RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
SBDSP1-202ENST00000423945 PTPRKQ15262 1439 aa27.73■■■□□ 2.03
SBDSP1-202ENST00000423945 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
SBDSP1-202ENST00000423945 DUOX2Q9NRD8 1548 aa27.72■■■□□ 2.03
SBDSP1-202ENST00000423945 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
SBDSP1-202ENST00000423945 MROH1Q8NDA8 1641 aa27.71■■■□□ 2.03
SBDSP1-202ENST00000423945 STRCQ7RTU9 1775 aa27.68■■■□□ 2.02
SBDSP1-202ENST00000423945 KIF15Q9NS87 1388 aa27.68■■■□□ 2.02
SBDSP1-202ENST00000423945 MYO3AQ8NEV4 1616 aa27.66■■■□□ 2.02
SBDSP1-202ENST00000423945 RRP7BPQ9NSQ0 103 aa27.65■■■□□ 2.02
SBDSP1-202ENST00000423945 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
SBDSP1-202ENST00000423945 CHIC2Q9UKJ5 165 aa27.63■■■□□ 2.01
SBDSP1-202ENST00000423945 WASHC2CQ9Y4E1 1318 aa27.63■■■□□ 2.01
SBDSP1-202ENST00000423945 ZNF142P52746 1687 aaPredicted RBP27.62■■■□□ 2.01
SBDSP1-202ENST00000423945 ABCC3O15438 1527 aa27.62■■■□□ 2.01
SBDSP1-202ENST00000423945 ERBINQ96RT1 1412 aa27.62■■■□□ 2.01
SBDSP1-202ENST00000423945 FAM50AQ14320 339 aaKnown RBP27.62■■■□□ 2.01
SBDSP1-202ENST00000423945 PZPP20742 1482 aa27.62■■■□□ 2.01
SBDSP1-202ENST00000423945 ADGRL2O95490 1459 aa27.61■■■□□ 2.01
SBDSP1-202ENST00000423945 ZC3H13Q5T200 1668 aaKnown RBP27.61■■■□□ 2.01
SBDSP1-202ENST00000423945 NCOA1Q15788 1441 aa27.6■■■□□ 2.01
SBDSP1-202ENST00000423945 CEP152O94986 1710 aa27.59■■■□□ 2.01
SBDSP1-202ENST00000423945 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
SBDSP1-202ENST00000423945 ANKRD30AQ9BXX3 1397 aa27.59■■■□□ 2.01
SBDSP1-202ENST00000423945 PRDM15P57071 1507 aaPredicted RBP27.57■■■□□ 2
SBDSP1-202ENST00000423945 CEP170BQ9Y4F5 1589 aaPredicted RBP27.57■■■□□ 2
SBDSP1-202ENST00000423945 DEPDC5O75140 1603 aa27.57■■■□□ 2
SBDSP1-202ENST00000423945 CAMSAP1Q5T5Y3 1602 aa27.54■■■□□ 2
SBDSP1-202ENST00000423945 FBXO41Q8TF61 875 aa27.54■■■□□ 2
SBDSP1-202ENST00000423945 TNRQ92752 1358 aa27.52■■■□□ 2
SBDSP1-202ENST00000423945 A2ML1A8K2U0 1454 aa27.5■■□□□ 1.99
SBDSP1-202ENST00000423945 SPATA31D1Q6ZQQ2 1576 aa27.48■■□□□ 1.99
SBDSP1-202ENST00000423945 VWDEQ8N2E2 1590 aa27.48■■□□□ 1.99
SBDSP1-202ENST00000423945 CFAP65Q6ZU64 1925 aaKnown RBP27.46■■□□□ 1.99
SBDSP1-202ENST00000423945 ERVK-7P63135 1459 aa27.45■■□□□ 1.99
SBDSP1-202ENST00000423945 PTPRTO14522 1441 aa27.45■■□□□ 1.98
SBDSP1-202ENST00000423945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.45■■□□□ 1.98
SBDSP1-202ENST00000423945 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
SBDSP1-202ENST00000423945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.98
SBDSP1-202ENST00000423945 ARHGAP31Q2M1Z3 1444 aa27.42■■□□□ 1.98
SBDSP1-202ENST00000423945 ANKRD50Q9ULJ7 1429 aa27.42■■□□□ 1.98
SBDSP1-202ENST00000423945 DMRT2Q9Y5R5 561 aa27.42■■□□□ 1.98
SBDSP1-202ENST00000423945 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
SBDSP1-202ENST00000423945 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
SBDSP1-202ENST00000423945 NLRP1Q9C000 1473 aa27.4■■□□□ 1.98
SBDSP1-202ENST00000423945 ROCK1Q13464 1354 aa27.39■■□□□ 1.98
SBDSP1-202ENST00000423945 RRBP1Q9P2E9 1410 aaKnown RBP27.39■■□□□ 1.97
SBDSP1-202ENST00000423945 KANK1Q14678 1352 aa27.36■■□□□ 1.97
SBDSP1-202ENST00000423945 UGGT1Q9NYU2 1555 aa27.35■■□□□ 1.97
SBDSP1-202ENST00000423945 ITGAEP38570 1179 aa27.34■■□□□ 1.97
SBDSP1-202ENST00000423945 UNC13BO14795 1591 aa27.33■■□□□ 1.97
SBDSP1-202ENST00000423945 EFCAB6Q5THR3 1501 aa27.32■■□□□ 1.96
SBDSP1-202ENST00000423945 PKD2Q13563 968 aa27.32■■□□□ 1.96
SBDSP1-202ENST00000423945 POLR1AO95602 1720 aaPredicted RBP27.32■■□□□ 1.96
SBDSP1-202ENST00000423945 NEURL4Q96JN8 1562 aa27.31■■□□□ 1.96
SBDSP1-202ENST00000423945 UBR1Q8IWV7 1749 aa27.3■■□□□ 1.96
SBDSP1-202ENST00000423945 CERKQ8TCT0 537 aa27.29■■□□□ 1.96
SBDSP1-202ENST00000423945 LTBP4Q8N2S1 1624 aa27.29■■□□□ 1.96
SBDSP1-202ENST00000423945 SYNMO15061 1565 aa27.26■■□□□ 1.96
SBDSP1-202ENST00000423945 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.95
SBDSP1-202ENST00000423945 TET3O43151 1660 aa27.26■■□□□ 1.95
SBDSP1-202ENST00000423945 NOS1P29475 1434 aa27.24■■□□□ 1.95
SBDSP1-202ENST00000423945 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
SBDSP1-202ENST00000423945 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
SBDSP1-202ENST00000423945 IQGAP3Q86VI3 1631 aa27.21■■□□□ 1.95
SBDSP1-202ENST00000423945 MED14O60244 1454 aa27.19■■□□□ 1.94
SBDSP1-202ENST00000423945 ZNF335Q9H4Z2 1342 aaPredicted RBP27.18■■□□□ 1.94
SBDSP1-202ENST00000423945 ANKLE2Q86XL3 938 aa27.18■■□□□ 1.94
SBDSP1-202ENST00000423945 RPRD2Q5VT52 1461 aaKnown RBP27.18■■□□□ 1.94
SBDSP1-202ENST00000423945 E9PCH4 1651 aa27.17■■□□□ 1.94
SBDSP1-202ENST00000423945 ARHGAP23Q9P227 1491 aa27.17■■□□□ 1.94
SBDSP1-202ENST00000423945 KDM5AP29375 1690 aaKnown RBP27.15■■□□□ 1.94
SBDSP1-202ENST00000423945 IDI1Q13907 227 aa27.15■■□□□ 1.94
SBDSP1-202ENST00000423945 SLIT1O75093 1534 aa27.15■■□□□ 1.94
SBDSP1-202ENST00000423945 NPHP4O75161 1426 aaPredicted RBP27.14■■□□□ 1.93
SBDSP1-202ENST00000423945 NAIPQ13075 1403 aa27.14■■□□□ 1.93
SBDSP1-202ENST00000423945 IQGAP1P46940 1657 aa27.13■■□□□ 1.93
SBDSP1-202ENST00000423945 NUP155O75694 1391 aa27.12■■□□□ 1.93
SBDSP1-202ENST00000423945 LTKP29376 864 aa27.09■■□□□ 1.93
SBDSP1-202ENST00000423945 ADGRB3O60242 1522 aa27.09■■□□□ 1.93
SBDSP1-202ENST00000423945 SCAF11Q99590 1463 aaKnown RBP27.08■■□□□ 1.93
SBDSP1-202ENST00000423945 TMEM2Q9UHN6 1383 aa27.07■■□□□ 1.92
SBDSP1-202ENST00000423945 MYO5BQ9ULV0 1848 aa27.06■■□□□ 1.92
SBDSP1-202ENST00000423945 SLC52A1Q9NWF4 448 aa27.06■■□□□ 1.92
SBDSP1-202ENST00000423945 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
SBDSP1-202ENST00000423945 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
SBDSP1-202ENST00000423945 TXNDC2Q86VQ3 553 aa27.02■■□□□ 1.92
SBDSP1-202ENST00000423945 STRCP1A6NGW2 1772 aa27.02■■□□□ 1.92
SBDSP1-202ENST00000423945 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.92
SBDSP1-202ENST00000423945 STAG3Q9UJ98 1225 aa27.01■■□□□ 1.91
SBDSP1-202ENST00000423945 CPS1P31327 1500 aa26.97■■□□□ 1.91
SBDSP1-202ENST00000423945 SPHKAPQ2M3C7 1700 aa26.96■■□□□ 1.91
SBDSP1-202ENST00000423945 EID1Q9Y6B2 187 aa26.95■■□□□ 1.9
SBDSP1-202ENST00000423945 ZFYVE9O95405 1425 aa26.94■■□□□ 1.9
SBDSP1-202ENST00000423945 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.89
SBDSP1-202ENST00000423945 LRRC7Q96NW7 1537 aa26.85■■□□□ 1.89
SBDSP1-202ENST00000423945 CHGAP10645 457 aaKnown RBP26.85■■□□□ 1.89
SBDSP1-202ENST00000423945 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
SBDSP1-202ENST00000423945 CLTCL1P53675 1640 aa26.85■■□□□ 1.89
SBDSP1-202ENST00000423945 TRPM2O94759 1503 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms