RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 PPP6R1Q9UPN7 881 aa26.31■■□□□ 1.8
LIMS2-211ENST00000426981 CROCC2H7BZ55 1655 aa26.3■■□□□ 1.8
LIMS2-211ENST00000426981 STRCQ7RTU9 1775 aa26.29■■□□□ 1.8
LIMS2-211ENST00000426981 DAPK1P53355 1430 aa26.29■■□□□ 1.8
LIMS2-211ENST00000426981 ILDR1Q86SU0 546 aaPredicted RBP26.29■■□□□ 1.8
LIMS2-211ENST00000426981 NPATQ14207 1427 aa26.28■■□□□ 1.8
LIMS2-211ENST00000426981 DNMT1P26358 1616 aaKnown RBP26.28■■□□□ 1.8
LIMS2-211ENST00000426981 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
LIMS2-211ENST00000426981 CHIC2Q9UKJ5 165 aa26.27■■□□□ 1.8
LIMS2-211ENST00000426981 FBXO31Q5XUX0 539 aaPredicted RBP26.26■■□□□ 1.79
LIMS2-211ENST00000426981 WASHC2CQ9Y4E1 1318 aa26.25■■□□□ 1.79
LIMS2-211ENST00000426981 CENPBP07199 599 aaPredicted RBP26.24■■□□□ 1.79
LIMS2-211ENST00000426981 SCAF1Q9H7N4 1312 aaKnown RBP26.24■■□□□ 1.79
LIMS2-211ENST00000426981 KDM5DQ9BY66 1539 aa26.23■■□□□ 1.79
LIMS2-211ENST00000426981 SHANK2Q9UPX8 1470 aa26.23■■□□□ 1.79
LIMS2-211ENST00000426981 FAM50AQ14320 339 aaKnown RBP26.23■■□□□ 1.79
LIMS2-211ENST00000426981 KIF15Q9NS87 1388 aa26.23■■□□□ 1.79
LIMS2-211ENST00000426981 RNF17Q9BXT8 1623 aaKnown RBP26.22■■□□□ 1.79
LIMS2-211ENST00000426981 DUOX2Q9NRD8 1548 aa26.21■■□□□ 1.79
LIMS2-211ENST00000426981 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
LIMS2-211ENST00000426981 MYO3AQ8NEV4 1616 aa26.21■■□□□ 1.79
LIMS2-211ENST00000426981 EIF2AK4Q9P2K8 1649 aaKnown RBP26.19■■□□□ 1.78
LIMS2-211ENST00000426981 ACIN1Q9UKV3 1341 aaKnown RBP26.18■■□□□ 1.78
LIMS2-211ENST00000426981 CAMSAP1Q5T5Y3 1602 aa26.16■■□□□ 1.78
LIMS2-211ENST00000426981 ABCC3O15438 1527 aa26.16■■□□□ 1.78
LIMS2-211ENST00000426981 PZPP20742 1482 aa26.16■■□□□ 1.78
LIMS2-211ENST00000426981 CEP170BQ9Y4F5 1589 aaPredicted RBP26.15■■□□□ 1.78
LIMS2-211ENST00000426981 CEP152O94986 1710 aa26.14■■□□□ 1.78
LIMS2-211ENST00000426981 ZNF142P52746 1687 aaPredicted RBP26.14■■□□□ 1.78
LIMS2-211ENST00000426981 NCOA1Q15788 1441 aa26.14■■□□□ 1.77
LIMS2-211ENST00000426981 FAM135AQ9P2D6 1515 aa26.14■■□□□ 1.77
LIMS2-211ENST00000426981 TNRQ92752 1358 aa26.13■■□□□ 1.77
LIMS2-211ENST00000426981 NCKAP5LQ9HCH0 1330 aa26.12■■□□□ 1.77
LIMS2-211ENST00000426981 DIEXFQ68CQ4 756 aaKnown RBP26.12■■□□□ 1.77
LIMS2-211ENST00000426981 ANKRD30AQ9BXX3 1397 aa26.11■■□□□ 1.77
LIMS2-211ENST00000426981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.11■■□□□ 1.77
LIMS2-211ENST00000426981 ERBINQ96RT1 1412 aa26.11■■□□□ 1.77
LIMS2-211ENST00000426981 CFAP65Q6ZU64 1925 aaKnown RBP26.1■■□□□ 1.77
LIMS2-211ENST00000426981 ZC3H13Q5T200 1668 aaKnown RBP26.08■■□□□ 1.77
LIMS2-211ENST00000426981 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
LIMS2-211ENST00000426981 A2ML1A8K2U0 1454 aa26.07■■□□□ 1.76
LIMS2-211ENST00000426981 ADGRL2O95490 1459 aa26.06■■□□□ 1.76
LIMS2-211ENST00000426981 PTPRTO14522 1441 aa26.05■■□□□ 1.76
LIMS2-211ENST00000426981 PRDM15P57071 1507 aaPredicted RBP26.05■■□□□ 1.76
LIMS2-211ENST00000426981 DEPDC5O75140 1603 aa26.03■■□□□ 1.76
LIMS2-211ENST00000426981 CERKQ8TCT0 537 aa26.02■■□□□ 1.76
LIMS2-211ENST00000426981 ITGAEP38570 1179 aa26.01■■□□□ 1.75
LIMS2-211ENST00000426981 ERVK-7P63135 1459 aa26.01■■□□□ 1.75
LIMS2-211ENST00000426981 FBXO41Q8TF61 875 aa26.01■■□□□ 1.75
LIMS2-211ENST00000426981 SPATA31D1Q6ZQQ2 1576 aa26■■□□□ 1.75
LIMS2-211ENST00000426981 PLA2R1Q13018 1463 aa25.99■■□□□ 1.75
LIMS2-211ENST00000426981 ZNF316A6NFI3 1004 aaPredicted RBP25.97■■□□□ 1.75
LIMS2-211ENST00000426981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.96■■□□□ 1.75
LIMS2-211ENST00000426981 NLRP1Q9C000 1473 aa25.96■■□□□ 1.75
LIMS2-211ENST00000426981 ANKRD50Q9ULJ7 1429 aa25.95■■□□□ 1.75
LIMS2-211ENST00000426981 PKD2Q13563 968 aa25.95■■□□□ 1.74
LIMS2-211ENST00000426981 VWDEQ8N2E2 1590 aa25.94■■□□□ 1.74
LIMS2-211ENST00000426981 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
LIMS2-211ENST00000426981 KANK1Q14678 1352 aa25.94■■□□□ 1.74
LIMS2-211ENST00000426981 ARHGAP31Q2M1Z3 1444 aa25.92■■□□□ 1.74
LIMS2-211ENST00000426981 LTBP4Q8N2S1 1624 aa25.92■■□□□ 1.74
LIMS2-211ENST00000426981 MYT1Q01538 1121 aa25.91■■□□□ 1.74
LIMS2-211ENST00000426981 ZNF335Q9H4Z2 1342 aaPredicted RBP25.91■■□□□ 1.74
LIMS2-211ENST00000426981 NEURL4Q96JN8 1562 aa25.9■■□□□ 1.74
LIMS2-211ENST00000426981 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
LIMS2-211ENST00000426981 LMTK2Q8IWU2 1503 aa25.89■■□□□ 1.74
LIMS2-211ENST00000426981 POLR1AO95602 1720 aaPredicted RBP25.88■■□□□ 1.73
LIMS2-211ENST00000426981 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
LIMS2-211ENST00000426981 ROCK1Q13464 1354 aa25.87■■□□□ 1.73
LIMS2-211ENST00000426981 ANKLE2Q86XL3 938 aa25.85■■□□□ 1.73
LIMS2-211ENST00000426981 UBR1Q8IWV7 1749 aa25.84■■□□□ 1.73
LIMS2-211ENST00000426981 NEUROD1Q13562 356 aa25.84■■□□□ 1.73
LIMS2-211ENST00000426981 EFCAB6Q5THR3 1501 aa25.84■■□□□ 1.73
LIMS2-211ENST00000426981 RRBP1Q9P2E9 1410 aaKnown RBP25.83■■□□□ 1.73
LIMS2-211ENST00000426981 SYNMO15061 1565 aa25.81■■□□□ 1.72
LIMS2-211ENST00000426981 UNC13BO14795 1591 aa25.81■■□□□ 1.72
LIMS2-211ENST00000426981 PIK3C2BO00750 1634 aa25.81■■□□□ 1.72
LIMS2-211ENST00000426981 IDI1Q13907 227 aa25.8■■□□□ 1.72
LIMS2-211ENST00000426981 NOS1P29475 1434 aa25.78■■□□□ 1.72
LIMS2-211ENST00000426981 NPHP4O75161 1426 aaPredicted RBP25.77■■□□□ 1.72
LIMS2-211ENST00000426981 LTKP29376 864 aa25.76■■□□□ 1.71
LIMS2-211ENST00000426981 TET3O43151 1660 aa25.76■■□□□ 1.71
LIMS2-211ENST00000426981 MED14O60244 1454 aa25.75■■□□□ 1.71
LIMS2-211ENST00000426981 IQGAP1P46940 1657 aa25.72■■□□□ 1.71
LIMS2-211ENST00000426981 ARHGAP23Q9P227 1491 aa25.72■■□□□ 1.71
LIMS2-211ENST00000426981 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
LIMS2-211ENST00000426981 STAG3Q9UJ98 1225 aa25.71■■□□□ 1.71
LIMS2-211ENST00000426981 NUP155O75694 1391 aa25.71■■□□□ 1.71
LIMS2-211ENST00000426981 GCC2Q8IWJ2 1684 aa25.71■■□□□ 1.71
LIMS2-211ENST00000426981 E9PCH4 1651 aa25.7■■□□□ 1.71
LIMS2-211ENST00000426981 SLIT1O75093 1534 aa25.7■■□□□ 1.71
LIMS2-211ENST00000426981 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
LIMS2-211ENST00000426981 SCAF11Q99590 1463 aaKnown RBP25.69■■□□□ 1.7
LIMS2-211ENST00000426981 RPRD2Q5VT52 1461 aaKnown RBP25.69■■□□□ 1.7
LIMS2-211ENST00000426981 GTF3C3Q9Y5Q9 886 aa25.68■■□□□ 1.7
LIMS2-211ENST00000426981 TMEM2Q9UHN6 1383 aa25.67■■□□□ 1.7
LIMS2-211ENST00000426981 NAIPQ13075 1403 aa25.66■■□□□ 1.7
LIMS2-211ENST00000426981 STRCP1A6NGW2 1772 aa25.65■■□□□ 1.7
LIMS2-211ENST00000426981 MYO5BQ9ULV0 1848 aa25.65■■□□□ 1.7
LIMS2-211ENST00000426981 SLC52A1Q9NWF4 448 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms