RNA–Protein interactions for RNA: ENST00000429947.1

LINC01237-202, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4

Gene LINC01237, Length 470 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-202ENST00000429947 PKD2Q13563 968 aa21.5■■□□□ 1.03
LINC01237-202ENST00000429947 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
LINC01237-202ENST00000429947 ABCC5O15440 1437 aa21.49■■□□□ 1.03
LINC01237-202ENST00000429947 IQSEC2Q5JU85 1478 aa21.49■■□□□ 1.03
LINC01237-202ENST00000429947 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
LINC01237-202ENST00000429947 DAPK1P53355 1430 aa21.48■■□□□ 1.03
LINC01237-202ENST00000429947 A2MP01023 1474 aa21.48■■□□□ 1.03
LINC01237-202ENST00000429947 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
LINC01237-202ENST00000429947 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
LINC01237-202ENST00000429947 CROCC2H7BZ55 1655 aa21.47■■□□□ 1.03
LINC01237-202ENST00000429947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
LINC01237-202ENST00000429947 MROH2AA6NES4 1674 aa21.45■■□□□ 1.02
LINC01237-202ENST00000429947 ZNF335Q9H4Z2 1342 aaPredicted RBP21.44■■□□□ 1.02
LINC01237-202ENST00000429947 PTPRKQ15262 1439 aa21.44■■□□□ 1.02
LINC01237-202ENST00000429947 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
LINC01237-202ENST00000429947 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
LINC01237-202ENST00000429947 UBAP1LF5GYI3 381 aa21.42■■□□□ 1.02
LINC01237-202ENST00000429947 DHX29Q7Z478 1369 aaKnown RBP21.42■■□□□ 1.02
LINC01237-202ENST00000429947 PLA2R1Q13018 1463 aa21.39■■□□□ 1.02
LINC01237-202ENST00000429947 CLTCQ00610 1675 aaKnown RBP21.37■■□□□ 1.01
LINC01237-202ENST00000429947 ANKRD30AQ9BXX3 1397 aa21.37■■□□□ 1.01
LINC01237-202ENST00000429947 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
LINC01237-202ENST00000429947 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
LINC01237-202ENST00000429947 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
LINC01237-202ENST00000429947 KIF3BO15066 747 aa21.35■■□□□ 1.01
LINC01237-202ENST00000429947 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
LINC01237-202ENST00000429947 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1.01
LINC01237-202ENST00000429947 FBXO31Q5XUX0 539 aaPredicted RBP21.33■■□□□ 1.01
LINC01237-202ENST00000429947 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1.01
LINC01237-202ENST00000429947 A2ML1A8K2U0 1454 aa21.31■■□□□ 1
LINC01237-202ENST00000429947 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
LINC01237-202ENST00000429947 MYO3AQ8NEV4 1616 aa21.3■■□□□ 1
LINC01237-202ENST00000429947 EIF2AK4Q9P2K8 1649 aaKnown RBP21.3■■□□□ 1
LINC01237-202ENST00000429947 SPATA31D1Q6ZQQ2 1576 aa21.3■■□□□ 1
LINC01237-202ENST00000429947 ZNF142P52746 1687 aaPredicted RBP21.29■■□□□ 1
LINC01237-202ENST00000429947 ROCK1Q13464 1354 aa21.29■■□□□ 1
LINC01237-202ENST00000429947 ITGAEP38570 1179 aa21.29■■□□□ 1
LINC01237-202ENST00000429947 ERBINQ96RT1 1412 aa21.29■■□□□ 1
LINC01237-202ENST00000429947 TNRQ92752 1358 aa21.27■■□□□ 1
LINC01237-202ENST00000429947 ANKLE2Q86XL3 938 aa21.27■■□□□ 1
LINC01237-202ENST00000429947 THEMISQ8N1K5 641 aaPredicted RBP21.27■■□□□ 1
LINC01237-202ENST00000429947 TOM1O60784 492 aa21.26■□□□□ 0.99
LINC01237-202ENST00000429947 RNF17Q9BXT8 1623 aaKnown RBP21.25■□□□□ 0.99
LINC01237-202ENST00000429947 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
LINC01237-202ENST00000429947 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
LINC01237-202ENST00000429947 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
LINC01237-202ENST00000429947 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
LINC01237-202ENST00000429947 PZPP20742 1482 aa21.2■□□□□ 0.98
LINC01237-202ENST00000429947 HSPA1LP34931 641 aa21.2■□□□□ 0.98
LINC01237-202ENST00000429947 KDM5DQ9BY66 1539 aa21.18■□□□□ 0.98
LINC01237-202ENST00000429947 MROH1Q8NDA8 1641 aa21.18■□□□□ 0.98
LINC01237-202ENST00000429947 DEPDC5O75140 1603 aa21.17■□□□□ 0.98
LINC01237-202ENST00000429947 CPS1P31327 1500 aa21.16■□□□□ 0.98
LINC01237-202ENST00000429947 PRDM15P57071 1507 aaPredicted RBP21.15■□□□□ 0.98
LINC01237-202ENST00000429947 ZC3H13Q5T200 1668 aaKnown RBP21.15■□□□□ 0.98
LINC01237-202ENST00000429947 NLRP1Q9C000 1473 aa21.14■□□□□ 0.98
LINC01237-202ENST00000429947 KANK1Q14678 1352 aa21.13■□□□□ 0.97
LINC01237-202ENST00000429947 ABCC3O15438 1527 aa21.12■□□□□ 0.97
LINC01237-202ENST00000429947 NEURL4Q96JN8 1562 aa21.11■□□□□ 0.97
LINC01237-202ENST00000429947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC01237-202ENST00000429947 GCC2Q8IWJ2 1684 aa21.11■□□□□ 0.97
LINC01237-202ENST00000429947 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
LINC01237-202ENST00000429947 NPHP4O75161 1426 aaPredicted RBP21.11■□□□□ 0.97
LINC01237-202ENST00000429947 NAIPQ13075 1403 aa21.11■□□□□ 0.97
LINC01237-202ENST00000429947 MED14O60244 1454 aa21.1■□□□□ 0.97
LINC01237-202ENST00000429947 UGGT1Q9NYU2 1555 aa21.1■□□□□ 0.97
LINC01237-202ENST00000429947 CEP152O94986 1710 aa21.09■□□□□ 0.97
LINC01237-202ENST00000429947 VWDEQ8N2E2 1590 aa21.09■□□□□ 0.97
LINC01237-202ENST00000429947 UNC13BO14795 1591 aa21.07■□□□□ 0.96
LINC01237-202ENST00000429947 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
LINC01237-202ENST00000429947 LMTK2Q8IWU2 1503 aa21.06■□□□□ 0.96
LINC01237-202ENST00000429947 ARHGAP31Q2M1Z3 1444 aa21.04■□□□□ 0.96
LINC01237-202ENST00000429947 NUP155O75694 1391 aa21■□□□□ 0.95
LINC01237-202ENST00000429947 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
LINC01237-202ENST00000429947 CFAP65Q6ZU64 1925 aaKnown RBP21■□□□□ 0.95
LINC01237-202ENST00000429947 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
LINC01237-202ENST00000429947 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
LINC01237-202ENST00000429947 TET3O43151 1660 aa20.99■□□□□ 0.95
LINC01237-202ENST00000429947 ERVK-7P63135 1459 aa20.98■□□□□ 0.95
LINC01237-202ENST00000429947 EFCAB6Q5THR3 1501 aa20.98■□□□□ 0.95
LINC01237-202ENST00000429947 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
LINC01237-202ENST00000429947 LTKP29376 864 aa20.97■□□□□ 0.95
LINC01237-202ENST00000429947 LRRC7Q96NW7 1537 aa20.97■□□□□ 0.95
LINC01237-202ENST00000429947 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.95
LINC01237-202ENST00000429947 EID1Q9Y6B2 187 aa20.95■□□□□ 0.94
LINC01237-202ENST00000429947 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
LINC01237-202ENST00000429947 IQGAP1P46940 1657 aa20.95■□□□□ 0.94
LINC01237-202ENST00000429947 RPRD2Q5VT52 1461 aaKnown RBP20.94■□□□□ 0.94
LINC01237-202ENST00000429947 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
LINC01237-202ENST00000429947 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
LINC01237-202ENST00000429947 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
LINC01237-202ENST00000429947 SCAF11Q99590 1463 aaKnown RBP20.91■□□□□ 0.94
LINC01237-202ENST00000429947 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.93
LINC01237-202ENST00000429947 E9PCH4 1651 aa20.89■□□□□ 0.93
LINC01237-202ENST00000429947 NOS1P29475 1434 aa20.88■□□□□ 0.93
LINC01237-202ENST00000429947 ARHGAP23Q9P227 1491 aa20.88■□□□□ 0.93
LINC01237-202ENST00000429947 STRCP1A6NGW2 1772 aa20.87■□□□□ 0.93
LINC01237-202ENST00000429947 RAB3GAP2Q9H2M9 1393 aa20.86■□□□□ 0.93
LINC01237-202ENST00000429947 SLIT1O75093 1534 aa20.86■□□□□ 0.93
LINC01237-202ENST00000429947 UBR1Q8IWV7 1749 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms