RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
TTC3-208ENST00000428693 FBXO31Q5XUX0 539 aaPredicted RBP18.81■□□□□ 0.6
TTC3-208ENST00000428693 CEP170BQ9Y4F5 1589 aaPredicted RBP18.78■□□□□ 0.6
TTC3-208ENST00000428693 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
TTC3-208ENST00000428693 MIA2Q96PC5 1412 aa18.77■□□□□ 0.6
TTC3-208ENST00000428693 TNRQ92752 1358 aa18.77■□□□□ 0.6
TTC3-208ENST00000428693 PKD2Q13563 968 aa18.75■□□□□ 0.59
TTC3-208ENST00000428693 ZNF142P52746 1687 aaPredicted RBP18.74■□□□□ 0.59
TTC3-208ENST00000428693 A2ML1A8K2U0 1454 aa18.73■□□□□ 0.59
TTC3-208ENST00000428693 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
TTC3-208ENST00000428693 PZPP20742 1482 aa18.72■□□□□ 0.59
TTC3-208ENST00000428693 MAST1Q9Y2H9 1570 aa18.72■□□□□ 0.59
TTC3-208ENST00000428693 ZNF335Q9H4Z2 1342 aaPredicted RBP18.72■□□□□ 0.59
TTC3-208ENST00000428693 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
TTC3-208ENST00000428693 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
TTC3-208ENST00000428693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.582e-6■■■□□ 19
TTC3-208ENST00000428693 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
TTC3-208ENST00000428693 PTPN23Q9H3S7 1636 aa18.7■□□□□ 0.58
TTC3-208ENST00000428693 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
TTC3-208ENST00000428693 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
TTC3-208ENST00000428693 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
TTC3-208ENST00000428693 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
TTC3-208ENST00000428693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
TTC3-208ENST00000428693 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
TTC3-208ENST00000428693 ABCC5O15440 1437 aa18.66■□□□□ 0.58
TTC3-208ENST00000428693 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
TTC3-208ENST00000428693 DUOX2Q9NRD8 1548 aa18.66■□□□□ 0.58
TTC3-208ENST00000428693 THEMISQ8N1K5 641 aaPredicted RBP18.66■□□□□ 0.58
TTC3-208ENST00000428693 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
TTC3-208ENST00000428693 RNF17Q9BXT8 1623 aaKnown RBP18.66■□□□□ 0.58
TTC3-208ENST00000428693 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
TTC3-208ENST00000428693 ABCC3O15438 1527 aa18.65■□□□□ 0.58
TTC3-208ENST00000428693 EIF2AK4Q9P2K8 1649 aaKnown RBP18.65■□□□□ 0.58
TTC3-208ENST00000428693 ANKLE2Q86XL3 938 aa18.65■□□□□ 0.58
TTC3-208ENST00000428693 DAPK1P53355 1430 aa18.64■□□□□ 0.57
TTC3-208ENST00000428693 CEP152O94986 1710 aa18.63■□□□□ 0.57
TTC3-208ENST00000428693 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
TTC3-208ENST00000428693 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
TTC3-208ENST00000428693 ZC3H13Q5T200 1668 aaKnown RBP18.63■□□□□ 0.57
TTC3-208ENST00000428693 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
TTC3-208ENST00000428693 NLRP1Q9C000 1473 aa18.62■□□□□ 0.57
TTC3-208ENST00000428693 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
TTC3-208ENST00000428693 ANKRD30AQ9BXX3 1397 aa18.61■□□□□ 0.57
TTC3-208ENST00000428693 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
TTC3-208ENST00000428693 ERBINQ96RT1 1412 aa18.59■□□□□ 0.57
TTC3-208ENST00000428693 KANK1Q14678 1352 aa18.59■□□□□ 0.57
TTC3-208ENST00000428693 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
TTC3-208ENST00000428693 MROH1Q8NDA8 1641 aa18.59■□□□□ 0.57
TTC3-208ENST00000428693 ERVK-7P63135 1459 aa18.58■□□□□ 0.57
TTC3-208ENST00000428693 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
TTC3-208ENST00000428693 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
TTC3-208ENST00000428693 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
TTC3-208ENST00000428693 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
TTC3-208ENST00000428693 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
TTC3-208ENST00000428693 NPHP4O75161 1426 aaPredicted RBP18.55■□□□□ 0.56
TTC3-208ENST00000428693 DISP3Q9P2K9 1392 aa18.54■□□□□ 0.56
TTC3-208ENST00000428693 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
TTC3-208ENST00000428693 PRDM15P57071 1507 aaPredicted RBP18.53■□□□□ 0.56
TTC3-208ENST00000428693 ITGAEP38570 1179 aa18.5■□□□□ 0.55
TTC3-208ENST00000428693 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
TTC3-208ENST00000428693 EID1Q9Y6B2 187 aa18.49■□□□□ 0.55
TTC3-208ENST00000428693 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
TTC3-208ENST00000428693 DEPDC5O75140 1603 aa18.48■□□□□ 0.55
TTC3-208ENST00000428693 CPS1P31327 1500 aa18.48■□□□□ 0.55
TTC3-208ENST00000428693 ARHGAP31Q2M1Z3 1444 aa18.48■□□□□ 0.55
TTC3-208ENST00000428693 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
TTC3-208ENST00000428693 TOM1O60784 492 aa18.47■□□□□ 0.55
TTC3-208ENST00000428693 MED14O60244 1454 aa18.46■□□□□ 0.55
TTC3-208ENST00000428693 VWDEQ8N2E2 1590 aa18.44■□□□□ 0.54
TTC3-208ENST00000428693 ANKRD50Q9ULJ7 1429 aa18.44■□□□□ 0.54
TTC3-208ENST00000428693 LTKP29376 864 aa18.44■□□□□ 0.54
TTC3-208ENST00000428693 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
TTC3-208ENST00000428693 SCAF11Q99590 1463 aaKnown RBP18.44■□□□□ 0.54
TTC3-208ENST00000428693 IDI1Q13907 227 aa18.43■□□□□ 0.54
TTC3-208ENST00000428693 BCANQ96GW7 911 aa18.43■□□□□ 0.54
TTC3-208ENST00000428693 PIK3C2BO00750 1634 aa18.42■□□□□ 0.54
TTC3-208ENST00000428693 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.54
TTC3-208ENST00000428693 TMEM2Q9UHN6 1383 aa18.39■□□□□ 0.53
TTC3-208ENST00000428693 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.53
TTC3-208ENST00000428693 CHGAP10645 457 aaKnown RBP18.38■□□□□ 0.53
TTC3-208ENST00000428693 HSPA1LP34931 641 aa18.38■□□□□ 0.53
TTC3-208ENST00000428693 SLIT1O75093 1534 aa18.38■□□□□ 0.53
TTC3-208ENST00000428693 ARHGAP23Q9P227 1491 aa18.37■□□□□ 0.53
TTC3-208ENST00000428693 STRCP1A6NGW2 1772 aa18.36■□□□□ 0.53
TTC3-208ENST00000428693 SYNMO15061 1565 aa18.36■□□□□ 0.53
TTC3-208ENST00000428693 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
TTC3-208ENST00000428693 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
TTC3-208ENST00000428693 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
TTC3-208ENST00000428693 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
TTC3-208ENST00000428693 PPP1R15AO75807 674 aaPredicted RBP18.34■□□□□ 0.53
TTC3-208ENST00000428693 NOS1P29475 1434 aa18.33■□□□□ 0.53
TTC3-208ENST00000428693 ADGRB3O60242 1522 aa18.31■□□□□ 0.52
TTC3-208ENST00000428693 TET3O43151 1660 aa18.31■□□□□ 0.52
TTC3-208ENST00000428693 NUP155O75694 1391 aa18.3■□□□□ 0.52
TTC3-208ENST00000428693 ROCK1Q13464 1354 aa18.3■□□□□ 0.52
TTC3-208ENST00000428693 RPRD2Q5VT52 1461 aaKnown RBP18.3■□□□□ 0.52
TTC3-208ENST00000428693 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
TTC3-208ENST00000428693 KDM5AP29375 1690 aaKnown RBP18.28■□□□□ 0.52
TTC3-208ENST00000428693 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
TTC3-208ENST00000428693 NUTM2DQ5VT03 806 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms