RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 NCOA1Q15788 1441 aa31.32■■■□□ 2.6
APOE-203ENST00000434152 WASHC2CQ9Y4E1 1318 aa31.31■■■□□ 2.6
APOE-203ENST00000434152 FBXO31Q5XUX0 539 aaPredicted RBP31.3■■■□□ 2.6
APOE-203ENST00000434152 DNMT1P26358 1616 aaKnown RBP31.29■■■□□ 2.6
APOE-203ENST00000434152 CROCC2H7BZ55 1655 aa31.28■■■□□ 2.6
APOE-203ENST00000434152 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
APOE-203ENST00000434152 NCKAP5LQ9HCH0 1330 aa31.26■■■□□ 2.6
APOE-203ENST00000434152 CAMSAP1Q5T5Y3 1602 aa31.26■■■□□ 2.59
APOE-203ENST00000434152 ABCC5O15440 1437 aa31.24■■■□□ 2.59
APOE-203ENST00000434152 DAPK1P53355 1430 aa31.23■■■□□ 2.59
APOE-203ENST00000434152 KDM5DQ9BY66 1539 aa31.21■■■□□ 2.59
APOE-203ENST00000434152 MYO3AQ8NEV4 1616 aa31.2■■■□□ 2.59
APOE-203ENST00000434152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.19■■■□□ 2.58
APOE-203ENST00000434152 PKD2Q13563 968 aa31.19■■■□□ 2.58
APOE-203ENST00000434152 FAM135AQ9P2D6 1515 aa31.19■■■□□ 2.58
APOE-203ENST00000434152 TNRQ92752 1358 aa31.18■■■□□ 2.58
APOE-203ENST00000434152 CEP170BQ9Y4F5 1589 aaPredicted RBP31.18■■■□□ 2.58
APOE-203ENST00000434152 PZPP20742 1482 aa31.18■■■□□ 2.58
APOE-203ENST00000434152 A2ML1A8K2U0 1454 aa31.15■■■□□ 2.58
APOE-203ENST00000434152 PPARGC1BQ86YN6 1023 aaKnown RBP31.15■■■□□ 2.58
APOE-203ENST00000434152 RRP7BPQ9NSQ0 103 aa31.15■■■□□ 2.58
APOE-203ENST00000434152 PLA2R1Q13018 1463 aa31.14■■■□□ 2.58
APOE-203ENST00000434152 ZNF142P52746 1687 aaPredicted RBP31.14■■■□□ 2.58
APOE-203ENST00000434152 FAM50AQ14320 339 aaKnown RBP31.12■■■□□ 2.57
APOE-203ENST00000434152 KIF15Q9NS87 1388 aa31.1■■■□□ 2.57
APOE-203ENST00000434152 DUOX2Q9NRD8 1548 aa31.09■■■□□ 2.57
APOE-203ENST00000434152 RRBP1Q9P2E9 1410 aaKnown RBP31.09■■■□□ 2.57
APOE-203ENST00000434152 RNF17Q9BXT8 1623 aaKnown RBP31.09■■■□□ 2.57
APOE-203ENST00000434152 EIF2AK4Q9P2K8 1649 aaKnown RBP31.09■■■□□ 2.57
APOE-203ENST00000434152 LTBP4Q8N2S1 1624 aa31.08■■■□□ 2.57
APOE-203ENST00000434152 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
APOE-203ENST00000434152 CHIC2Q9UKJ5 165 aa31.07■■■□□ 2.56
APOE-203ENST00000434152 ABCC3O15438 1527 aa31.07■■■□□ 2.56
APOE-203ENST00000434152 ANKRD30AQ9BXX3 1397 aa31.05■■■□□ 2.56
APOE-203ENST00000434152 ZNF335Q9H4Z2 1342 aaPredicted RBP31.04■■■□□ 2.56
APOE-203ENST00000434152 THEMISQ8N1K5 641 aaPredicted RBP31.03■■■□□ 2.56
APOE-203ENST00000434152 MROH1Q8NDA8 1641 aa31.02■■■□□ 2.56
APOE-203ENST00000434152 ERBINQ96RT1 1412 aa31■■■□□ 2.55
APOE-203ENST00000434152 NLRP1Q9C000 1473 aa31■■■□□ 2.55
APOE-203ENST00000434152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.99■■■□□ 2.554e-44■□□□□ 8.7
APOE-203ENST00000434152 ANKLE2Q86XL3 938 aa30.98■■■□□ 2.55
APOE-203ENST00000434152 ROCK1Q13464 1354 aa30.95■■■□□ 2.55
APOE-203ENST00000434152 ZC3H13Q5T200 1668 aaKnown RBP30.95■■■□□ 2.55
APOE-203ENST00000434152 ERVK-7P63135 1459 aa30.95■■■□□ 2.54
APOE-203ENST00000434152 SPATA31D1Q6ZQQ2 1576 aa30.94■■■□□ 2.54
APOE-203ENST00000434152 UGGT1Q9NYU2 1555 aa30.93■■■□□ 2.54
APOE-203ENST00000434152 IQSEC2Q5JU85 1478 aa30.9■■■□□ 2.54
APOE-203ENST00000434152 ARHGAP31Q2M1Z3 1444 aa30.89■■■□□ 2.53
APOE-203ENST00000434152 PRDM15P57071 1507 aaPredicted RBP30.88■■■□□ 2.53
APOE-203ENST00000434152 CEP152O94986 1710 aa30.88■■■□□ 2.53
APOE-203ENST00000434152 DEPDC5O75140 1603 aa30.87■■■□□ 2.53
APOE-203ENST00000434152 KANK1Q14678 1352 aa30.87■■■□□ 2.53
APOE-203ENST00000434152 NEURL4Q96JN8 1562 aa30.87■■■□□ 2.53
APOE-203ENST00000434152 ANKRD50Q9ULJ7 1429 aa30.83■■■□□ 2.53
APOE-203ENST00000434152 CFAP65Q6ZU64 1925 aaKnown RBP30.82■■■□□ 2.52
APOE-203ENST00000434152 NPHP4O75161 1426 aaPredicted RBP30.81■■■□□ 2.52
APOE-203ENST00000434152 MED14O60244 1454 aa30.81■■■□□ 2.52
APOE-203ENST00000434152 POLR1AO95602 1720 aaPredicted RBP30.8■■■□□ 2.52
APOE-203ENST00000434152 UBAP1LF5GYI3 381 aa30.79■■■□□ 2.52
APOE-203ENST00000434152 ITGAEP38570 1179 aa30.77■■■□□ 2.52
APOE-203ENST00000434152 LMTK2Q8IWU2 1503 aa30.75■■■□□ 2.51
APOE-203ENST00000434152 VWDEQ8N2E2 1590 aa30.75■■■□□ 2.51
APOE-203ENST00000434152 LTKP29376 864 aa30.73■■■□□ 2.51
APOE-203ENST00000434152 IDI1Q13907 227 aa30.73■■■□□ 2.51
APOE-203ENST00000434152 TXNDC2Q86VQ3 553 aa30.73■■■□□ 2.51
APOE-203ENST00000434152 UNC13BO14795 1591 aa30.7■■■□□ 2.5
APOE-203ENST00000434152 UBR1Q8IWV7 1749 aa30.7■■■□□ 2.5
APOE-203ENST00000434152 STAG3Q9UJ98 1225 aa30.69■■■□□ 2.5
APOE-203ENST00000434152 CPS1P31327 1500 aa30.68■■■□□ 2.5
APOE-203ENST00000434152 GCC2Q8IWJ2 1684 aa30.68■■■□□ 2.5
APOE-203ENST00000434152 ARHGAP23Q9P227 1491 aa30.67■■■□□ 2.5
APOE-203ENST00000434152 EID1Q9Y6B2 187 aa30.66■■■□□ 2.5
APOE-203ENST00000434152 SCAF11Q99590 1463 aaKnown RBP30.65■■■□□ 2.5
APOE-203ENST00000434152 IQGAP1P46940 1657 aa30.65■■■□□ 2.5
APOE-203ENST00000434152 NOS1P29475 1434 aa30.64■■■□□ 2.5
APOE-203ENST00000434152 SLIT1O75093 1534 aa30.64■■■□□ 2.5
APOE-203ENST00000434152 NAIPQ13075 1403 aa30.64■■■□□ 2.49
APOE-203ENST00000434152 TMEM2Q9UHN6 1383 aa30.63■■■□□ 2.49
APOE-203ENST00000434152 HFM1A2PYH4 1435 aa30.63■■■□□ 2.49
APOE-203ENST00000434152 SLC52A1Q9NWF4 448 aa30.61■■■□□ 2.49
APOE-203ENST00000434152 EFCAB6Q5THR3 1501 aa30.61■■■□□ 2.49
APOE-203ENST00000434152 PIK3C2BO00750 1634 aa30.61■■■□□ 2.49
APOE-203ENST00000434152 TOM1O60784 492 aa30.6■■■□□ 2.49
APOE-203ENST00000434152 SYNMO15061 1565 aa30.58■■■□□ 2.49
APOE-203ENST00000434152 PIP4K2BP78356 416 aa30.57■■■□□ 2.48
APOE-203ENST00000434152 IQGAP3Q86VI3 1631 aa30.57■■■□□ 2.48
APOE-203ENST00000434152 TET3O43151 1660 aa30.56■■■□□ 2.48
APOE-203ENST00000434152 SCAF1Q9H7N4 1312 aaKnown RBP30.54■■■□□ 2.48
APOE-203ENST00000434152 RPRD2Q5VT52 1461 aaKnown RBP30.54■■■□□ 2.48
APOE-203ENST00000434152 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
APOE-203ENST00000434152 LRRC7Q96NW7 1537 aa30.51■■■□□ 2.47
APOE-203ENST00000434152 STRCP1A6NGW2 1772 aa30.49■■■□□ 2.47
APOE-203ENST00000434152 NUP155O75694 1391 aa30.48■■■□□ 2.47
APOE-203ENST00000434152 KDM5AP29375 1690 aaKnown RBP30.48■■■□□ 2.47
APOE-203ENST00000434152 HSPA1LP34931 641 aa30.47■■■□□ 2.47
APOE-203ENST00000434152 SLC26A8Q96RN1 970 aa30.46■■■□□ 2.47
APOE-203ENST00000434152 ADGRB3O60242 1522 aa30.44■■■□□ 2.46
APOE-203ENST00000434152 ACIN1Q9UKV3 1341 aaKnown RBP30.44■■■□□ 2.46
APOE-203ENST00000434152 E9PCH4 1651 aa30.42■■■□□ 2.46
APOE-203ENST00000434152 KCNA6P17658 529 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms