RNA–Protein interactions for RNA: ENST00000429947.1

LINC01237-202, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4

Gene LINC01237, Length 470 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-202ENST00000429947 NISCHQ9Y2I1 1504 aa33.7■■■□□ 2.99
LINC01237-202ENST00000429947 ABCC9O60706 1549 aa30.39■■■□□ 2.46
LINC01237-202ENST00000429947 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
LINC01237-202ENST00000429947 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
LINC01237-202ENST00000429947 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
LINC01237-202ENST00000429947 NACADO15069 1562 aa28.55■■■□□ 2.16
LINC01237-202ENST00000429947 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
LINC01237-202ENST00000429947 PABPN1Q86U42 306 aaKnown RBP eCLIP28.37■■■□□ 2.13
LINC01237-202ENST00000429947 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
LINC01237-202ENST00000429947 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
LINC01237-202ENST00000429947 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
LINC01237-202ENST00000429947 BICRAQ9NZM4 1560 aa27.93■■■□□ 2.06
LINC01237-202ENST00000429947 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
LINC01237-202ENST00000429947 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
LINC01237-202ENST00000429947 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
LINC01237-202ENST00000429947 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
LINC01237-202ENST00000429947 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
LINC01237-202ENST00000429947 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
LINC01237-202ENST00000429947 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
LINC01237-202ENST00000429947 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
LINC01237-202ENST00000429947 CUX2O14529 1486 aa26.3■■□□□ 1.8
LINC01237-202ENST00000429947 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
LINC01237-202ENST00000429947 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
LINC01237-202ENST00000429947 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
LINC01237-202ENST00000429947 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
LINC01237-202ENST00000429947 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
LINC01237-202ENST00000429947 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
LINC01237-202ENST00000429947 NESP48681 1621 aa26.03■■□□□ 1.76
LINC01237-202ENST00000429947 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
LINC01237-202ENST00000429947 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
LINC01237-202ENST00000429947 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
LINC01237-202ENST00000429947 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
LINC01237-202ENST00000429947 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
LINC01237-202ENST00000429947 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
LINC01237-202ENST00000429947 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
LINC01237-202ENST00000429947 WIZO95785 1651 aa25.68■■□□□ 1.7
LINC01237-202ENST00000429947 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.69
LINC01237-202ENST00000429947 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
LINC01237-202ENST00000429947 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
LINC01237-202ENST00000429947 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
LINC01237-202ENST00000429947 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
LINC01237-202ENST00000429947 WDR62O43379 1518 aa25.36■■□□□ 1.65
LINC01237-202ENST00000429947 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
LINC01237-202ENST00000429947 FANCD2Q9BXW9 1451 aa25.28■■□□□ 1.64
LINC01237-202ENST00000429947 CFTRP13569 1480 aa25.24■■□□□ 1.63
LINC01237-202ENST00000429947 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
LINC01237-202ENST00000429947 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
LINC01237-202ENST00000429947 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
LINC01237-202ENST00000429947 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
LINC01237-202ENST00000429947 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
LINC01237-202ENST00000429947 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
LINC01237-202ENST00000429947 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
LINC01237-202ENST00000429947 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
LINC01237-202ENST00000429947 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
LINC01237-202ENST00000429947 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
LINC01237-202ENST00000429947 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
LINC01237-202ENST00000429947 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
LINC01237-202ENST00000429947 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
LINC01237-202ENST00000429947 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
LINC01237-202ENST00000429947 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.53
LINC01237-202ENST00000429947 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
LINC01237-202ENST00000429947 FBLN2P98095 1184 aa24.57■■□□□ 1.52
LINC01237-202ENST00000429947 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
LINC01237-202ENST00000429947 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
LINC01237-202ENST00000429947 POLA1P09884 1462 aaPredicted RBP24.48■■□□□ 1.51
LINC01237-202ENST00000429947 SOGA1O94964 1423 aa24.46■■□□□ 1.51
LINC01237-202ENST00000429947 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
LINC01237-202ENST00000429947 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
LINC01237-202ENST00000429947 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
LINC01237-202ENST00000429947 CHD1O14646 1710 aa24.39■■□□□ 1.5
LINC01237-202ENST00000429947 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
LINC01237-202ENST00000429947 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
LINC01237-202ENST00000429947 CUX1P39880 1505 aa24.34■■□□□ 1.49
LINC01237-202ENST00000429947 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
LINC01237-202ENST00000429947 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
LINC01237-202ENST00000429947 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
LINC01237-202ENST00000429947 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
LINC01237-202ENST00000429947 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
LINC01237-202ENST00000429947 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
LINC01237-202ENST00000429947 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
LINC01237-202ENST00000429947 BIVM-ERCC5R4GMW8 1640 aa24.2■■□□□ 1.46
LINC01237-202ENST00000429947 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
LINC01237-202ENST00000429947 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
LINC01237-202ENST00000429947 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
LINC01237-202ENST00000429947 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
LINC01237-202ENST00000429947 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
LINC01237-202ENST00000429947 PBRM1Q86U86 1689 aa23.93■■□□□ 1.42
LINC01237-202ENST00000429947 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
LINC01237-202ENST00000429947 ABCA5Q8WWZ7 1642 aa23.91■■□□□ 1.42
LINC01237-202ENST00000429947 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
LINC01237-202ENST00000429947 NUP160Q12769 1436 aa23.82■■□□□ 1.4
LINC01237-202ENST00000429947 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
LINC01237-202ENST00000429947 ERCC6L2Q5T890 1561 aa23.79■■□□□ 1.4
LINC01237-202ENST00000429947 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
LINC01237-202ENST00000429947 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
LINC01237-202ENST00000429947 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
LINC01237-202ENST00000429947 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
LINC01237-202ENST00000429947 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
LINC01237-202ENST00000429947 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
LINC01237-202ENST00000429947 PRG4Q92954 1404 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms