RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 KDM5DQ9BY66 1539 aa20.67■□□□□ 0.9
CDCA4P4-201ENST00000435216 FBXO31Q5XUX0 539 aaPredicted RBP20.66■□□□□ 0.9
CDCA4P4-201ENST00000435216 WASHC2CQ9Y4E1 1318 aa20.64■□□□□ 0.89
CDCA4P4-201ENST00000435216 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.89
CDCA4P4-201ENST00000435216 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
CDCA4P4-201ENST00000435216 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
CDCA4P4-201ENST00000435216 DNMT1P26358 1616 aaKnown RBP20.61■□□□□ 0.89
CDCA4P4-201ENST00000435216 A2ML1A8K2U0 1454 aa20.61■□□□□ 0.89
CDCA4P4-201ENST00000435216 PZPP20742 1482 aa20.61■□□□□ 0.89
CDCA4P4-201ENST00000435216 PLA2R1Q13018 1463 aa20.61■□□□□ 0.89
CDCA4P4-201ENST00000435216 TNRQ92752 1358 aa20.6■□□□□ 0.89
CDCA4P4-201ENST00000435216 APLP2Q06481 763 aa20.6■□□□□ 0.89
CDCA4P4-201ENST00000435216 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
CDCA4P4-201ENST00000435216 TCOF1Q13428 1488 aaKnown RBP20.59■□□□□ 0.89
CDCA4P4-201ENST00000435216 RNF17Q9BXT8 1623 aaKnown RBP20.58■□□□□ 0.89
CDCA4P4-201ENST00000435216 ZNF335Q9H4Z2 1342 aaPredicted RBP20.57■□□□□ 0.88
CDCA4P4-201ENST00000435216 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
CDCA4P4-201ENST00000435216 PKD2Q13563 968 aa20.56■□□□□ 0.88
CDCA4P4-201ENST00000435216 ABCC3O15438 1527 aa20.55■□□□□ 0.88
CDCA4P4-201ENST00000435216 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
CDCA4P4-201ENST00000435216 CROCC2H7BZ55 1655 aa20.54■□□□□ 0.88
CDCA4P4-201ENST00000435216 MROH1Q8NDA8 1641 aa20.54■□□□□ 0.88
CDCA4P4-201ENST00000435216 CEP152O94986 1710 aa20.53■□□□□ 0.88
CDCA4P4-201ENST00000435216 ABCC5O15440 1437 aa20.53■□□□□ 0.88
CDCA4P4-201ENST00000435216 ZC3H13Q5T200 1668 aaKnown RBP20.52■□□□□ 0.88
CDCA4P4-201ENST00000435216 POLR1AO95602 1720 aaPredicted RBP20.52■□□□□ 0.88
CDCA4P4-201ENST00000435216 DUOX2Q9NRD8 1548 aa20.52■□□□□ 0.87
CDCA4P4-201ENST00000435216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.87
CDCA4P4-201ENST00000435216 KIF15Q9NS87 1388 aa20.5■□□□□ 0.87
CDCA4P4-201ENST00000435216 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
CDCA4P4-201ENST00000435216 FGD6Q6ZV73 1430 aa20.5■□□□□ 0.87
CDCA4P4-201ENST00000435216 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
CDCA4P4-201ENST00000435216 DAPK1P53355 1430 aa20.49■□□□□ 0.87
CDCA4P4-201ENST00000435216 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
CDCA4P4-201ENST00000435216 UGGT1Q9NYU2 1555 aa20.48■□□□□ 0.87
CDCA4P4-201ENST00000435216 IQSEC2Q5JU85 1478 aa20.48■□□□□ 0.87
CDCA4P4-201ENST00000435216 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
CDCA4P4-201ENST00000435216 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
CDCA4P4-201ENST00000435216 SPATA31D1Q6ZQQ2 1576 aa20.46■□□□□ 0.87
CDCA4P4-201ENST00000435216 CHIC2Q9UKJ5 165 aa20.46■□□□□ 0.87
CDCA4P4-201ENST00000435216 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
CDCA4P4-201ENST00000435216 THEMISQ8N1K5 641 aaPredicted RBP20.45■□□□□ 0.86
CDCA4P4-201ENST00000435216 ERBINQ96RT1 1412 aa20.44■□□□□ 0.86
CDCA4P4-201ENST00000435216 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
CDCA4P4-201ENST00000435216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDCA4P4-201ENST00000435216 PRDM15P57071 1507 aaPredicted RBP20.43■□□□□ 0.86
CDCA4P4-201ENST00000435216 UBAP1LF5GYI3 381 aa20.41■□□□□ 0.86
CDCA4P4-201ENST00000435216 DEPDC5O75140 1603 aa20.39■□□□□ 0.86
CDCA4P4-201ENST00000435216 NPHP4O75161 1426 aaPredicted RBP20.38■□□□□ 0.85
CDCA4P4-201ENST00000435216 ANKRD30AQ9BXX3 1397 aa20.37■□□□□ 0.85
CDCA4P4-201ENST00000435216 UBR1Q8IWV7 1749 aa20.37■□□□□ 0.85
CDCA4P4-201ENST00000435216 FAM50AQ14320 339 aaKnown RBP20.37■□□□□ 0.85
CDCA4P4-201ENST00000435216 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
CDCA4P4-201ENST00000435216 VWDEQ8N2E2 1590 aa20.36■□□□□ 0.85
CDCA4P4-201ENST00000435216 MED14O60244 1454 aa20.36■□□□□ 0.85
CDCA4P4-201ENST00000435216 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
CDCA4P4-201ENST00000435216 ARHGAP31Q2M1Z3 1444 aa20.34■□□□□ 0.85
CDCA4P4-201ENST00000435216 KANK1Q14678 1352 aa20.34■□□□□ 0.85
CDCA4P4-201ENST00000435216 CPS1P31327 1500 aa20.33■□□□□ 0.85
CDCA4P4-201ENST00000435216 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
CDCA4P4-201ENST00000435216 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
CDCA4P4-201ENST00000435216 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
CDCA4P4-201ENST00000435216 STRCP1A6NGW2 1772 aa20.29■□□□□ 0.84
CDCA4P4-201ENST00000435216 LTKP29376 864 aa20.28■□□□□ 0.84
CDCA4P4-201ENST00000435216 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
CDCA4P4-201ENST00000435216 SCAF11Q99590 1463 aaKnown RBP20.28■□□□□ 0.84
CDCA4P4-201ENST00000435216 LMTK2Q8IWU2 1503 aa20.27■□□□□ 0.84
CDCA4P4-201ENST00000435216 ARHGAP23Q9P227 1491 aa20.26■□□□□ 0.83
CDCA4P4-201ENST00000435216 TXNDC2Q86VQ3 553 aa20.26■□□□□ 0.83
CDCA4P4-201ENST00000435216 SLIT1O75093 1534 aa20.26■□□□□ 0.83
CDCA4P4-201ENST00000435216 SYNMO15061 1565 aa20.25■□□□□ 0.83
CDCA4P4-201ENST00000435216 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
CDCA4P4-201ENST00000435216 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
CDCA4P4-201ENST00000435216 EFCAB6Q5THR3 1501 aa20.25■□□□□ 0.83
CDCA4P4-201ENST00000435216 STAG3Q9UJ98 1225 aa20.24■□□□□ 0.83
CDCA4P4-201ENST00000435216 ANKRD50Q9ULJ7 1429 aa20.24■□□□□ 0.83
CDCA4P4-201ENST00000435216 IDI1Q13907 227 aa20.23■□□□□ 0.83
CDCA4P4-201ENST00000435216 TOM1O60784 492 aa20.22■□□□□ 0.83
CDCA4P4-201ENST00000435216 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
CDCA4P4-201ENST00000435216 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
CDCA4P4-201ENST00000435216 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
CDCA4P4-201ENST00000435216 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
CDCA4P4-201ENST00000435216 HSPA1LP34931 641 aa20.2■□□□□ 0.82
CDCA4P4-201ENST00000435216 NOS1P29475 1434 aa20.19■□□□□ 0.82
CDCA4P4-201ENST00000435216 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
CDCA4P4-201ENST00000435216 ITGAEP38570 1179 aa20.17■□□□□ 0.82
CDCA4P4-201ENST00000435216 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
CDCA4P4-201ENST00000435216 ADGRB3O60242 1522 aa20.16■□□□□ 0.82
CDCA4P4-201ENST00000435216 TET3O43151 1660 aa20.16■□□□□ 0.82
CDCA4P4-201ENST00000435216 UNC13BO14795 1591 aa20.15■□□□□ 0.82
CDCA4P4-201ENST00000435216 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
CDCA4P4-201ENST00000435216 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
CDCA4P4-201ENST00000435216 RPRD2Q5VT52 1461 aaKnown RBP20.12■□□□□ 0.81
CDCA4P4-201ENST00000435216 MYO5BQ9ULV0 1848 aa20.12■□□□□ 0.81
CDCA4P4-201ENST00000435216 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
CDCA4P4-201ENST00000435216 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
CDCA4P4-201ENST00000435216 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
CDCA4P4-201ENST00000435216 E9PCH4 1651 aa20.1■□□□□ 0.81
CDCA4P4-201ENST00000435216 BCANQ96GW7 911 aa20.08■□□□□ 0.81
CDCA4P4-201ENST00000435216 IQGAP3Q86VI3 1631 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms