARHGAP31Q2M1Z3 1444 aa26.85■■□□□ 1.89
CCDC188-201ENST00000439765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.85■■□□□ 1.89
CCDC188-201ENST00000439765 UBR1Q8IWV7 1749 aa26.84■■□□□ 1.89
CCDC188-201ENST00000439765 VWDEQ8N2E2 1590 aa26.84■■□□□ 1.89
CCDC188-201ENST00000439765 ZNF335Q9H4Z2 1342 aaPredicted RBP26.83■■□□□ 1.89
CCDC188-201ENST00000439765 THEMISQ8N1K5 641 aaPredicted RBP26.81■■□□□ 1.88
CCDC188-201ENST00000439765 KANK1Q14678 1352 aa26.81■■□□□ 1.88
CCDC188-201ENST00000439765 MED14O60244 1454 aa26.79■■□□□ 1.88
CCDC188-201ENST00000439765 LMTK2Q8IWU2 1503 aa26.79■■□□□ 1.88
CCDC188-201ENST00000439765 IQGAP1P46940 1657 aa26.78■■□□□ 1.88
CCDC188-201ENST00000439765 ANKLE2Q86XL3 938 aa26.76■■□□□ 1.87
CCDC188-201ENST00000439765 EFCAB6Q5THR3 1501 aa26.76■■□□□ 1.87
CCDC188-201ENST00000439765 TET3O43151 1660 aa26.75■■□□□ 1.87
CCDC188-201ENST00000439765 IQGAP3Q86VI3 1631 aa26.74■■□□□ 1.87
CCDC188-201ENST00000439765 NAIPQ13075 1403 aa26.74■■□□□ 1.87
CCDC188-201ENST00000439765 KDM5AP29375 1690 aaKnown RBP26.73■■□□□ 1.87
CCDC188-201ENST00000439765 NPHP4O75161 1426 aaPredicted RBP26.72■■□□□ 1.87
CCDC188-201ENST00000439765 CPS1P31327 1500 aa26.72■■□□□ 1.87
CCDC188-201ENST00000439765 PIK3C2BO00750 1634 aa26.71■■□□□ 1.87
CCDC188-201ENST00000439765 HFM1A2PYH4 1435 aa26.7■■□□□ 1.86
CCDC188-201ENST00000439765 SLIT1O75093 1534 aa26.69■■□□□ 1.86
CCDC188-201ENST00000439765 ARHGAP23Q9P227 1491 aa26.68■■□□□ 1.86
CCDC188-201ENST00000439765 E9PCH4 1651 aa26.67■■□□□ 1.86
CCDC188-201ENST00000439765 SYNMO15061 1565 aa26.65■■□□□ 1.86
CCDC188-201ENST00000439765 STRCP1A6NGW2 1772 aa26.65■■□□□ 1.86
CCDC188-201ENST00000439765 SCAF11Q99590 1463 aaKnown RBP26.64■■□□□ 1.85
CCDC188-201ENST00000439765 NOS1P29475 1434 aa26.62■■□□□ 1.85
CCDC188-201ENST00000439765 NUP155O75694 1391 aa26.62■■□□□ 1.85
CCDC188-201ENST00000439765 RPRD2Q5VT52 1461 aaKnown RBP26.61■■□□□ 1.85
CCDC188-201ENST00000439765 UBAP1LF5GYI3 381 aa26.57■■□□□ 1.84
CCDC188-201ENST00000439765 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
CCDC188-201ENST00000439765 ADGRB3O60242 1522 aa26.55■■□□□ 1.84
CCDC188-201ENST00000439765 TMEM2Q9UHN6 1383 aa26.54■■□□□ 1.84
CCDC188-201ENST00000439765 LTKP29376 864 aa26.53■■□□□ 1.84
CCDC188-201ENST00000439765 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
CCDC188-201ENST00000439765 IDI1Q13907 227 aa26.52■■□□□ 1.84
CCDC188-201ENST00000439765 TXNDC2Q86VQ3 553 aa26.51■■□□□ 1.83
CCDC188-201ENST00000439765 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
CCDC188-201ENST00000439765 SLC52A1Q9NWF4 448 aa26.49■■□□□ 1.83
CCDC188-201ENST00000439765 EID1Q9Y6B2 187 aa26.49■■□□□ 1.83
CCDC188-201ENST00000439765 XIRP1Q702N8 1843 aaKnown RBP26.48■■□□□ 1.83
CCDC188-201ENST00000439765 STAG3Q9UJ98 1225 aa26.48■■□□□ 1.83
CCDC188-201ENST00000439765 ALKQ9UM73 1620 aa26.47■■□□□ 1.83
CCDC188-201ENST00000439765 TRIM52Q96A61 297 aa26.47■■□□□ 1.83
CCDC188-201ENST00000439765 TMEM131LA2VDJ0 1609 aa26.44■■□□□ 1.82
CCDC188-201ENST00000439765 TOM1O60784 492 aa26.44■■□□□ 1.82
CCDC188-201ENST00000439765 SETD5Q9C0A6 1442 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms