RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
CSTF1-203ENST00000428552 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
CSTF1-203ENST00000428552 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
CSTF1-203ENST00000428552 PZPP20742 1482 aa13.26□□□□□ -0.29
CSTF1-203ENST00000428552 DHX29Q7Z478 1369 aaKnown RBP13.26□□□□□ -0.29
CSTF1-203ENST00000428552 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
CSTF1-203ENST00000428552 TNRQ92752 1358 aa13.26□□□□□ -0.29
CSTF1-203ENST00000428552 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
CSTF1-203ENST00000428552 MED14O60244 1454 aa13.25□□□□□ -0.29
CSTF1-203ENST00000428552 RTEL1-TNFRSF6BF6WH68 1400 aa13.25□□□□□ -0.29
CSTF1-203ENST00000428552 TOM1O60784 492 aa13.25□□□□□ -0.29
CSTF1-203ENST00000428552 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
CSTF1-203ENST00000428552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
CSTF1-203ENST00000428552 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
CSTF1-203ENST00000428552 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
CSTF1-203ENST00000428552 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
CSTF1-203ENST00000428552 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
CSTF1-203ENST00000428552 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
CSTF1-203ENST00000428552 MIA2Q96PC5 1412 aa13.21□□□□□ -0.3
CSTF1-203ENST00000428552 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
CSTF1-203ENST00000428552 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
CSTF1-203ENST00000428552 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
CSTF1-203ENST00000428552 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
CSTF1-203ENST00000428552 KIF3BO15066 747 aa13.19□□□□□ -0.3
CSTF1-203ENST00000428552 ANKLE2Q86XL3 938 aa13.19□□□□□ -0.3
CSTF1-203ENST00000428552 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
CSTF1-203ENST00000428552 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
CSTF1-203ENST00000428552 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
CSTF1-203ENST00000428552 CEP162Q5TB80 1403 aa13.17□□□□□ -0.3
CSTF1-203ENST00000428552 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
CSTF1-203ENST00000428552 ZC3H13Q5T200 1668 aaKnown RBP13.17□□□□□ -0.3
CSTF1-203ENST00000428552 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
CSTF1-203ENST00000428552 SYNMO15061 1565 aa13.16□□□□□ -0.3
CSTF1-203ENST00000428552 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
CSTF1-203ENST00000428552 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
CSTF1-203ENST00000428552 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
CSTF1-203ENST00000428552 ABCC3O15438 1527 aa13.13□□□□□ -0.31
CSTF1-203ENST00000428552 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
CSTF1-203ENST00000428552 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
CSTF1-203ENST00000428552 MROH1Q8NDA8 1641 aa13.12□□□□□ -0.31
CSTF1-203ENST00000428552 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
CSTF1-203ENST00000428552 ERVK-7P63135 1459 aa13.11□□□□□ -0.31
CSTF1-203ENST00000428552 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
CSTF1-203ENST00000428552 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
CSTF1-203ENST00000428552 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
CSTF1-203ENST00000428552 LTKP29376 864 aa13.07□□□□□ -0.32
CSTF1-203ENST00000428552 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
CSTF1-203ENST00000428552 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
CSTF1-203ENST00000428552 SLIT1O75093 1534 aa13.07□□□□□ -0.32
CSTF1-203ENST00000428552 MAST1Q9Y2H9 1570 aa13.07□□□□□ -0.32
CSTF1-203ENST00000428552 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
CSTF1-203ENST00000428552 CEP152O94986 1710 aa13.06□□□□□ -0.32
CSTF1-203ENST00000428552 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
CSTF1-203ENST00000428552 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
CSTF1-203ENST00000428552 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
CSTF1-203ENST00000428552 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
CSTF1-203ENST00000428552 ARHGAP31Q2M1Z3 1444 aa13□□□□□ -0.33
CSTF1-203ENST00000428552 TSPY4P0CV99 314 aa13□□□□□ -0.33
CSTF1-203ENST00000428552 TSPY10P0CW01 314 aa13□□□□□ -0.33
CSTF1-203ENST00000428552 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
CSTF1-203ENST00000428552 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
CSTF1-203ENST00000428552 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
CSTF1-203ENST00000428552 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
CSTF1-203ENST00000428552 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
CSTF1-203ENST00000428552 TET3O43151 1660 aa12.99□□□□□ -0.33
CSTF1-203ENST00000428552 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
CSTF1-203ENST00000428552 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
CSTF1-203ENST00000428552 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
CSTF1-203ENST00000428552 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
CSTF1-203ENST00000428552 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
CSTF1-203ENST00000428552 KDM5AP29375 1690 aaKnown RBP12.95□□□□□ -0.34
CSTF1-203ENST00000428552 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
CSTF1-203ENST00000428552 KCNA6P17658 529 aa12.93□□□□□ -0.34
CSTF1-203ENST00000428552 EFCAB6Q5THR3 1501 aa12.93□□□□□ -0.34
CSTF1-203ENST00000428552 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
CSTF1-203ENST00000428552 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
CSTF1-203ENST00000428552 NKTRP30414 1462 aaKnown RBP12.91□□□□□ -0.34
CSTF1-203ENST00000428552 MYOM3Q5VTT5 1437 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 IDI1Q13907 227 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 KANK4Q5T7N3 995 aaPredicted RBP12.91□□□□□ -0.34
CSTF1-203ENST00000428552 SLC26A8Q96RN1 970 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 CROCC2H7BZ55 1655 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 LMTK2Q8IWU2 1503 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
CSTF1-203ENST00000428552 ABCC5O15440 1437 aa12.9□□□□□ -0.34
CSTF1-203ENST00000428552 LRP6O75581 1613 aa12.9□□□□□ -0.34
CSTF1-203ENST00000428552 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
CSTF1-203ENST00000428552 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-203ENST00000428552 NOS1P29475 1434 aa12.88□□□□□ -0.35
CSTF1-203ENST00000428552 ADGRB3O60242 1522 aa12.88□□□□□ -0.35
CSTF1-203ENST00000428552 JCADQ9P266 1359 aa12.88□□□□□ -0.35
CSTF1-203ENST00000428552 VPS8Q8N3P4 1428 aa12.88□□□□□ -0.35
CSTF1-203ENST00000428552 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
CSTF1-203ENST00000428552 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
CSTF1-203ENST00000428552 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
CSTF1-203ENST00000428552 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSTF1-203ENST00000428552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSTF1-203ENST00000428552 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
CSTF1-203ENST00000428552 MSH6P52701 1360 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms