RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 CEP170BQ9Y4F5 1589 aaPredicted RBP27.61■■■□□ 2.01
RCC1-209ENST00000430407 IQSEC2Q5JU85 1478 aa27.61■■■□□ 2.01
RCC1-209ENST00000430407 WASHC2CQ9Y4E1 1318 aa27.6■■■□□ 2.01
RCC1-209ENST00000430407 ZNF142P52746 1687 aaPredicted RBP27.58■■■□□ 2.01
RCC1-209ENST00000430407 ZNF335Q9H4Z2 1342 aaPredicted RBP27.57■■■□□ 2
RCC1-209ENST00000430407 DISP3Q9P2K9 1392 aa27.56■■■□□ 2
RCC1-209ENST00000430407 MYOM3Q5VTT5 1437 aa27.55■■■□□ 2
RCC1-209ENST00000430407 MIA2Q96PC5 1412 aa27.55■■■□□ 2
RCC1-209ENST00000430407 A2ML1A8K2U0 1454 aa27.55■■■□□ 2
RCC1-209ENST00000430407 TCOF1Q13428 1488 aaKnown RBP27.54■■■□□ 2
RCC1-209ENST00000430407 TNRQ92752 1358 aa27.54■■■□□ 2
RCC1-209ENST00000430407 FBXO31Q5XUX0 539 aaPredicted RBP27.53■■■□□ 2
RCC1-209ENST00000430407 KDM5DQ9BY66 1539 aa27.52■■■□□ 2
RCC1-209ENST00000430407 FAM135AQ9P2D6 1515 aa27.51■■■□□ 2
RCC1-209ENST00000430407 ARHGEF5Q12774 1597 aa27.49■■□□□ 1.99
RCC1-209ENST00000430407 PZPP20742 1482 aa27.49■■□□□ 1.99
RCC1-209ENST00000430407 UBAP1LF5GYI3 381 aa27.48■■□□□ 1.99
RCC1-209ENST00000430407 DNMT1P26358 1616 aaKnown RBP27.46■■□□□ 1.99
RCC1-209ENST00000430407 THEMISQ8N1K5 641 aaPredicted RBP27.45■■□□□ 1.98
RCC1-209ENST00000430407 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
RCC1-209ENST00000430407 NLRP1Q9C000 1473 aa27.39■■□□□ 1.98
RCC1-209ENST00000430407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.38■■□□□ 1.97
RCC1-209ENST00000430407 FGD6Q6ZV73 1430 aa27.36■■□□□ 1.97
RCC1-209ENST00000430407 UGGT1Q9NYU2 1555 aa27.35■■□□□ 1.97
RCC1-209ENST00000430407 MAST1Q9Y2H9 1570 aa27.35■■□□□ 1.97
RCC1-209ENST00000430407 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
RCC1-209ENST00000430407 ILDR2Q71H61 639 aa27.33■■□□□ 1.97
RCC1-209ENST00000430407 SCAF1Q9H7N4 1312 aaKnown RBP27.32■■□□□ 1.96
RCC1-209ENST00000430407 SPATA31D1Q6ZQQ2 1576 aa27.31■■□□□ 1.96
RCC1-209ENST00000430407 TOM1O60784 492 aa27.3■■□□□ 1.96
RCC1-209ENST00000430407 CPS1P31327 1500 aa27.3■■□□□ 1.96
RCC1-209ENST00000430407 RNF17Q9BXT8 1623 aaKnown RBP27.3■■□□□ 1.96
RCC1-209ENST00000430407 POLR1AO95602 1720 aaPredicted RBP27.3■■□□□ 1.96
RCC1-209ENST00000430407 SHANK2Q9UPX8 1470 aa27.29■■□□□ 1.96
RCC1-209ENST00000430407 ABCC3O15438 1527 aa27.29■■□□□ 1.96
RCC1-209ENST00000430407 NEURL4Q96JN8 1562 aa27.28■■□□□ 1.96
RCC1-209ENST00000430407 NPHP4O75161 1426 aaPredicted RBP27.28■■□□□ 1.96
RCC1-209ENST00000430407 ZC3H13Q5T200 1668 aaKnown RBP27.27■■□□□ 1.96
RCC1-209ENST00000430407 EIF2AK4Q9P2K8 1649 aaKnown RBP27.27■■□□□ 1.96
RCC1-209ENST00000430407 ABCC5O15440 1437 aa27.27■■□□□ 1.96
RCC1-209ENST00000430407 PIP4K2BP78356 416 aa27.26■■□□□ 1.95
RCC1-209ENST00000430407 DUOX2Q9NRD8 1548 aa27.26■■□□□ 1.95
RCC1-209ENST00000430407 SOCS7O14512 581 aa27.25■■□□□ 1.95
RCC1-209ENST00000430407 DAPK1P53355 1430 aa27.24■■□□□ 1.95
RCC1-209ENST00000430407 RRP7BPQ9NSQ0 103 aa27.23■■□□□ 1.95
RCC1-209ENST00000430407 MED14O60244 1454 aa27.23■■□□□ 1.95
RCC1-209ENST00000430407 ERVK-7P63135 1459 aa27.23■■□□□ 1.95
RCC1-209ENST00000430407 KIF15Q9NS87 1388 aa27.22■■□□□ 1.95
RCC1-209ENST00000430407 DEPDC5O75140 1603 aa27.2■■□□□ 1.95
RCC1-209ENST00000430407 FAM50AQ14320 339 aaKnown RBP27.19■■□□□ 1.94
RCC1-209ENST00000430407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.19■■□□□ 1.94
RCC1-209ENST00000430407 ERBINQ96RT1 1412 aa27.18■■□□□ 1.94
RCC1-209ENST00000430407 CROCC2H7BZ55 1655 aa27.17■■□□□ 1.94
RCC1-209ENST00000430407 KANK1Q14678 1352 aa27.16■■□□□ 1.94
RCC1-209ENST00000430407 MROH1Q8NDA8 1641 aa27.16■■□□□ 1.94
RCC1-209ENST00000430407 VWDEQ8N2E2 1590 aa27.15■■□□□ 1.94
RCC1-209ENST00000430407 HSPA1LP34931 641 aa27.15■■□□□ 1.94
RCC1-209ENST00000430407 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
RCC1-209ENST00000430407 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
RCC1-209ENST00000430407 IQGAP1P46940 1657 aa27.13■■□□□ 1.93
RCC1-209ENST00000430407 STAG3Q9UJ98 1225 aa27.12■■□□□ 1.93
RCC1-209ENST00000430407 EID1Q9Y6B2 187 aa27.12■■□□□ 1.93
RCC1-209ENST00000430407 ARHGAP31Q2M1Z3 1444 aa27.12■■□□□ 1.93
RCC1-209ENST00000430407 CEP152O94986 1710 aa27.12■■□□□ 1.93
RCC1-209ENST00000430407 TXNDC2Q86VQ3 553 aa27.11■■□□□ 1.93
RCC1-209ENST00000430407 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
RCC1-209ENST00000430407 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
RCC1-209ENST00000430407 SCAF11Q99590 1463 aaKnown RBP27.08■■□□□ 1.93
RCC1-209ENST00000430407 ADGRL2O95490 1459 aa27.05■■□□□ 1.92
RCC1-209ENST00000430407 LTKP29376 864 aa27.04■■□□□ 1.92
RCC1-209ENST00000430407 UBR1Q8IWV7 1749 aa27.04■■□□□ 1.92
RCC1-209ENST00000430407 CFAP65Q6ZU64 1925 aaKnown RBP27.02■■□□□ 1.92
RCC1-209ENST00000430407 LRRC7Q96NW7 1537 aa27.02■■□□□ 1.92
RCC1-209ENST00000430407 SLIT1O75093 1534 aa27■■□□□ 1.91
RCC1-209ENST00000430407 ARHGAP23Q9P227 1491 aa27■■□□□ 1.91
RCC1-209ENST00000430407 SYNMO15061 1565 aa26.98■■□□□ 1.91
RCC1-209ENST00000430407 TMEM2Q9UHN6 1383 aa26.97■■□□□ 1.91
RCC1-209ENST00000430407 SENP3Q9H4L4 574 aaPredicted RBP26.97■■□□□ 1.91
RCC1-209ENST00000430407 IDI1Q13907 227 aa26.96■■□□□ 1.91
RCC1-209ENST00000430407 PHF23Q9BUL5 403 aaPredicted RBP26.95■■□□□ 1.9
RCC1-209ENST00000430407 LMTK2Q8IWU2 1503 aa26.95■■□□□ 1.9
RCC1-209ENST00000430407 PIK3C2BO00750 1634 aa26.93■■□□□ 1.9
RCC1-209ENST00000430407 MED1Q15648 1581 aaPredicted RBP26.92■■□□□ 1.9
RCC1-209ENST00000430407 ANKRD50Q9ULJ7 1429 aa26.92■■□□□ 1.9
RCC1-209ENST00000430407 ROCK1Q13464 1354 aa26.92■■□□□ 1.9
RCC1-209ENST00000430407 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
RCC1-209ENST00000430407 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
RCC1-209ENST00000430407 ALKQ9UM73 1620 aa26.9■■□□□ 1.9
RCC1-209ENST00000430407 SLC52A1Q9NWF4 448 aa26.9■■□□□ 1.9
RCC1-209ENST00000430407 BCANQ96GW7 911 aa26.89■■□□□ 1.9
RCC1-209ENST00000430407 ITGAEP38570 1179 aa26.88■■□□□ 1.89
RCC1-209ENST00000430407 RRBP1Q9P2E9 1410 aaKnown RBP26.87■■□□□ 1.89
RCC1-209ENST00000430407 NOS1P29475 1434 aa26.85■■□□□ 1.89
RCC1-209ENST00000430407 KCNA6P17658 529 aa26.85■■□□□ 1.89
RCC1-209ENST00000430407 SLC26A8Q96RN1 970 aa26.85■■□□□ 1.89
RCC1-209ENST00000430407 KDM5AP29375 1690 aaKnown RBP26.84■■□□□ 1.89
RCC1-209ENST00000430407 HDGFP51858 240 aaKnown RBP26.82■■□□□ 1.88
RCC1-209ENST00000430407 PROSER2Q86WR7 435 aaPredicted RBP26.82■■□□□ 1.88
RCC1-209ENST00000430407 RPRD2Q5VT52 1461 aaKnown RBP26.81■■□□□ 1.88
RCC1-209ENST00000430407 TMEM94Q12767 1356 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms