RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 DHX29Q7Z478 1369 aaKnown RBP29.2■■■□□ 2.26
SMG1P3-201ENST00000435197 FAM135AQ9P2D6 1515 aa29.2■■■□□ 2.26
SMG1P3-201ENST00000435197 KDM5DQ9BY66 1539 aa29.19■■■□□ 2.26
SMG1P3-201ENST00000435197 TNRQ92752 1358 aa29.18■■■□□ 2.26
SMG1P3-201ENST00000435197 MED1Q15648 1581 aaPredicted RBP29.18■■■□□ 2.26
SMG1P3-201ENST00000435197 PZPP20742 1482 aa29.17■■■□□ 2.26
SMG1P3-201ENST00000435197 CEP162Q5TB80 1403 aa29.15■■■□□ 2.26
SMG1P3-201ENST00000435197 SHANK2Q9UPX8 1470 aa29.15■■■□□ 2.26
SMG1P3-201ENST00000435197 CCDC141Q6ZP82 1450 aa29.13■■■□□ 2.25
SMG1P3-201ENST00000435197 FBXO31Q5XUX0 539 aaPredicted RBP29.13■■■□□ 2.25
SMG1P3-201ENST00000435197 HSPA1LP34931 641 aa29.12■■■□□ 2.25
SMG1P3-201ENST00000435197 SCAF1Q9H7N4 1312 aaKnown RBP29.12■■■□□ 2.25
SMG1P3-201ENST00000435197 KIF3BO15066 747 aa29.11■■■□□ 2.25
SMG1P3-201ENST00000435197 VWDEQ8N2E2 1590 aa29.1■■■□□ 2.25
SMG1P3-201ENST00000435197 TOM1O60784 492 aa29.09■■■□□ 2.25
SMG1P3-201ENST00000435197 PIP4K2BP78356 416 aa29.09■■■□□ 2.25
SMG1P3-201ENST00000435197 CAMSAP2Q08AD1 1489 aa29.09■■■□□ 2.25
SMG1P3-201ENST00000435197 DEPDC5O75140 1603 aa29.07■■■□□ 2.24
SMG1P3-201ENST00000435197 NLRP1Q9C000 1473 aa29.06■■■□□ 2.24
SMG1P3-201ENST00000435197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.06■■■□□ 2.241e-6■■□□□ 12.6
SMG1P3-201ENST00000435197 UGGT1Q9NYU2 1555 aa29.05■■■□□ 2.24
SMG1P3-201ENST00000435197 ANKLE2Q86XL3 938 aa29.04■■■□□ 2.24
SMG1P3-201ENST00000435197 MED14O60244 1454 aa29.04■■■□□ 2.24
SMG1P3-201ENST00000435197 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
SMG1P3-201ENST00000435197 WASHC2CQ9Y4E1 1318 aa29.03■■■□□ 2.24
SMG1P3-201ENST00000435197 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
SMG1P3-201ENST00000435197 NCOA2Q15596 1464 aa29.03■■■□□ 2.24
SMG1P3-201ENST00000435197 IQGAP1P46940 1657 aa29.02■■■□□ 2.24
SMG1P3-201ENST00000435197 NPHP4O75161 1426 aaPredicted RBP29.02■■■□□ 2.24
SMG1P3-201ENST00000435197 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.23
SMG1P3-201ENST00000435197 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
SMG1P3-201ENST00000435197 RNF17Q9BXT8 1623 aaKnown RBP28.98■■■□□ 2.23
SMG1P3-201ENST00000435197 RSPH4AQ5TD94 716 aa28.98■■■□□ 2.23
SMG1P3-201ENST00000435197 ZC3H13Q5T200 1668 aaKnown RBP28.97■■■□□ 2.23
SMG1P3-201ENST00000435197 STRCP1A6NGW2 1772 aa28.97■■■□□ 2.23
SMG1P3-201ENST00000435197 SYNMO15061 1565 aa28.93■■■□□ 2.22
SMG1P3-201ENST00000435197 ABCC3O15438 1527 aa28.93■■■□□ 2.22
SMG1P3-201ENST00000435197 EIF2AK4Q9P2K8 1649 aaKnown RBP28.9■■■□□ 2.22
SMG1P3-201ENST00000435197 MAST1Q9Y2H9 1570 aa28.89■■■□□ 2.22
SMG1P3-201ENST00000435197 LRRC7Q96NW7 1537 aa28.89■■■□□ 2.21
SMG1P3-201ENST00000435197 ERVK-7P63135 1459 aa28.87■■■□□ 2.21
SMG1P3-201ENST00000435197 TSPY4P0CV99 314 aa28.87■■■□□ 2.21
SMG1P3-201ENST00000435197 TSPY10P0CW01 314 aa28.87■■■□□ 2.21
SMG1P3-201ENST00000435197 PHF23Q9BUL5 403 aaPredicted RBP28.86■■■□□ 2.21
SMG1P3-201ENST00000435197 MROH1Q8NDA8 1641 aa28.86■■■□□ 2.21
SMG1P3-201ENST00000435197 UBR1Q8IWV7 1749 aa28.86■■■□□ 2.21
SMG1P3-201ENST00000435197 CEP152O94986 1710 aa28.85■■■□□ 2.21
SMG1P3-201ENST00000435197 CFAP65Q6ZU64 1925 aaKnown RBP28.81■■■□□ 2.2
SMG1P3-201ENST00000435197 SENP3Q9H4L4 574 aaPredicted RBP28.76■■■□□ 2.19
SMG1P3-201ENST00000435197 SCAF11Q99590 1463 aaKnown RBP28.76■■■□□ 2.19
SMG1P3-201ENST00000435197 LRRC9Q6ZRR7 1453 aa28.75■■■□□ 2.19
SMG1P3-201ENST00000435197 XIRP1Q702N8 1843 aaKnown RBP28.75■■■□□ 2.19
SMG1P3-201ENST00000435197 ARHGAP23Q9P227 1491 aa28.72■■■□□ 2.19
SMG1P3-201ENST00000435197 SLIT1O75093 1534 aa28.72■■■□□ 2.19
SMG1P3-201ENST00000435197 DUOX2Q9NRD8 1548 aa28.7■■■□□ 2.19
SMG1P3-201ENST00000435197 PRDM15P57071 1507 aaPredicted RBP28.68■■■□□ 2.18
SMG1P3-201ENST00000435197 LTKP29376 864 aa28.65■■■□□ 2.18
SMG1P3-201ENST00000435197 ARHGAP31Q2M1Z3 1444 aa28.65■■■□□ 2.18
SMG1P3-201ENST00000435197 VPS8Q8N3P4 1428 aa28.65■■■□□ 2.18
SMG1P3-201ENST00000435197 MYOM3Q5VTT5 1437 aa28.64■■■□□ 2.18
SMG1P3-201ENST00000435197 PIK3C2BO00750 1634 aa28.64■■■□□ 2.18
SMG1P3-201ENST00000435197 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.17
SMG1P3-201ENST00000435197 TXNDC2Q86VQ3 553 aa28.62■■■□□ 2.17
SMG1P3-201ENST00000435197 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
SMG1P3-201ENST00000435197 RGS17Q9UGC6 210 aaPredicted RBP28.59■■■□□ 2.17
SMG1P3-201ENST00000435197 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
SMG1P3-201ENST00000435197 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.16
SMG1P3-201ENST00000435197 KIF15Q9NS87 1388 aa28.57■■■□□ 2.16
SMG1P3-201ENST00000435197 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
SMG1P3-201ENST00000435197 EID1Q9Y6B2 187 aa28.56■■■□□ 2.16
SMG1P3-201ENST00000435197 TMEM2Q9UHN6 1383 aa28.54■■■□□ 2.16
SMG1P3-201ENST00000435197 FAM135BQ49AJ0 1406 aa28.53■■■□□ 2.16
SMG1P3-201ENST00000435197 EFCAB6Q5THR3 1501 aa28.52■■■□□ 2.16
SMG1P3-201ENST00000435197 ABCC5O15440 1437 aa28.51■■■□□ 2.15
SMG1P3-201ENST00000435197 ROBO1Q9Y6N7 1651 aa28.5■■■□□ 2.15
SMG1P3-201ENST00000435197 PTPN23Q9H3S7 1636 aa28.49■■■□□ 2.15
SMG1P3-201ENST00000435197 TMEM94Q12767 1356 aa28.49■■■□□ 2.15
SMG1P3-201ENST00000435197 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
SMG1P3-201ENST00000435197 RRP7BPQ9NSQ0 103 aa28.47■■■□□ 2.15
SMG1P3-201ENST00000435197 TET3O43151 1660 aa28.46■■■□□ 2.15
SMG1P3-201ENST00000435197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.46■■■□□ 2.15
SMG1P3-201ENST00000435197 LMTK2Q8IWU2 1503 aa28.46■■■□□ 2.15
SMG1P3-201ENST00000435197 STAG3Q9UJ98 1225 aa28.45■■■□□ 2.14
SMG1P3-201ENST00000435197 KANK1Q14678 1352 aa28.45■■■□□ 2.14
SMG1P3-201ENST00000435197 NWD1Q149M9 1564 aa28.44■■■□□ 2.14
SMG1P3-201ENST00000435197 DAPK1P53355 1430 aa28.43■■■□□ 2.14
SMG1P3-201ENST00000435197 KCNA6P17658 529 aa28.42■■■□□ 2.14
SMG1P3-201ENST00000435197 ADGRB3O60242 1522 aa28.41■■■□□ 2.14
SMG1P3-201ENST00000435197 NKTRP30414 1462 aaKnown RBP28.4■■■□□ 2.14
SMG1P3-201ENST00000435197 IDI1Q13907 227 aa28.4■■■□□ 2.14
SMG1P3-201ENST00000435197 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
SMG1P3-201ENST00000435197 SLC26A8Q96RN1 970 aa28.38■■■□□ 2.13
SMG1P3-201ENST00000435197 NOS1P29475 1434 aa28.37■■■□□ 2.13
SMG1P3-201ENST00000435197 PROSER2Q86WR7 435 aaPredicted RBP28.37■■■□□ 2.13
SMG1P3-201ENST00000435197 RBM33Q96EV2 1170 aaKnown RBP28.35■■■□□ 2.13
SMG1P3-201ENST00000435197 PHLPP1O60346 1717 aa28.35■■■□□ 2.13
SMG1P3-201ENST00000435197 ANKRD30AQ9BXX3 1397 aa28.33■■■□□ 2.13
SMG1P3-201ENST00000435197 SETD1AO15047 1707 aaKnown RBP28.32■■■□□ 2.12
SMG1P3-201ENST00000435197 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
SMG1P3-201ENST00000435197 MYO5BQ9ULV0 1848 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms